Marmota marmota marmota (Alpine marmot): 107150457
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Entry
107150457 CDS
T09644
Symbol
Col1a1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04151
PI3K-Akt signaling pathway
mmma04510
Focal adhesion
mmma04512
ECM-receptor interaction
mmma04611
Platelet activation
mmma04820
Cytoskeleton in muscle cells
mmma04926
Relaxin signaling pathway
mmma04933
AGE-RAGE signaling pathway in diabetic complications
mmma04974
Protein digestion and absorption
mmma05146
Amoebiasis
mmma05165
Human papillomavirus infection
mmma05205
Proteoglycans in cancer
mmma05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107150457 (Col1a1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107150457 (Col1a1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107150457 (Col1a1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107150457 (Col1a1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
107150457 (Col1a1)
09152 Endocrine system
04926 Relaxin signaling pathway
107150457 (Col1a1)
09154 Digestive system
04974 Protein digestion and absorption
107150457 (Col1a1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
107150457 (Col1a1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107150457 (Col1a1)
09174 Infectious disease: parasitic
05146 Amoebiasis
107150457 (Col1a1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
107150457 (Col1a1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107150457 (Col1a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mmma00536
]
107150457 (Col1a1)
Glycosaminoglycan binding proteins [BR:
mmma00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107150457 (Col1a1)
BRITE hierarchy
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
107150457
NCBI-ProteinID:
XP_015350975
Ensembl:
ENSMMMG00000022693
LinkDB
All DBs
Position
Unknown
AA seq
1462 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQTEGEVNDQEGDIPGVDCIQNGLRRAHNDVWKPTPCQI
CLCHNGEVMCDEVVCPNDAKCPGGQIPPGECCPVCPDDAASPTDQDLTGVEGPKGDTGPR
GPRGPAGPPGRDGIPGNPGLPGPPGPPGPPGPPGLGGNFASQMSYGYDEKSAGVSVPGPM
GPSGPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRP
GERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQM
GPRGLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGAR
GSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQ
GPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGVQGPPGPAGEEGKRGARGEPGPAGLP
GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLT
GSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVP
GPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQ
GVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGSNGAPGNDGAKGDAGAPGAPGSQ
GAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDK
GETGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPP
GPAGPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPA
GKEGGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVV
GLPGQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGAPGAE
GSPGRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPA
GARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPR
GPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFM
PQPPQEKAGDGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDL
KMCHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPTVAQKNWYISNNHKEKR
HVWFGESMTGGFQFEYGSEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTG
NLKKSLLLQGSNEIELRGEGNSRFTYSTIYDGCTSHTGAWGKTIIEYKTTKTSRLPIIDV
APLDIGAPDQEFGMDIGPACFV
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaaacggaaggcgaggtcaatgaccaagagggagacatcccaggagtcgactgc
atacagaacggcctcaggcgcgctcataacgatgtctggaaacccacgccctgccagatc
tgcctgtgccacaacggcgaagtgatgtgcgacgaagtggtctgtcctaatgacgccaag
tgtccgggaggccaaatcccccctggcgagtgctgtcctgtctgccccgacgacgccgca
tcacccacggaccaagacctcacaggagttgagggacccaagggagacactggcccccgc
ggcccaaggggacccgcaggcccccctggacgagatggcatccctggaaatcctggactt
cccgggcctcccggaccccctggaccccctggaccccctggccttggaggaaacttcgct
tcccaaatgtcttatggctatgatgaaaaatcagctggagtgtccgtgcctggccccatg
