Monoraphidium neglectum: MNEG_0064
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Entry
MNEG_0064 CDS
T05028
Name
(RefSeq) DNA excision repair protein ERCC-2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mng
Monoraphidium neglectum
Pathway
mng03022
Basal transcription factors
mng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MNEG_0064
09124 Replication and repair
03420 Nucleotide excision repair
MNEG_0064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mng03021
]
MNEG_0064
03400 DNA repair and recombination proteins [BR:
mng03400
]
MNEG_0064
Enzymes [BR:
mng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
MNEG_0064
Transcription machinery [BR:
mng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MNEG_0064
DNA repair and recombination proteins [BR:
mng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MNEG_0064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
NAD_binding_10
SNAPC1
ResIII
AAA_11
DEAD
TFIIA
NST1
Motif
Other DBs
NCBI-GeneID:
25726182
NCBI-ProteinID:
XP_013906897
UniProt:
A0A0D2KCR7
LinkDB
All DBs
Position
Unknown
AA seq
1459 aa
AA seq
DB search
MLGEPPDIADAHPSPDGGVAAGHEGAAGLPGCSVHCAVVPEARHEGLQDHELALYLALDE
LDTWDQRLSGDEGAAPLEVEVDEQQQQQQQQQEQQQEQQQEQQQEQQQEQQQKQQQEQQQ
QQQQQQQQQQQHVLVSPAEQEEGQLAVPQEQHHEFLPADEGGATIQQNGGVIEAVEPSEQ
RQEVQEGWLVVAGAAGDDEQRALDKGTFNAAADAARLYEDAVTTAGVLYCLHCLYHTQHC
APPAAAYVPLPLLRLLSARASGLVAAGAADAALVLRTLLRGAALVAGAARRSLPRLALRR
AEVSRMSGRHGGDGDGGVPMWAVSQEVQREALFHIKAALKGLANFRRLQALCDDYSEARA
VVFGPLGACAAMKFQLDGLTVYFPYEFIYPEQYNYMAELKAALDARGHVLLEMPTGTGKT
ITLLSLITSYQLAHPEVGKLVYCTRTVPEMEKVLAELRELVAYRNKYLEPSPPSILALGL
SSRKNLCIHPVVAEEGSRESVDAGCRRLTAAWARERAARDSSIELCDFFEQHQAAGQDAL
LPPGVYTLHDLRAFGRKKGWCPYFLARHMMAFSNVIVYNYQYMLDPKVSQMVSRELEKEC
IVVFDEAHNIDNVCIEALSVNLRQQTLRAARGNITKLETAVRDAQRANKAKLDAEYQRLV
QGLVTSGQLRGGEEWLANPALPEDVVRDSMPGNIRRAEHFLGFMRRFVAHLADVMRTPHV
TSEGPASFLAKVQEAVRVDAKTLRFCYDRLSSLLKTLEVTDTDELTPLQLVADFGTLLGT
YQQGFSIIMEPYDERLPHIPDPVLQLSCLDASLAMRPVFSKFQSVVITSGTLSPMNLYPK
ILGVTPVSTVALNMTLARDCVCPVVVTRGADQTPISTRYESRLDPANVRNYGRLVVDLAG
SVPDGLVVFFVSYSYMDYVISKWHDMGILREVMAHKLIFIETQDVMETTLALDNFRRACD
SGRGAVFFSVARGKVAEGIDFDRHYGRAVVMIGVPYQYTLSRVLRARLEYLRATFNIQES
DYLSFDALRQAAQCMGRVIRSKADYGLMVLADKRYQRADKRDKLPPWITQHLKARPGTTA
RLATVPPPTKPRLLVDAHLNLSTDMLLVVTRDFMRAMAQPYDRGQIGKSLFSHEQVEALE
EVRQGRKRAAQAAAERERAAAAAAAGLGKAAAGAGGVEAMQRRATIVSAGEEKRGVRGLE
DFVLGGPKLRKWYGQEDEVRIRDGGAAEGPAESDGAGEDGGPKDVVLVTDGESSMGEQVV
LQLILARAKVRMLANDVAAAKAGYGPYVEPISADISGGGGLARALRNVRCVIALGRLGKL
LPAAQQAGVEHIVLLSTAGMPQPGGLAALFGGGGDAGLREEARELQLAASGLPHVVVKTG
AIRDVPGGSSALAFSGDVRSGGGGAAQGISREDLACVLARVALDVQLPAEGASTVVVAAA
GPGRPPEDWAAALQPLVAA
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtgaaccccccgatattgcagacgcacatccctccccggacggcggcgtggct
gccggacatgagggcgcggcagggctgccagggtgctctgtgcactgcgcggtggtgccg
gaggcacggcatgaggggctgcaggatcacgagttggctctgtacctggcgttggatgaa
ttggatacgtgggaccagcggctcagcggagacgagggggcggcaccgctggaggtggaa
gttgacgagcagcagcagcagcagcagcagcagcaggaacagcagcaggaacagcagcag
gaacagcagcaggaacagcagcaggaacagcagcagaaacagcagcaggaacagcagcag
