Mycobacteroides abscessus subsp. massiliense GO 06: MYCMA_0206
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Entry
MYCMA_0206 CDS
T02177
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mmv
Mycobacteroides abscessus subsp. massiliense GO 06
Pathway
mmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MYCMA_0206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmv03400
]
MYCMA_0206
Enzymes [BR:
mmv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MYCMA_0206
DNA repair and recombination proteins [BR:
mmv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MYCMA_0206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFN62380
LinkDB
All DBs
Position
4306059..4309292
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AA seq
1077 aa
AA seq
DB search
MALHLRRAERTDMLADGLARLLAEPAPDPFAEELVLVPAKGIERWLSQRLSDRLGVCAGV
RFRSPRSLIAEITGTVDHDPWSPAALVWPLLAVIDENLDQSWAVPLASHLGAFETGEERE
LRQGRRYAVARRLAGLFASYARQRPELLVSWLDGDPAEPDLAWQPPLWRALVARVDAVPP
HVRHNQVRARLREAPSDLPPRISLFGHTRLPVTDVELLDALATHHDLYLWLPHPSDALWQ
TLASDRGPVPRREDIAHRSVRHPLLATLGRDVRELQRALPVPTSDEYLSGTTFSDSLLGW
LQSDLAADEVRPQGRALAAHDHTVQVHSCHGPARQIDVLREVLLGLLADDPTLEPRDILV
MCPDIETYAPLISARFGLGESVPGAHPAHQLRVRLADRALVQTNPLLTVAGQILSLASGR
ATASEVLNLAEATPVRMRFGFTDDDLDAITAWVREANIRWGFDPEHRAPYGVDFLHNTWR
FGIDRVLAGVALSEDAHAWLGATLPLDDVSSNRVELAGRFAEFVSQLHTTVTALSGTRPL
AEWLSILSTGIDALATDSEDWPRAQMLREFSEIQDAAVPVSLRLSDIRALLDRHLAGRPT
RANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGVFPRLGAVDGDDALARDPMTGERDIRS
EDRQLLLDAIGAATETLVLTYTGANEYSGQARPPAVPLAELLDTLDITTSRPVRDRIHIT
HPLQPFDIRNVTPGGVIPGHPFTFDGTALIAARAAAGARAERPPFICGPLPALDVTDVAL
TDLAAFFNHPIKGFFRALDYTLPWDVDGVSDDMPVEIDALEEWTVGDRLLADMLRGMTPT
DAQQAEWRRGTLPPGQLGWRRVSELRDRCAALAAETRGYQTDDSRAFDIDIDLGDGRRVT
GTVSPVFGERLVSVTYSRLDAKHLLQSWITLVALSAHDHQRDWSAVCIGRARRGPQPLVR
SLGRPTDPLGVLRDLVAIYDAGRREPLPLPLKTSYAWAQARRDRDDPELQAGYRWRSGNF
PGEDADPAVERAFGQGVWLRHLMQPLRPGEETEGETNRLGAYSARLWLPLLRAEHGA
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcacctgcgccgggccgagcggaccgacatgctcgccgacgggctcgcccgg
ctgctggccgagcccgctccggatccctttgccgaggagttggtgctggtaccggcgaag
ggcatcgagcggtggctcagccagcggttatccgacaggctcggggtgtgtgcgggcgtg
cgatttcgcagcccgcgctcactgatcgccgagatcaccggaaccgtcgaccacgacccg
tggtcacccgctgcgctggtgtggccgctgctggcggtgatcgacgagaacctggaccag
tcctgggccgtcccgctggcctcgcacctcggggcgttcgagaccggcgaggaacgtgag
ctgcgccagggccgccgctacgcggtggcccggcgccttgcggggctgttcgcgtcctat
gcgcgtcagcgtccggagctgttggtctcctggctcgacggtgacccggcggaaccggat
ctggcgtggcagccgccgttgtggcgcgcgctggtggcgcgggtcgacgcggttcccccg
catgttcgacacaaccaggtccgtgctcgcctgcgcgaggcgccgtcggatctgccaccg
cgcatatccctgttcgggcatacgcggctccccgtcaccgatgtcgaactgctcgatgcc