ggtccctctggtcctcgtggtctccctggccctcctggcgcacctggtccccaaggtttc
caaggcccccctggtgagcccggcgagcctggagcttcaggtcccatgggtccccgaggt
ccccctggcccccctggcaagaacggagatgatggtgaagctggcaaacctggtcgtcct
ggtgagcgtggacctcctgggcctcagggtgctcgtggattgcctggaacagctggcctc
cctggaatgaagggacacagaggtttcagtggtttggatggtgccaagggagatgctggt
cctgctggtcccaagggtgagcctggtagccctggtgaaaatggagcccctggccagatg
ggcccccgtggtctgcctggtgagagaggtcgccctggagcccctggccctgctggtgca
cgtggaaatgatggtgctactggtgctgctggtcctcctggtcccactggccccgctggt
cctcctggtttccctggtgctgttggtgctaagggtgaagctggtccccaaggagcccga
ggctctgaaggtccccagggtgttcgtggtgagcctggcccccctggccctgctggtgct
gctggtcccgctggaaaccctggtgctgatggacaacctggtgctaaaggtgccaacggt
gctcccggtattgctggcgctcctggcttccctggtgcccgaggcccctctggaccccag
ggccccagcggtcctcctggtcccaagggtaacagcggtgaacctggtgctcctggcaac
aaaggagacactggtgccaaaggagaacccggccccactggtgttcaaggaccccctggc
cctgctggagaagaaggaaagcgaggagcccgaggtgaacctggacctgctggcctgcct
ggaccccctggcgagcgtggtggacctggtagccgtggtttccctggtgcagatggtgtc
gctggtcccaagggtcctgctggtgaacgtggttctcctggccctgctggtcccaaaggt
tctcctggtgaagctggtcgccctggtgaagctggcctgcctggtgccaagggtctgact
ggaagccctggcagccctggtcctgatggcaaaactggcccccctggtcccgctggtcaa
gatggtcgtcctggacccccaggtccccctggtgcccgtggtcaggctggtgtgatggga
ttccctggacctaaaggtgctgctggagaacctggcaaagctggagagcgtggtgttcct
ggaccccctggcgctgttggtcctgctggcaaagatggagaagcaggagctcagggaccc
cccggccctgctggtcccgctggtgagagaggtgaacaaggtcctgctggctcccctgga
ttccagggtctccctggccccgctggtcctcccggtgaagcaggcaaacctggtgaacag
ggtgttcctggagatcttggtgcccctggtccctctggagcaagaggcgagagaggtttc
cctggtgagcgtggtgtgcaaggtccccctggtcctgctggtcctcgtgggtccaacggt
gctcctggcaacgatggtgccaagggtgatgctggtgctcctggagctcccggaagccag
ggtgcccctggtcttcagggaatgcctggcgaacgtggtgcagctggtcttccaggcccc
aagggagacagaggtgatgctggtcccaaaggtgctgatggttctcctggcaaagatggc
gtccgtggtctgactggccccattggtcctcctggtcccgctggtgctcctggtgacaag
ggtgaaactggtcccagcggccctgctggccccaccggagcccgtggcgcccctggagat
cgtggtgaacctggtccccctggtcctgctggcttcgctggcccccctggtgctgatggt
caacctggtgctaaaggtgaacctggagatgctggtgctaaaggcgatgccggtcctcct
ggccctgctggacccgctgggccccccggccccattggtaacgttggtgctcctggaccc
aaaggtgctcgcggcagcgcgggtccccctggtgctactggtttccctggtgctgctggc
cgagtcggtccccctggcccctctggaaatgctggaccccctggtcctcctggccctgct
ggcaaagaaggcggcaaaggtccccgtggtgagactggtcccgctggacgtcctggtgaa
gttggtccccctggtccccctggccctgctggtgaaaaaggatcccctggtgctgacgga
cctgctggtgctcctggtacccctggacctcagggtattgctggacagcgtggtgtggtt
ggtctgcctggtcaaagaggagaaagaggcttccctggtcttcctggcccctcgggtgag
cccggcaaacaaggtccttctggagcaagtggtgaacgtggcccccctggccccatggga
ccccctggattagctggaccccctggtgaatctggacgtgagggagctcctggtgctgaa
ggatcccctggtcgagatggctctcctggccccaagggtgaccgtggtgagactggccct
gctggaccccctggtgctcctggtgctcctggtgctcccggccccgttggccctgctggc
aagagtggcgatcgtggtgagactggtcctgctggtcctgctggtcccatcggccccgct
ggtgcccgtggtcccgctggacctcaaggcccccgtggtgacaagggtgagacaggcgaa
cagggcgacagaggcataaagggtcaccgtggcttctccggtctccagggtcctcctggc
cctcctggctctcctggtgaacaaggtccctctggagcttctggtcctgctggtcctcgt
ggtccccccggctctgctggttctcctggcaaagatggactcaacggtcttccaggccca
attggtccccctggacctcgcggtcgcactggtgatgctggtcctgttggtccccccggc
cctcctggaccccctggtccccctggtcctcccagcggtggttttgacttcagcttcatg
ccccagccacctcaagagaaggctggtgatggccgctactaccgggctgatgatgccaat
gtggtccgtgaccgtgatcttgaagtggacacaaccctcaagagcctgagccagcagatc
gagaacatccgcagccctgaaggcagccgcaagaaccctgcccgcacctgccgggacctc
aagatgtgccactctgactggaagagcggagagtactggattgaccccaaccaaggctgc
aacctggatgccattaaggtcttctgcaacatggagacaggtgagacctgtgtgtacccc
acccagcccaccgtggcccagaagaactggtacatcagcaacaaccacaaggaaaagagg
catgtctggttcggcgagagcatgaccggtggattccagttcgagtatggcagcgagggc
tccgaccctgctgatgtggccatccaactgaccttcctgcgcctgatgtccacggaggcc
tcccagaacatcacctaccactgcaagaacagcgtggcctacatggaccagcagactggc
aacctcaagaagtccctgctcctccagggctccaacgagatcgaactccggggcgagggc
aacagccgcttcacctacagcaccatctatgacggctgcacgagtcacaccggagcctgg
ggcaagacaatcatcgaatacaaaaccaccaagacctcccgcctgcccatcatcgatgtg
gcccccttggacattggcgccccagaccaggaattcggcatggacattggccctgcctgc
ttcgtgtaa
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integrated database retrieval system
