KEGG   Methanococcus maripaludis C6: MmarC6_1685
Entry
MmarC6_1685       CDS       T00615                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mmx  Methanococcus maripaludis C6
Pathway
mmx03030  DNA replication
mmx03410  Base excision repair
mmx03420  Nucleotide excision repair
mmx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mmx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MmarC6_1685
   03410 Base excision repair
    MmarC6_1685
   03420 Nucleotide excision repair
    MmarC6_1685
   03430 Mismatch repair
    MmarC6_1685
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mmx03032]
    MmarC6_1685
   03400 DNA repair and recombination proteins [BR:mmx03400]
    MmarC6_1685
Enzymes [BR:mmx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MmarC6_1685
    6.5.1.6  DNA ligase (ATP or NAD+)
     MmarC6_1685
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MmarC6_1685
DNA replication proteins [BR:mmx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    MmarC6_1685
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     MmarC6_1685
DNA repair and recombination proteins [BR:mmx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MmarC6_1685
   NER (nucleotide excision repair)
    Other NER factors
     MmarC6_1685
   MMR (mismatch excision repair)
    Other MMR factors
     MmarC6_1685
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: ABX02497
UniProt: A9AAX4
LinkDB
Position
complement(1583851..1585572)
AA seq 573 aa
MLFIDFCKILDKIEKTTKRLEKTDYFVELIDFIKNNGKAENLKQVSQITIGRVFAEFENK
EIGIGPNLLIEAVKTTGISEKDLKAEIKKTGDIGIAVENLSSNIKQVSLFSQPLTLEEIY
STLKKLSEIEGNSSQKKKTRIISNLLILSNPVESRYISRLILEDMRIGMNIPTILASFSN
YFNVNKEAVEKIYAVTNDIGLIGKKLISGSDIENDSELKLKVFRPIKPMLAQLTPSIEDA
IIETKMPQFETKYDGARVQVHKSNGKVNIYSRRLENITNSVPELVEEINKIDIDNIILEG
ECVAMDLSSGKPRPFQDILRRFRRKYDIDKVAEKIALRIYFFDVLYYEKGLIDTPLKNRR
EILEKLFGTNNWDSELEKIQKEIFSNKMLFSSFKLNSDDPDLAKEFFNWSLSIGHEGIMI
KNPDAPYTPGSRVKTMYKVKPTLENLDVVVTRAKIGMGKRKDWYGSYEISVKDDEDNLHV
IGNVGSGLTEDDLERLTTIVNEIKIEDLGEEVILEPKIVLEVTYEEIQTSEKYEMGYALR
FPRVVQIREDKSINDINTLDDVKKIYEIERNRK
NT seq 1722 nt   +upstreamnt  +downstreamnt
atgctttttattgatttttgtaaaattcttgataaaattgaaaaaactacgaaaaggctt
gaaaaaacagactattttgttgaattaatcgattttattaaaaataatggaaaagctgaa
aatttaaaacaagtgtctcaaatcacgattggaagagtttttgcagaatttgaaaataaa
gaaattgggattggaccaaatttattgattgaggcagtaaaaacaactggaatttctgaa
aaagatttaaaagcagaaatcaaaaaaacaggggacattggaattgctgttgaaaattta
agttcaaatataaaacaggtgtcactattcagccagcccctcacactcgaagagatatac
tccacattaaaaaaactctcagaaattgaaggaaactcatcccaaaaaaagaaaactaga
ataatttcaaatttactaattttatcaaatcctgttgaatcaagatacatttcaagactt
attttagaggatatgagaattggaatgaatattccaacaattttggcctcgttttcaaat
tattttaatgttaataaggaagctgttgaaaagatatatgctgtaacaaacgatatcgga
cttatcggtaaaaagttgatttctggatcagacattgaaaacgattcagaattaaaatta
aaagtatttcgaccaataaaaccgatgcttgcacagttaaccccctcaattgaagatgcg
ataatcgaaactaaaatgccgcaatttgaaacaaaatacgacggtgcaagggttcaggtg
cataaatcgaatggaaaggtaaatatatacagcagaagacttgaaaacattacaaattca
gttccagaactcgttgaagagattaacaaaatagatattgataatatcattttagaagga
gaatgcgttgcaatggacctatcttctggaaagccaaggccgttccaggacattttaaga
aggttcaggcgaaagtacgatatagacaaagtggcggaaaaaatagctttgagaatatac
tttttcgatgttttatattatgaaaaaggtttaatcgatactccgttaaaaaatagaaga
gaaattttggaaaaattatttggaacaaataattgggatagtgaactagaaaagattcaa
aaagagattttttcgaacaaaatgctcttttcgtcatttaaattaaatagcgatgatcca
gatcttgcaaaagaattttttaactggagtttaagtatcgggcatgagggaatcatgatt
aaaaaccctgatgccccatacacaccaggaagtcgtgttaaaacaatgtataaagttaaa
ccaactttggaaaatcttgatgtggttgtaactcgtgcaaaaattggaatgggaaaaaga
aaagactggtacggctcatatgaaatttctgtaaaagatgatgaagataatctgcacgtc
attggaaacgttggaagtggacttactgaagacgaccttgaaagacttacaacaattgtt
aatgaaataaaaattgaagatttaggcgaagaagtaattttagaacccaaaatagtactt
gaagtaacatatgaagaaattcaaacctctgaaaaatacgaaatgggttatgctcttcgt
tttccaagagttgttcaaataagggaagacaaatctataaatgacattaatacattagat
gatgtgaagaaaatatacgaaatagaacgaaacagaaaataa

DBGET integrated database retrieval system