Marmota marmota marmota (Alpine marmot): 107140899
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Entry
107140899 CDS
T09644
Symbol
Col4a1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04151
PI3K-Akt signaling pathway
mmma04510
Focal adhesion
mmma04512
ECM-receptor interaction
mmma04820
Cytoskeleton in muscle cells
mmma04926
Relaxin signaling pathway
mmma04933
AGE-RAGE signaling pathway in diabetic complications
mmma04974
Protein digestion and absorption
mmma05146
Amoebiasis
mmma05165
Human papillomavirus infection
mmma05200
Pathways in cancer
mmma05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107140899 (Col4a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107140899 (Col4a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107140899 (Col4a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107140899 (Col4a1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
107140899 (Col4a1)
09154 Digestive system
04974 Protein digestion and absorption
107140899 (Col4a1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107140899 (Col4a1)
09162 Cancer: specific types
05222 Small cell lung cancer
107140899 (Col4a1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107140899 (Col4a1)
09174 Infectious disease: parasitic
05146 Amoebiasis
107140899 (Col4a1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107140899 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mmma04147
]
107140899 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
mmma00536
]
107140899 (Col4a1)
Exosome [BR:
mmma04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107140899 (Col4a1)
Glycosaminoglycan binding proteins [BR:
mmma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107140899 (Col4a1)
BRITE hierarchy
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107140899
NCBI-ProteinID:
XP_015339566
Ensembl:
ENSMMMG00000020115
UniProt:
A0A8C6A145
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search
MGPRLGVWLLLLPVALLLHEERSRAAAKGGCDGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFSGNPGPPGLPGMKGDPGEILGLGYVPGMLLKGERGFP
GAPGIPGSPGLPGLQGPVGPPGSPGLPGPPGPPGPPGEKGQMGSSFQGPKGDKGDQGVSG
PPGMPGQAQVKEKGDFAPTGEKGQKGEPGFQGIPGIGEKGEPGKPGPRGKPGKDGDKGER
GSPGFPGEPGYPGLPGPQGPQGDKGEAGPPGPPGIVIGTGPLGEKGERGYPGAPGLRGEP
GPKGYPGLQGQPGPPGFPVPGQPGAPGFPGERGEKGDRGYPGTSLPGLSGKDGVPGPPGL
PGPPGQPGHTNGIVECQPGPPGDQGPPGTPGQPGLTGEVGEKGQKGDSCLICDTEGLRGP
PGPQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLMGPPGAKGEPGEIYFDIR
LKGDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGAGFPGSRG
DIGPPGPPGFGPIGPVGDKGQPGFPGSPGSPGLPGPKGEAGKVVPLPGPPGAEGLPGSPG
FPGPQGDRGFPGTPGRPGLQGEKGSVGQPGIGFPGPPGPKGVDGLPGDVGAPGSPGRPGF
NGLPGSPGLQGQKGEPGIGLPGLKGLPGLPGIPGTPGEKGNIGGPGVPGEHGAIGPPGLQ
GIRGDPGPPGVQGPAGPPGAPGIGPPGVMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDM
PGPKGDKGSQGLPGLTGQSGLPGLPGQQGTPGIPGFPGPKGEMGVMGTPGQPGSPGPAGA
PGLPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMEKVDMGSMKGQKGDQGEKGQ
IGPTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGVSGTPGAPGLPGPKGAVGGMGL
PGTPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGAAGFPGSP
GEKGEKGSIGIPGMPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGVPGVKGEAGLP
GQPGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGSKGDKGSKGEVGFPGLAG
SPGIPGPKGEQGFMGPPGPQGQPGLPGSPGRPVEGPKGDRGPQGQPGLPGLPGPMGPPGL
PGLDGLKGDKGNPGWPGAPGIPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGQ
KGLPGLQGLKGDQGDQGVPGPKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGPPG
PKGQQGVAGSVGLPGPPGAPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPG
TPSVDHGFLVTRHSQTTDDPSCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFS
TMPFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVM
AVHSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHG
RGTCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atggggccccggctcggcgtctggctgctgctgctgcccgtcgcccttctgctccacgag
gagcgcagccgggccgctgcgaagggtggttgtgatggctctggctgtggaaaatgtgac
tgccatggagtgaagggacaaaagggggaacgaggtctcccagggctacaaggtgtcatt
gggtttcctggaatgcaaggacccgaggggccgcagggaccaccgggacagaagggtgac
actggagaacctggacttcctggcacaaaagggacaagaggacccccaggagcagctggc
tatccgggaaacccaggacttccgggtattcctggccaagatggtcccccaggtccccca
ggtatcccgggatgcaacggtaccaaaggagagagaggaccacttgggcctcctggtttg
cctggattctctggaaatcctggaccaccagggttacctggaatgaagggggatccaggt
gaaatactgggcttgggctacgtgcctgggatgctgctgaaaggggaaagaggatttcct
ggcgccccggggattccaggctcgccgggattgccaggactgcagggacccgttggccct
ccaggatctcctggactaccaggccccccgggtcctcctgggcctccaggtgaaaagggg
caaatgggctcaagttttcaaggaccaaaaggtgacaagggtgaccaaggtgtcagtggg
cctcccgggatgccaggacaggcacaagttaaagaaaaaggggactttgccccgacggga
gaaaagggtcaaaaaggtgaacctggatttcaggggataccagggattggcgagaagggc
gaacccggaaagcccgggcctcggggaaaacctggaaaagatggtgacaaaggagagaga
gggagtccgggctttcctggcgagccagggtacccaggactccccggcccacagggccct
cagggagacaaaggtgaagccggtcctccgggcccccctggaattgttataggcacagga
cctctgggagaaaaaggggagcgaggctacccaggggctcccgggctgagaggagagcca
ggcccgaaaggttacccgggattacaaggccagccgggccctccaggcttccctgtacct
ggacagcctggtgctcctggcttccctggagaaagaggagaaaaaggagaccgaggatat
ccaggaacatctttgccagggctgagcggaaaggatggagtcccaggccccccaggtctc
ccgggaccccctgggcagccaggacacacaaatggcattgtggaatgtcagcctggacca
cctggtgatcagggtcctcccgggactccagggcagccagggttgacaggagaggtggga
gaaaaaggtcagaaaggagacagctgcctcatttgtgacacagagggacttcgagggccg
cccgggccacagggtcccccaggagaaatcggttttccgggacagccaggggccaagggc
gacagaggtctacccggcagggatggtcttgaaggattgcctgggcctcaaggtgcacca
gggctgatgggcccgccgggcgccaagggagagcctggcgagatttacttcgacatacga
ctcaaaggcgacaaaggagaccccggtttcccaggacagcccggcatgccagggagagca
gggtcccctgggagagacggccatcccggtcttccaggccccaagggctccccgggctcc
gtaggattgaagggagaacgtggtccccctggaggagctggcttccccggcagccgtggt
gacatcggcccccctgggcctcccggatttggtccgattggccccgttggtgacaaagga
caacctggttttcctggaagccctgggtcccccggcctgccaggtccaaagggtgaagca
ggcaaggtggttcccttacctggacccccaggagcagaaggcctcccagggtccccagga
ttcccagggccccaaggtgaccgaggcttccctggaacccctggacggccaggcctccag
ggagagaagggctctgtaggccagccggggattggatttcctgggcctcccggccccaaa
ggtgtcgatggcttacctggagacgtgggagctcctgggagtccaggtcgcccggggttt
