KEGG   Methanococcus maripaludis C5: MmarC5_0793
Entry
MmarC5_0793       CDS       T00491                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mmq  Methanococcus maripaludis C5
Pathway
mmq03030  DNA replication
mmq03410  Base excision repair
mmq03420  Nucleotide excision repair
mmq03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MmarC5_0793
   03410 Base excision repair
    MmarC5_0793
   03420 Nucleotide excision repair
    MmarC5_0793
   03430 Mismatch repair
    MmarC5_0793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmq03032]
    MmarC5_0793
   03400 DNA repair and recombination proteins [BR:mmq03400]
    MmarC5_0793
Enzymes [BR:mmq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MmarC5_0793
    6.5.1.6  DNA ligase (ATP or NAD+)
     MmarC5_0793
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MmarC5_0793
DNA replication proteins [BR:mmq03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MmarC5_0793
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MmarC5_0793
DNA repair and recombination proteins [BR:mmq03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MmarC5_0793
   NER (nucleotide excision repair)
    Other NER factors
     MmarC5_0793
   MMR (mismatch excision repair)
    Other MMR factors
     MmarC5_0793
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C Arc_PepC RNA_ligase
Other DBs
NCBI-ProteinID: ABO35103
UniProt: A4FY19
LinkDB
Position
761592..763313
AA seq 573 aa
MLFNDFCKILDKIEKTTKRLEKTDYFVELIDFIKTNGKPENLKQVSQITIGRVFAEFENK
EIGIGPNLLLEAVKTTGISEKDLKAEIKKTGDIGTAVENLSSNIKQVSLFSQPLTLEEMY
STLKKLSEIEGNSSQKKKIRIISNLLILANPVESRYISRLILEDMRIGMNIPTILASFSN
YFNVNKENVEKIYAVTNDIGLLGEKLISGSDIENDSELHLKVFRPIKPMLAQLTPSIEDA
IIETKIPQFETKYDGARVQVHKSNGEVKIYSRRLEDITNSVPELVEEIKKIDIDNIILEG
ECVAMDLSSGKPRPFQDILRRFRRKYDINKMAEKIALRIYFFDVLYYNRGLIDTPLRNRR
EILEKLFGTNDWDTELEKIEKEILSKKMLFSSFKLNSDDPNLAKEFFNWSLSIGHEGVMI
KNPDAPYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMGKRKDWYGSYEISVKDDESNLHV
IGNVGSGLTEDDLERLTKIVNEIKIEDLGEEVILEPKIVLEVTYEEIQTSEKYEMGYALR
FPRVVQIREDKSINDINTLDDVKKIYDIERNRK
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgctttttaatgatttttgtaaaattcttgataaaattgaaaaaactacgaaaaggctt
gaaaaaacagactattttgttgaattaatcgattttatcaaaactaatggaaaacctgaa
aatttaaaacaagtatcacaaattacaattggaagagtttttgcggaatttgaaaataaa
gaaatcggaattgggccaaatttattacttgaagcagtgaaaaccacaggaatttctgaa
aaagatttaaaagcagaaattaaaaagactggagatattggaactgctgttgaaaattta
agttcaaatataaaacaggtgtccttattcagccagccactaactcttgaagaaatgtac
tccacattaaaaaaactctcagaaattgaaggaaattcatctcaaaaaaagaaaataaga
ataatttcaaatctactaattttagcaaatcctgttgaatcaagatatatttcaaggctt
attttagaagatatgagaattggaatgaacattccaacaattttggcctcattttcaaat
tatttcaatgttaacaaggaaaatgtcgaaaaaatatatgctgttacaaacgatatcgga
cttttgggcgaaaagttgatttctggttcagacattgaaaacgattcagaattacattta
aaagtattcaggccaataaaaccgatgcttgcacagttaaccccctcaattgaagatgcg
ataatcgaaactaaaataccccaatttgaaacaaaatacgatggtgcaagagttcaagtg
cataaatcaaatggcgaagtaaagatatacagtagaaggcttgaagacattacaaattca
gttcccgaactcgttgaagagattaaaaaaatagatattgacaacatcattttagagggg
gaatgtgttgcaatggacttatcttctggaaaaccaaggccttttcaggacattttaaga
aggttcaggcgaaagtacgatatcaacaaaatggcggaaaaaatagctttaagaatatac
tttttcgatgttttatattacaaccgaggtttaatcgataccccactaagaaatagacga
gaaatcttagaaaaattatttggaacaaatgattgggatactgaactagaaaaaattgaa
aaagagattttgtccaaaaaaatgctgttttcgtcatttaaattaaatagcgatgatcca
aaccttgcaaaagaattttttaactggagtttgagtattggacatgaaggggtcatgatt
aaaaatcctgatgcaccatatacaccaggaagtagggttaaaacaatgtataaagttaaa
ccaacattggaaaatcttgatgtggttgtaactcgtgcaaaaattggaatgggaaaaaga
aaagactggtatggctcatatgaaatttctgtaaaagatgatgaaagtaatttacacgtt
attggaaacgttggaagtgggcttaccgaggacgatcttgaaagacttacaaaaatagtt
aatgaaataaaaattgaagatttaggcgaagaagtaattttagaacctaaaatagtactt
gaagtaacatatgaagaaattcaaacctctgaaaaatacgaaatgggttatgccctacgt
tttccaagagttgttcagataagggaagacaaatctataaatgacattaatacattagat
gatgtgaagaaaatatacgatatagaacgaaacagaaaataa

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