Marmota marmota marmota (Alpine marmot): 107159163
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Entry
107159163 CDS
T09644
Symbol
Rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03320
PPAR signaling pathway
mmma04148
Efferocytosis
mmma04151
PI3K-Akt signaling pathway
mmma04659
Th17 cell differentiation
mmma04919
Thyroid hormone signaling pathway
mmma04920
Adipocytokine signaling pathway
mmma04928
Parathyroid hormone synthesis, secretion and action
mmma04932
Non-alcoholic fatty liver disease
mmma04976
Bile secretion
mmma05160
Hepatitis C
mmma05200
Pathways in cancer
mmma05202
Transcriptional misregulation in cancer
mmma05207
Chemical carcinogenesis - receptor activation
mmma05216
Thyroid cancer
mmma05222
Small cell lung cancer
mmma05223
Non-small cell lung cancer
mmma05226
Gastric cancer
mmma05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107159163 (Rxra)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107159163 (Rxra)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
107159163 (Rxra)
09152 Endocrine system
04920 Adipocytokine signaling pathway
107159163 (Rxra)
03320 PPAR signaling pathway
107159163 (Rxra)
04919 Thyroid hormone signaling pathway
107159163 (Rxra)
04928 Parathyroid hormone synthesis, secretion and action
107159163 (Rxra)
09154 Digestive system
04976 Bile secretion
107159163 (Rxra)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
107159163 (Rxra)
05202 Transcriptional misregulation in cancer
107159163 (Rxra)
05207 Chemical carcinogenesis - receptor activation
107159163 (Rxra)
09162 Cancer: specific types
05226 Gastric cancer
107159163 (Rxra)
05216 Thyroid cancer
107159163 (Rxra)
05222 Small cell lung cancer
107159163 (Rxra)
05223 Non-small cell lung cancer
107159163 (Rxra)
09172 Infectious disease: viral
05160 Hepatitis C
107159163 (Rxra)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
107159163 (Rxra)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
107159163 (Rxra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107159163 (Rxra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mmma03310
]
107159163 (Rxra)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
107159163 (Rxra)
Nuclear receptors [BR:
mmma03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
107159163 (Rxra)
BRITE hierarchy
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
107159163
NCBI-ProteinID:
XP_048669325
Ensembl:
ENSMMMG00000012890
LinkDB
All DBs
Position
Unknown
AA seq
461 aa
AA seq
DB search
MLSDFSSQVSSSSLSSPAGRGAMAAPSLHPSLGPGIGSSLGSPGQLHSPISTLSSPINGM
GPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSSMNPVSSSEDIKPPLGLNGVLKVPA
HPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK
RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELA
VEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL
RAGWNELLIASFSHRSIAVKDGILLATGLHVHRSSAHSAGVGAIFDRVLTELVSKMRDMQ
MDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR
LPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQTT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgctatctgacttctccagccaggtgagctcctcgtccctcagctccccggccggccga
ggcgccatggcggccccctcgctgcacccctccctggggccaggcatcggctcctcgctg
ggctcccctgggcagctgcactcgcccatcagcaccctgagctcccccatcaacggcatg
ggcccgcccttctcggtcatcagctcccccatgggcccccactccatgtctgtgcctacc
acgcccaccctgggcttcggcaccggcagcccccagctcaactcgtccatgaaccccgtc
agcagcagtgaggacatcaagcccccgctgggcctcaatggcgtcctcaaggtccctgcc
cacccctcaggaaacatggcgtctttcaccaagcatatctgtgccatctgtggggaccgc
tcctcaggcaagcactacggggtgtacagctgtgagggctgcaagggcttcttcaagagg
acagtgcgcaaggacctgacctacacctgccgtgacaacaaggactgcctgattgacaag
cggcagcggaaccggtgccagtactgccgctaccagaagtgcctggccatgggcatgaag
agggaagctgtgcaggaggagcggcagcggggcaaggaccggaacgagaacgaggtggag
tcaaccagcagcgccaacgaagacatgccagtggagaagattctggaagctgagttggct
gtcgagcccaagacggagacctacgtggaggcgaacatgggcctgaaccccagctcgccc
aatgaccccgtcaccaacatctgccaggccgctgacaagcagctcttcacgctggtggag
tgggccaagaggattccacacttctccgagctgcccctggacgaccaggtcatcctgctg
cgggcaggctggaacgagctgctcatcgcctccttctcccaccgctccatcgccgtgaag
gatgggatcctgctggccaccgggctgcacgtccacaggagcagtgcccacagcgcaggg
gtgggcgccatctttgacagggtgctgacggagctggtgtccaagatgcgggacatgcag
atggacaagaccgagctgggctgcctgcgggccatcgttctctttaaccccgactccaag
gggctctcgaacccggcggaggtggaggcgctgagggagaaggtgtacgcgtccctggag
gcttactgcaagcacaagtaccctgagcagcccggcaggtttgccaagctcctgctgcgc
ctgccggccctgcgctccatcgggctcaagtgcctggagcacctcttcttcttcaagctc
attggggacacgcccatcgacaccttcctcatggagatgctggaggccccacaccagacc
acctag
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integrated database retrieval system