KEGG   Mycobacterium sp. MOTT36Y: W7S_18845Help
Entry
W7S_18845         CDS       T02113                                 

Gene name
ligB
Definition
(GenBank) ATP-dependent DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mmm  Mycobacterium sp. MOTT36Y
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmm00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    W7S_18845 (ligB)
   03410 Base excision repair
    W7S_18845 (ligB)
   03420 Nucleotide excision repair
    W7S_18845 (ligB)
   03430 Mismatch repair
    W7S_18845 (ligB)
Enzymes [BR:mmm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     W7S_18845 (ligB)
    6.5.1.6  DNA ligase (ATP or NAD+)
     W7S_18845 (ligB)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     W7S_18845 (ligB)
DNA replication proteins [BR:mmm03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    W7S_18845 (ligB)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     W7S_18845 (ligB)
DNA repair and recombination proteins [BR:mmm03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     W7S_18845 (ligB)
   NER (nucleotide excision repair)
    Other NER factors
     W7S_18845 (ligB)
   MMR (mismatch exicision repair)
    Other MMR factors
     W7S_18845 (ligB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
4157880..4159409
Genome map
AA seq 509 aa AA seqDB search
MLLLDVAKASTDVGSTSSRLRKVAHIADLLARAAPDPALVMIVVSWLSGELRQRQIGVGW
AALRSRPPPASHATLTVGAVDATFSEIGAVSGKGAQARRAALLTTLFAAATEAEQTFLLR
LLGGELRQGALAGIMADAVAKAAGIPAAAVQRAAMLGGDLPAVAAAALSGEPAALQAFTL
RVGRPVGPMLAQTAPSVADAIERHGGRAIFEAKLDGARVQIHRSGDQVTVYTRSLDDVTA
RVPEVVEATLALPVNDLIADGEAIALRPDNRPQRFQVTASRFGRSVDVAAAVAAQPLSVF
FFDILHRDGVDLLDAPTTDRLAALDALVPPAQRVDRLLTSDPVEAGAFLDATLAVGHEGV
MAKAPDAQYQAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRRGKLSNIHLGARDPDSGEF
VMVGKTFKGMTDAMLDWQTARFTDLAIGGTDGYVVHVRPEQVVEVALDGVQKSSRYPGGL
ALRFARVVRYRDDKGPAEADTIDAVRALY
NT seq 1530 nt NT seq  +upstreamnt  +downstreamnt
gtgctcctcctcgacgtggcaaaggcgtccaccgacgtcggaagcacgtcgtcgcggctg
agaaaagtcgcccacatcgccgacctactggcgcgggccgcacccgatcccgccctcgtc
atgatcgtcgtgtcctggctgtccggcgagttgcgccagcgccagatcggggtcggctgg
gcggcgttgcgctcgcgcccgccgccggcctcccacgccacgctgaccgtgggcgccgtc
gacgccaccttctccgagatcggcgccgtgtccggcaaaggcgcacaggcgcgccgcgcc
gcgctccttaccaccctgttcgccgccgccaccgaagccgagcagacgttcctgctgcga
ctgctcggcggcgaactgcgccagggcgcgctggccggaatcatggccgacgccgtggcc
aaggccgccgggatcccggcggccgctgtgcagcgggccgcgatgctgggcggggacctg
cccgcggtcgcggcggcggccctgtccggcgaacccgccgccctgcaggccttcaccctg
cgcgtcggccgcccggtcggcccgatgctggcgcagacggcgcccagtgtggccgacgcg
atcgaacgccacggcgggcgggcgattttcgaggccaagctggacggggcgcgagtgcag
atccaccgctccggcgaccaggtcaccgtctacacccgaagcctcgacgatgtcaccgcc
cgggtgcccgaggtggtggaggcgacgctggcgctgccggtgaacgacctgatcgccgac
ggcgaggcgatcgcgctgcggcccgacaaccggccgcagcgcttccaggtcaccgcctcc
cggttcggccgctcggtcgatgtcgccgcggccgttgccgcgcaaccactttcggtgttc
ttcttcgacatcctgcaccgcgacggcgtcgacctgctcgacgcgccgaccaccgaccgg
ctggccgccctggacgcgttggtgccgcccgcgcagcgggtcgatcggctgctcacctcc
gaccccgtggaggccggcgccttcctggacgcgacgctggccgtcggccacgagggtgtg
atggccaaggcgccggacgcgcagtatcaggccggccgccgcggggcgggctggctgaag
gtcaagccggtgcacaccctggacctggtggtgctggccgtggaatgggggtcggggcgc
cgccgcggcaagctttccaacatccatctgggcgcccgcgacccggacagcggcgaattc
gtcatggtaggaaagactttcaagggcatgaccgacgccatgctggactggcagaccgcc
cggttcaccgacctggcgatcggcgggacggacggctacgtcgtgcacgtaagacccgag
caggtggtcgaggtggccctggacggcgtgcagaaatcgtcgcgctaccccggcgggctg
gcgctgcggttcgcccgcgtggtgcggtatcgcgacgacaagggccccgccgaggccgac
accatcgacgccgtgcgcgcgctgtactag

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