Moraxella nasicaprae: LU297_04590
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Entry
LU297_04590 CDS
T09131
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mnc
Moraxella nasicaprae
Pathway
mnc03030
DNA replication
mnc03410
Base excision repair
mnc03420
Nucleotide excision repair
mnc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LU297_04590 (ligA)
03410 Base excision repair
LU297_04590 (ligA)
03420 Nucleotide excision repair
LU297_04590 (ligA)
03430 Mismatch repair
LU297_04590 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnc03032
]
LU297_04590 (ligA)
03400 DNA repair and recombination proteins [BR:
mnc03400
]
LU297_04590 (ligA)
Enzymes [BR:
mnc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
LU297_04590 (ligA)
DNA replication proteins [BR:
mnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LU297_04590 (ligA)
DNA repair and recombination proteins [BR:
mnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
LU297_04590 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LU297_04590 (ligA)
MMR (mismatch excision repair)
DNA ligase
LU297_04590 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LU297_04590 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
PTCB-BRCT
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
UXZ05716
LinkDB
All DBs
Position
complement(972089..974122)
Genome browser
AA seq
677 aa
AA seq
DB search
MTDLFATIDDDIITQMRALIEVLKKHNHAYYVLDNPTITDGEYDALRQQLVQLESQYPSL
VQADSPVQTVGGEPLPFFTQVMHDIPMLSLGNVFDGEDLANFLRRANERLEQVVPEYEME
LKLDGLAVSLKYQYGVFVQAITRGDGQTGEDITHNVRTIRNLPQVLPACQDIELLEVRGE
VLMPKAGFEKLNRDSQAKGEKGFANPRNAAAGSLRQLNPAIAAARPLAFFGYSVNQGLPD
DIETQSKAMAWLGQLGFETSPFAVARNQQQIQAYYDKVVQTREQLPFEIDGLVVKVNDLS
LQQRLGFLSREPRWATAYKFAAQTVPTRLLDVEWQVGRTGTLTPVGKLEPVNVGGVTVSN
VTLHNFGEIGRLGVMIGDMVSVHRAGDVIPKVSSVLPELRPADAKPIILPSHCPVCQSPV
SLPEGEALARCTGGLICAAQQKEALIHFVSRRAMDIDGLGGQWLVKFFEMGLIQTVADIY
ELHTQADHLMTLEGLGEKSVAKMLAAIEQSKQTTLPRFIFALGIRGVGESTALNLAQTFG
EFEQIRQADLPSLLAVADVGEITAQMIHDFFRAEHNMVVVNKLLAAGISWQTMSVPQDLP
LSGQTWVVTGTLASMGRDEAKEKLLALGAKVAGSVSAKTTKVLAGEKAGSKLDKAVSLGV
DIIDETAFLAMLEQSTL
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttatttgcaacgattgatgatgacatcatcacacagatgcgtgccttgatt
gaggtgctaaaaaaacacaatcatgcttattatgtgctggataatccaaccatcactgat
ggcgagtatgatgcattgagacaacaattagtgcaattagagagccaatatccaagtttg
gtacaagctgacagccctgtgcagactgtgggtggagagcctttgccgttttttacgcag
gtgatgcatgacataccgatgttgtctttgggcaatgtatttgatggcgaggatttggca
aattttttgcgtcgtgccaatgagcgacttgaacaggtggtgccagagtatgaaatggag
ctaaaactcgatggtctggcggtgtctttaaaatatcaatatggtgtttttgtgcaggca
atcactcgtggcgatggacaaacaggcgaggacatcacacataatgttcgcaccattcgc
aatctacctcaggtgttgccagcctgccaagacattgagttgttagaggttcgtggcgag
gtattgatgccaaaggcgggctttgaaaagctcaatcgtgatagccaagctaagggcgaa
aaaggttttgctaaccctagaaatgccgctgctggcagtttaagacagctaaatcctgcc
atcgctgctgccagaccattggcgttttttggttattcggtcaatcaaggcttgcctgat
gatattgagacacagtcaaaggcgatggcgtggcttggtcagcttggttttgagacttcg
ccattcgctgttgctcgtaatcagcagcaaattcaggcatattatgacaaagtggtgcag
actcgtgaacagttgccatttgagattgatggcttggtggtcaaggtgaacgatttgtct
ttgcagcagcgacttggttttttgagccgtgagccacgctgggcaacggcgtacaaattt
gctgcccaaactgtaccaaccagactgcttgatgtcgaatggcaagtgggtagaacagga
acgctgacacctgtgggcaagctagaacctgtcaatgtggggggtgtgacggtcagtaat
gtgactttgcataattttggcgagattggtcgcttgggcgtgatgattggcgatatggtc
agcgtgcatcgtgctggcgatgtgattccaaaggtctcatcggtgttgccagagctgcgt
ccagccgatgccaagcccatcattttgcccagtcattgtcctgtgtgtcagtcgcctgtg
tcgttgcccgaaggtgaggcattggctcgttgtacaggcggtctgatttgtgctgctcaa
caaaaagaggcactcattcactttgtatcacgccgagcgatggacattgatggtttgggt
ggacaatggctggtgaagttttttgagatgggattgattcagacagttgccgatatttat
gagcttcacactcaggctgaccatttgatgactttggagggcttgggcgaaaaatcagtt
gccaaaatgcttgccgccatcgaacaatccaaacaaaccactttgccgcgctttattttt
gcattaggcattcgtggcgtgggcgaaagcacggctttaaatttggcacaaacttttggc
gaatttgagcagattcgacaagctgatttgcccagcttattggcggtggctgatgttggt
gagattaccgcacagatgattcatgacttttttagagcagagcacaacatggtggtggtg
aacaaacttcttgctgctggcatcagttggcagacgatgagtgtgcctcaggatttgccg
ctatcaggtcaaacttgggttgtgacaggcactttggcaagcatgggacgagatgaggct
aaggaaaaattgcttgccttgggggcaaaagttgctggtagtgtgtcagccaagaccacc
aaagtattggcaggcgagaaggcaggcagtaagctggacaaggcggtaagtcttggtgtt
gacatcattgatgaaaccgcctttttggcgatgcttgaacaatcaaccttatga
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integrated database retrieval system
