Miniopterus natalensis (Natal long-fingered bat): 107539184
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Entry
107539184 CDS
T05883
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna04151
PI3K-Akt signaling pathway
mna04510
Focal adhesion
mna04512
ECM-receptor interaction
mna04611
Platelet activation
mna04820
Cytoskeleton in muscle cells
mna04926
Relaxin signaling pathway
mna04933
AGE-RAGE signaling pathway in diabetic complications
mna04974
Protein digestion and absorption
mna05146
Amoebiasis
mna05165
Human papillomavirus infection
mna05205
Proteoglycans in cancer
mna05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
107539184 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107539184 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107539184 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107539184 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
107539184 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
107539184 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
107539184 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
107539184 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
107539184 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
107539184 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
107539184 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
107539184 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mna00536
]
107539184 (COL1A1)
Glycosaminoglycan binding proteins [BR:
mna00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107539184 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
107539184
NCBI-ProteinID:
XP_016071097
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGIRYHDREVWKPEVCQICVCD
NGNVLCDDVICEDTKNCPGAVAPPGECCPVCPDGXXSPTDLETAGVEGPKGDTGPRGPRG
PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQLSYGYDEKSAGVSVPGPMGPSG
PRGLPGPPGSPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERG
PPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRG
LPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSEG
PQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSG
APGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPAGLPGPPG
ERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPG
SPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPG
AVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPG
DLGAPGPSGARGERGFPGERGVQGPPGPAGPRGSNGAPGNDGAKGDAGAPGAPGSQGAPG
LQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGETG
PSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAG
PAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEG
GKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGSDGPAGSPGTPGPQGITGQRGVVGLPG
QRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPG
RDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPAGARG
PAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPG
SPGAAGKDGLNGLAGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPP
QEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMC
HSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPSVAQKNWYVSKNPKEKKHVW
FGESMTGGSQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLK
KSLLLQGSNEIELRSEGNSRFTYTVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPL
DIGAPDQEFGIDIGPVCFL
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc
atcaggtaccacgaccgagaagtatggaaacccgaggtctgtcagatctgcgtctgcgac
aatggcaacgtgttgtgtgatgacgtgatctgcgaggacaccaagaactgccccggcgcc
gtagcgcccccgggcgagtgctgccctgtctgccccgacggnnnnntgtcgccaacggat
ctagaaaccgcaggagtcgagggacccaaaggagacaccggcccccgaggcccgagggga
cccgcaggcccccccggccgcgacggcatccctgggcagcctggactccccggccccccc
gggcctcccggacctcccggaccccctggcctcggaggaaactttgctccccaattgtct
tatggctatgacgagaagtcagctggagtttccgtgcctggccccatgggtccttctggt
cctcgtggtctccctggcccccctggctcacccggtccccaaggtttccaaggcccccct
ggtgagcctggcgagcctggagcttcgggtcccatgggtccccgtggtccccctggcccc
cctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcctggtgagcgtggg
cctcctggacctcagggtgcgcggggattgcccggaactgctggtctccctggaatgaag
ggacacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggtccc
aagggtgaacctggtagccctggtgaaaatggagctcctggtcagatgggccctcgtggt
ctgcctggtgagagaggtcgccccggagcccctggccctgctggtgctcgtggaaatgat
ggtgctactggtgctgctggaccccctggtcccactggtcccgctggtcctcctggcttc
cctggtgctgttggtgctaagggagaagctggtccccaaggagcccgaggctctgaaggt
ccccagggtgtgcgtggtgagcccggcccccctggtcccgctggtgctgctggccctgct
ggaaaccctggtgctgatggacagcctggtgctaaaggtgccaacggcgctcctggtatt
gctggtgctcctggcttccctggtgcccgaggcccctctggaccccagggccccagtggt
gcccctggtcccaagggtaacagcggtgaacctggtgctcctggcaacaaaggagacact
ggcgccaagggagagcctggccccactggtattcaaggaccccctggccctgctggggag
gaaggaaagcgaggagcccgaggtgaacccggacctgctggtcttcccggaccccctggc
gagcgtggtggacctggtagccgtggtttccctggcgcagatggtgttgctggtcccaag
ggtcccgctggtgaacgtggttcccctggccctgctggccccaaaggctctcctggtgaa
gctggtcgccccggtgaagctggtctgcctggtgccaagggtctgactggcagccctggc
agccctggtcctgatggcaaaactggcccccctggtcccgctggtcaagatggtcgcccc
ggacctccaggcccccctggtgcccgtggtcaggctggtgtgatgggattccctggacct
aaaggtgctgctggagaacctgggaaagccggagagcgaggtgttcctggaccccccggc
gctgtgggtcctgctggcaaagatggagaagctggagctcagggaccccctggccctgct
ggccctgctggtgagagaggtgaacaaggccctgctggctcccccggattccagggtctc
cccggccccgctggtcctccaggtgaagcaggcaaacctggtgaacagggtgttcctgga
gaccttggtgcccccggcccctctggagcaagaggtgaaagaggtttccctggcgagcgt
ggtgtgcaaggtccccccggtcctgctggtccccgcgggtccaacggtgcccctggcaac
gatggtgctaagggtgatgctggtgcccctggagctcctgggagccagggtgcccctggc
cttcagggaatgcctggtgaacgcggtgcagccggcctcccaggccctaagggtgacaga
ggtgatgctggtcccaaaggtgctgatggtgctcctggcaaagatggtgtccgaggtctg
actggccccatcggtcctcctggccctgctggcgcccctggtgacaagggtgaaactggt
cctagcggccctgctggtcccactggagctcgtggcgcccccggagaccgtggtgagcct
ggtccccccggccctgctggcttcgctggcccccctggtgctgatggccaacctggtgct
aaaggcgaacccggagatgctggtgctaaaggcgatgctggtccccctggccctgctggc
cccgctggcccccctggccccattggtaatgttggtgctcctggacccaaaggtgctcgt
ggcagcgctggtccccctggtgctactggtttccctggtgctgctggccgagttggtccc
cccggcccctctggaaacgctggaccccctggccctcctggccctgctggcaaagaaggc
ggcaaaggcccccgtggtgagactggccccgctggacgtcctggtgaagttggtccccct
ggtcctcctggccctgctggcgagaaaggatcccctggttctgatggacctgctggctct
cccggcactcctggacctcagggtattactggacaacgtggtgtggtcggcctgcccggt
cagcgaggagaaagaggcttccctggtcttcctggcccctctggtgaacctggcaaacaa
ggtccttctggagcaagtggtgaacgtggcccccctggtcccatgggcccccctggattg
gctggaccccctggcgagtctggacgtgagggatctcctggtgctgaaggctcccctgga
cgagatggttctcctggccccaagggtgaccgtggtgagacaggccctgctggaccccct
ggtgctcctggtgctcctggtgcccctggcccagttggccctgctggcaagagtggtgac
cgtggtgagactggtcccgcaggtcctgctggtcccatcggccccgctggtgcccgtggc
cctgctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacagggcgacaga
ggcataaagggtcaccgtggtttctccggtctccagggtccccctggccctcctggctct
cctggggaacaaggtccttctggagcttccggtcctgctggtccccgtggtccccccggc
tctcccggcgctgctggcaaagacggactcaacggtctcgcaggtcccatcggcccccct
ggccctcgtggtcgcactggtgatgctggtcctgttggtccccccggccctcccggccct
cctggtccccccggtcctcccagcggcggtttcgacttcagcttcctgccccagccacct
caagagaaggctcacgacggcggccgctactaccgggccgatgacgccaacgtggtccgt
gaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaacatc
cggagccctgaaggcagccgcaagaacccggcccgcacctgccgcgacctcaagatgtgc
cactctgactggaagagcggagaatactggatcgaccccaaccaaggctgcaacctggac
gccatcaaggtcttctgcaacatggagactggtgagacgtgcgtgtaccccactcagccc
agcgtggcccagaagaactggtacgtcagcaagaaccccaaggagaagaagcacgtctgg
ttcggcgagagcatgaccggcgggtcccagttcgagtatggtggccagggctccgaccct
gccgatgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaac
atcacctaccactgcaagaacagcgtggcctacatggaccagcagacaggcaacctcaag
aagtccctgctcctccagggctccaacgagatcgagctccggtccgagggcaacagccgc
ttcacctacactgtcacctacgacggctgcacgagtcacactggagcctggggcaagaca
gtgatcgagtacaaaaccaccaagacctcccgtctgcccatcatcgatgtggcccccttg
gacattggcgccccagaccaggaattcggcatcgacattggccctgtctgcttcctgtaa
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integrated database retrieval system