aatggcttacctggtagccctggtttgcagggccaaaagggagaacctggcattggtctg
ccaggactcaagggacttccaggtcttcccggcattcctggcacaccgggggagaagggc
aacattggaggaccaggcgttcctggagaacacggggccatcggcccacctgggcttcag
gggatcagaggtgaccccggaccccctggagtacaaggcccagcaggaccacccggagct
cccggaataggcccccctggagttatgggcccgcctggaggacagggaccaccagggtca
tcaggtccccctggagtcaaaggagagaaaggcttccctggattcccaggcctcgacatg
cccggccctaaaggagacaaagggtctcaaggacttcccggcctcacaggacagtcaggg
ctgcctggccttcccggacagcagggcacacctggaattccagggttcccaggtcccaag
ggagaaatgggtgtcatggggaccccagggcagccaggctcaccaggacccgcaggtgcc
ccaggactacctggagaaaaaggggaccacggcttcccaggctcctcaggacccaggggg
gaccctggcttcaaaggcgacaaaggggatgttgggctccctggaaaaccagggtctatg
gagaaagtggacatgggcagcatgaagggacagaagggagaccaaggagaaaaaggacaa
attggacccactggtgacaaaggatcccgaggagaccctgggacaccaggagtgcctggg
aaggatgggcaggccgggcaccccggacagccagggcctaagggtgaccccggcgtaagt
ggaacaccaggggctccaggactccctggaccgaaaggagccgttggtggcatgggcttg
ccagggacacctggggaaaagggcgtgcccggcatccccggcccacagggcgtccccggc
ttgcctggagagaaaggggccaaaggagagaaggggcaggcgggtctccccggcattggg
attcctgggcggcccggcgacaagggagaccagggagcagcagggttcccaggaagccct
ggagagaagggagagaagggcagcatcgggattccaggaatgccggggtctccgggccca
aaggggtctccagggagtgttggttatccaggaagccctgggttgcctggggagaagggt
gacaaaggccttccgggactggacggtgtccctggtgtcaaaggagaagcaggtcttcct
ggacagcctggccccacaggcccagccggacagaaaggggagccaggcagtgacggaatt
ccaggatcggcaggagagaagggtgaaccaggtctaccaggaagagggttccccgggttt
ccagggagcaaaggagacaaaggttcaaagggagaagtggggttccctggattagctggg
agtcccggaattcctggacccaaaggcgagcaaggattcatgggtcctccggggccccaa
ggacagccaggcttaccaggcagtcctggccgccccgtggagggccccaaaggggaccga
ggacctcagggacaacctggcctgccagggcttccgggacctatggggcctccagggctt
cctgggcttgatgggctaaagggtgacaagggaaatccaggatggccaggagcacccggc
attccagggcccaagggagatccagggttccagggcatgccgggcattggtggctctcct
ggaatcacaggttccaagggtgatatggggcctccaggagttccaggatttcaaggtcaa
aagggtcttcctggcctccaggggctgaagggagatcagggagatcaaggcgtccccggc
cctaaaggtctcccaggcccccctggccctccaggtccttacgatatcatcaagggggag
ccaggactccctggtcctgagggtccgccaggtctgaaagggcttcagggccctccgggt
cccaaagggcagcaaggtgtggccggctcggtgggcttgcctggacccccaggtgcccct
ggctttgacggtgcccctggccagaaaggagagacgggacctttcgggcctcctggtcca
agagggtttcctggcccacccggccctgatggattgccaggatccatggggcccccaggc
accccatccgtcgaccacggcttcctcgtgaccaggcacagtcagacaacagatgaccca
tcatgtcctcctgggaccaaaatcctttaccacgggtactcccttctctacgtgcagggg
aacgagcgagcccatggccaggatctgggcacggccggcagctgcctgcgcaagttcagc
acgatgcccttcctgttctgcaacatcaacaacgtgtgcaacttcgcctcccgcaacgac
tactcctactggctgtccacgccggagcccatgcccatgtccatggcgcccatcactggg
gacaacatccggccgtttatcagcagatgtgccgtgtgcgaggcgccagccatggtgatg
gccgtgcatagtcagaccattcagatcccgcagtgccccaacgggtggtcgtcgctgtgg
attggctattccttcgtgatgcacaccagtgctggtgctgaaggttctggccaagccctg
gcgtcccccggctcctgtctggaagagttcagaagcgcaccgttcatcgagtgtcatggg
cgtgggacctgtaattactatgcaaacgcttacagcttttggctcgccaccatagagaga
agcgagatgttcaagaagcccacaccatccaccttgaaggcaggggagctacgcacacac
gtcagccgctgccaagtttgtatgagaagaacataa
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integrated database retrieval system
