KEGG   Marmota marmota marmota (Alpine marmot): 107159163
Entry
107159163         CDS       T09644                                 
Symbol
Rxra
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
  KO
K08524  retinoid X receptor alpha
Organism
mmma  Marmota marmota marmota (Alpine marmot)
Pathway
mmma03320  PPAR signaling pathway
mmma04148  Efferocytosis
mmma04151  PI3K-Akt signaling pathway
mmma04659  Th17 cell differentiation
mmma04919  Thyroid hormone signaling pathway
mmma04920  Adipocytokine signaling pathway
mmma04928  Parathyroid hormone synthesis, secretion and action
mmma04932  Non-alcoholic fatty liver disease
mmma04976  Bile secretion
mmma05160  Hepatitis C
mmma05200  Pathways in cancer
mmma05202  Transcriptional misregulation in cancer
mmma05207  Chemical carcinogenesis - receptor activation
mmma05216  Thyroid cancer
mmma05222  Small cell lung cancer
mmma05223  Non-small cell lung cancer
mmma05226  Gastric cancer
mmma05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mmma00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    107159163 (Rxra)
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    107159163 (Rxra)
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    107159163 (Rxra)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    107159163 (Rxra)
   03320 PPAR signaling pathway
    107159163 (Rxra)
   04919 Thyroid hormone signaling pathway
    107159163 (Rxra)
   04928 Parathyroid hormone synthesis, secretion and action
    107159163 (Rxra)
  09154 Digestive system
   04976 Bile secretion
    107159163 (Rxra)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    107159163 (Rxra)
   05202 Transcriptional misregulation in cancer
    107159163 (Rxra)
   05207 Chemical carcinogenesis - receptor activation
    107159163 (Rxra)
  09162 Cancer: specific types
   05226 Gastric cancer
    107159163 (Rxra)
   05216 Thyroid cancer
    107159163 (Rxra)
   05222 Small cell lung cancer
    107159163 (Rxra)
   05223 Non-small cell lung cancer
    107159163 (Rxra)
  09172 Infectious disease: viral
   05160 Hepatitis C
    107159163 (Rxra)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    107159163 (Rxra)
  09167 Endocrine and metabolic disease
   04932 Non-alcoholic fatty liver disease
    107159163 (Rxra)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mmma03000]
    107159163 (Rxra)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:mmma03310]
    107159163 (Rxra)
Transcription factors [BR:mmma03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    107159163 (Rxra)
Nuclear receptors [BR:mmma03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   107159163 (Rxra)
Motif
Pfam: Hormone_recep Nuc_recep-AF1 zf-C4 tRNA_bind_3
Other DBs
NCBI-GeneID: 107159163
NCBI-ProteinID: XP_048669325
Ensembl: ENSMMMG00000012890
LinkDB
Position
Unknown
AA seq 461 aa
MLSDFSSQVSSSSLSSPAGRGAMAAPSLHPSLGPGIGSSLGSPGQLHSPISTLSSPINGM
GPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSSMNPVSSSEDIKPPLGLNGVLKVPA
HPSGNMASFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK
RQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKILEAELA
VEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILL
RAGWNELLIASFSHRSIAVKDGILLATGLHVHRSSAHSAGVGAIFDRVLTELVSKMRDMQ
MDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLR
LPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQTT
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgctatctgacttctccagccaggtgagctcctcgtccctcagctccccggccggccga
ggcgccatggcggccccctcgctgcacccctccctggggccaggcatcggctcctcgctg
ggctcccctgggcagctgcactcgcccatcagcaccctgagctcccccatcaacggcatg
ggcccgcccttctcggtcatcagctcccccatgggcccccactccatgtctgtgcctacc
acgcccaccctgggcttcggcaccggcagcccccagctcaactcgtccatgaaccccgtc
agcagcagtgaggacatcaagcccccgctgggcctcaatggcgtcctcaaggtccctgcc
cacccctcaggaaacatggcgtctttcaccaagcatatctgtgccatctgtggggaccgc
tcctcaggcaagcactacggggtgtacagctgtgagggctgcaagggcttcttcaagagg
acagtgcgcaaggacctgacctacacctgccgtgacaacaaggactgcctgattgacaag
cggcagcggaaccggtgccagtactgccgctaccagaagtgcctggccatgggcatgaag
agggaagctgtgcaggaggagcggcagcggggcaaggaccggaacgagaacgaggtggag
tcaaccagcagcgccaacgaagacatgccagtggagaagattctggaagctgagttggct
gtcgagcccaagacggagacctacgtggaggcgaacatgggcctgaaccccagctcgccc
aatgaccccgtcaccaacatctgccaggccgctgacaagcagctcttcacgctggtggag
tgggccaagaggattccacacttctccgagctgcccctggacgaccaggtcatcctgctg
cgggcaggctggaacgagctgctcatcgcctccttctcccaccgctccatcgccgtgaag
gatgggatcctgctggccaccgggctgcacgtccacaggagcagtgcccacagcgcaggg
gtgggcgccatctttgacagggtgctgacggagctggtgtccaagatgcgggacatgcag
atggacaagaccgagctgggctgcctgcgggccatcgttctctttaaccccgactccaag
gggctctcgaacccggcggaggtggaggcgctgagggagaaggtgtacgcgtccctggag
gcttactgcaagcacaagtaccctgagcagcccggcaggtttgccaagctcctgctgcgc
ctgccggccctgcgctccatcgggctcaagtgcctggagcacctcttcttcttcaagctc
attggggacacgcccatcgacaccttcctcatggagatgctggaggccccacaccagacc
acctag

DBGET integrated database retrieval system