Mus musculus (house mouse): 231464
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Entry
231464 CDS
T01002
Symbol
Cnot6l, 4932442K20Rik
Name
(RefSeq) CCR4-NOT transcription complex, subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
231464 (Cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmu03019
]
231464 (Cnot6l)
Enzymes [BR:
mmu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
231464 (Cnot6l)
Messenger RNA biogenesis [BR:
mmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
231464 (Cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
231464 (Cnot6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
Motif
Other DBs
NCBI-GeneID:
231464
NCBI-ProteinID:
NP_849185
MGI:
2443154
Ensembl:
ENSMUSG00000034724
UniProt:
Q8VEG6
LinkDB
All DBs
Position
5:complement(96218192..96312044)
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AA seq
555 aa
AA seq
DB search
MRLIGMPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTA
LHLNDNNLARIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNDNYLRVLPYE
LGRLFQLQTLGLTGNPLSQDIMSLYQDPDGTRKLLNFMLDNLAVHPEQLPPRPWITLKER
DQILPSASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQE
VETEQYFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELFGTGMKPIHAADKQLLIVANAH
MHWDPEYSDVKLIQTMMFVSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLPDSGVV
EYLSNGGVADNHKDFKELRYNECLMNFSCSGKNGSSEGRITHGFQLKSAYENNLMPYTNY
TFDFKGVIDYIFYSKTHMNVLGVLGPLDPQWLVENNITGCPHPHIPSDHFSLLTQLELHP
PLLPLVNGVHLPNRR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagactaatagggatgccaaaggaaaaatatgatcctccagatcctcgcagaatttac
accatcatgtccgcagaggaggtagccaatgggaaaaaatctcactgggcagagttagag
atctcgggtagagtgcggagcttaagtacatcactctggtcattaacacacttgacagca
ctgcacctaaatgacaataaccttgctcgcattccacctgatattgccaagcttcataat
ctggtttacctggatctgtcatccaataaactcagaagtttaccagcagaactaggaaac
atggtgtctctcagggaattgcttttaaatgacaattatttacgggtgttgccttatgaa
cttggccggctcttccagctacaaactctaggtttaacaggcaatcctttatcacaggat
attatgagcttataccaggacccagatggaacccgaaagctactgaacttcatgcttgac
aatcttgcagttcatccagagcagcttcctccgaggccatggattacattaaaagaacga
gaccaaattctgccatcagcatcattcacggttatgtgttacaatgtgttatgtgataaa
tatgctaccaggcagctatatggctattgtccgtcctgggcattaaactgggaatacagg
aaaaagggaattatggaagaaattgttaactgggacgcagatatcattagtcttcaggaa
gtggaaacagagcaatactttactctctttctgccagcattgaaggatcgtggatatgat
ggatttttttctccaaagtcacgtgccaaaatcatgtctgagcaggaaagaaagcatgtg
gatggttgtgcaatattcttcaaaacagaaaaatttacattggtgcagaagcatacagtg
gaattcaaccaggtagcaatggcaaattcagatggatccgaagcaatgctaaacagagta
atgacgaaagataacattggcgttgctgtggtgttagaggtccacaaggagctttttgga
acaggtatgaagcctattcatgctgcagacaaacagctgcttatagtggcaaatgcccac
atgcattgggacccagagtattctgatgtgaaacttattcagaccatgatgtttgtctca
gaggttaaaaacattctggagaaagcctcaagtaggcctggcagcccaactgcagatccc
aattccatcccgctggtgctatgtgcagatcttaactcattgccagattcaggtgttgtg
gaatatttaagcaacggtggagtagctgacaaccataaagacttcaaggaactaaggtac
aatgagtgtcttatgaacttcagctgtagtggaaagaatggaagctcagaagggagaatc
acacatggcttccaacttaagagcgcctatgaaaataacttgatgccttataccaattac
acctttgatttcaaaggtgtgattgactacattttctattccaagactcatatgaacgtg
cttggtgtcctggggcctttagatcctcaatggctggttgagaacaacatcactgggtgt
ccacaccctcacatcccttcagaccacttctcactgttaacacaacttgaactccaccct
ccactcctgcctcttgtcaatggtgttcacttgcctaatcggaggtag
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integrated database retrieval system