ctggcgacgcatcacgacctgtacttgtggctaccgcaccccagcgatgcgctatggcag
acgttggcgagcgaccgcggcccggtcccgcggcgcgaggacatcgcgcatcgttcggtc
cgtcatccactactggccacgctgggacgcgatgtccgtgaattgcagcgcgccctgccc
gtaccaacgtcagatgaatatctgagtggcacaacattttcagactcgctgttgggttgg
ctgcagtccgacctggcggccgacgaggtgcgtccccagggccgggcgctcgcggcgcac
gatcatacggtgcaggtgcattcctgccacggcccggcacgtcagatcgatgtgctacgc
gaggtgctgctgggcctgcttgccgacgaccccacactggagccgcgggacatcctcgtc
atgtgcccggacatcgaaacctatgcgccgttgatatcggcccgttttggtctcggtgag
tcggtaccgggcgcccacccggcccatcagttacgggtccggctcgccgatcgtgctctg
gtgcaaaccaatccgctactgacggtggccgggcagatactgagtctggccagtgggcgc
gccaccgccagcgaggtcctgaacctcgccgaggcgacgccggtgcggatgcgtttcggc
ttcaccgacgacgacctggacgcgatcaccgcgtgggtgcgcgaggcgaacatccggtgg
ggtttcgacccggaacatcgcgcgccgtacggagtcgacttcctgcacaacacctggcgt
ttcggtatcgatcgggtacttgccggggtggcgctgtccgaggacgcgcatgcctggctg
ggtgccacgctgccgctcgacgatgtgagcagcaatcgggtcgagctggccggccgcttc
gcggagttcgtctctcagctccacaccacggtgaccgcgttgagcggcacccggcccttg
gccgagtggctgagcattctgtcgacgggtatcgatgctctcgccacggattcagaagat
tggccccgcgcccagatgttacgcgagttctccgagattcaggatgcggccgtgccggtc
tcgttgcggctcagcgatattcgcgcactcctggatcgccacctggcgggccgccccacg
cgcgccaactttcgcaccggcaccctcacggtctgcaccatggtgcccatgcggtcggtc
ccgcatcgggtcgtctgtctcgtcgggctcgacgacggcgtgttcccgcggctcggcgcc
gtcgacggagatgacgccctggcgcgcgacccgatgaccggtgaacgcgatatccgttcc
gaagatcgacagttgcttctggacgcgatcggcgccgctaccgaaaccctggtactcacc
tataccggagccaacgagtactcgggacaggcgcgtccccccgccgtaccgctggccgag
ttgctggacacgttggatatcacgacgtcgcggccggtccgtgatcggatccacatcacc
cacccgttgcagccgttcgatattcgcaatgtgacgcccggcggcgtgattcccgggcat
ccgttcacctttgatggcaccgcgctgatcgcggcccgcgccgccgcgggagcgcgggcc
gagcggccgccgttcatctgcggcccattgcccgccctcgatgtcaccgacgtggcattg
actgatctcgctgccttcttcaatcatcccatcaagggtttcttccgcgccctggactac
accctgccgtgggatgtggatggggtatccgacgacatgccggtcgagatcgacgccctc
gaagagtggacggtaggcgatcgcctactggccgacatgctgcgcggtatgacaccgacc
gatgcgcagcaggccgaatggcgccgtggcactttacctcccggacagctcggctggcgg
cgggtctccgagttgcgggaccgctgcgcggcgctggccgcggagaccaggggctaccaa
accgatgacagtcgagcctttgacatcgatatcgatctcggtgacgggcgccgcgtcacc
ggcaccgtgtccccggtgttcggtgaacggctggtgtcggtcacctattcgcggctcgac
gccaagcatctgctgcaatcgtggattacgttggtggcgttgagcgcccacgatcatcag
cgggactggtcggcggtatgcatcggccgcgcccgccgaggtccgcaaccgctggtacgc
agcctcggacgacccacggatccactgggcgtattgcgtgacctagtggccatctacgac
gcgggccgccgggagccgctgcccttgccgctgaagacctcctacgcgtgggcgcaggct
cgccgcgatcgtgatgaccccgagctgcaggccggataccgctggcgttccggcaacttt
ccgggcgaagacgcggaccctgccgtcgaacgtgccttcggccagggggtctggttgcgg
catctgatgcagccgctgcggcccggggaagagaccgagggggaaacgaaccgcctcggt
gcgtattccgcgcggttgtggttgccgttgctacgggcggagcacggcgcatga
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