cagcagcagcagcagcagcagcagcagcagcagcacgtgctggtgtcaccggcagagcag
gaggaaggacagcttgcagtgccacaggagcagcatcacgagttcctgccagcagacgag
gggggtgccactatccagcaaaacggcggcgtgatcgaggcggttgagccctcggagcag
cggcaagaggtgcaggaggggtggcttgtcgtggcgggtgcagcaggggacgacgagcag
cgcgccctcgacaagggcacgttcaacgccgccgctgatgcggccaggctgtatgaggac
gccgtcaccacggccggtgtcctgtactgcttgcattgcctctaccacacgcagcactgc
gcaccccctgctgccgcatacgtgccgctgcccctgcttcgccttctgtccgcgcgcgcc
agcggcttggtggccgcgggcgctgctgacgctgccctcgtgctccgcacgctgctgcgc
ggcgcggcgctcgtcgccggcgcggcgcggcgctcgctgccgcggctggcgctgcggcgg
gcagaagtgtcccgcatgtcagggcgccacggcggcgatggggatggcggcgtgccgatg
tgggcggtgtcacaggaggtgcagcgcgaggccctgttccacatcaaggccgctctcaag
ggcctggccaacttccgaaggctgcaggcgctctgcgacgattactcggaggcgagggca
gtggtgtttgggcccctgggtgcgtgtgcagccatgaagtttcaactggacggcttgacg
gtgtacttcccctatgagttcatatatcctgagcaatacaactatatggcggagctgaag
gcggcgcttgacgcccggggccatgtgctgctggagatgcccacgggtactggcaagacc
atcaccctgctgtccctcatcaccagctaccagctggcccacccagaggtgggcaagctg
gtgtactgcacccgcacagtgcctgagatggagaaggtgctggctgagctgagggagctc
gtggcctacaggaacaagtacctcgagcccagcccgccctctatcctggcgctgggcctc
agctcgcgcaagaacctctgcatacaccccgttgtggcagaggagggctcgcgcgagagc
gtcgacgccggctgccggcggctgaccgcagcctgggcgcgggagcgggctgcgcgcgac
tccagcatcgagctatgcgactttttcgagcagcaccaggccgctgggcaggatgcgctg
ctgccaccaggcgtgtacacgctgcacgacctgcgggctttcggccgcaagaaggggtgg
tgcccctacttcctggcgcgccacatgatggcgttcagcaacgtcatcgtctacaactac
cagtacatgctggaccccaaggtctcacagatggtgtcgcgcgagctcgagaaggagtgc
atcgtggtgtttgacgaggcccacaacatcgacaacgtctgcatcgaggcgctgtcagtg
aacctgaggcagcagacgctcagggcggcgcgcggcaacatcacgaagctggagaccgct
gtgcgtgacgcccagcgtgccaacaaggccaagctcgacgccgaataccagaggctggtg
cagggccttgtcacgtcggggcagctgcgtggcggcgaggagtggctggccaacccggcg
ctgccggaggacgtcgtgcgcgacagcatgccgggcaacatccggcgcgccgagcacttc
ctgggcttcatgcggcggttcgtggcgcacctggctgacgtcatgcggacgccccacgtg
acgagtgaggggcccgcgtcctttctggccaaggtgcaggaggccgtgagggtggacgcc
aagactctcaggttttgctacgaccgcctgagcagcctgctgaagacgctagaggtcaca
gacaccgacgagctgacacccctgcagctggtggcagatttcgggacgctgctgggcacg
taccaacaggggttctccatcatcatggagccctatgatgagcgcctgccacacataccc
gaccccgtgctgcagctcagctgcctggatgcgtccctggccatgcgaccggtgttctcc
aaatttcagagcgtggtcatcaccagcggcacactcagccccatgaacctttaccccaag
attctgggggtcaccccggtgtcgactgtggccctcaacatgacgctggcacgcgactgc
gtctgccctgtcgtcgtcacgcgcggcgctgaccagacccccatatcaacgcgttacgag
tcgcgcctggaccccgccaacgtccgcaactacggccgcctggtggtggacctggccggc
tccgtgcctgacgggctagtggtcttctttgtatcgtactcctacatggattacgtcatc
agcaagtggcacgacatgggaatcctgcgtgaggtcatggcccacaaactgatcttcatt
gagacacaggatgtgatggagacgaccctggccctggacaacttccgcagggcctgcgac
agcggcaggggcgcggtcttcttcagcgtcgcgcgcggcaaggtggcggagggcatcgac
tttgaccggcactacggccgcgccgtcgtcatgatcggcgtgccctaccagtacacgctc
tccagggtgctgcgtgcgcggctggagtacctgcgggcgaccttcaacatccaggagtct
gattacctgtcgttcgacgccctgaggcaggcggcgcagtgcatgggccgcgtcatccgc
agcaaggcggactacggtctgatggtgctggctgacaagcgctaccagcgcgccgacaag
cgcgacaagctgccgccctggatcacgcagcacctgaaggcgaggcccggcacaactgca
cggcttgccaccgtccctcctcccaccaaaccccgcctgcttgtggacgcgcacctcaac
ctgagcacggacatgctgctggtggtcacgcgcgacttcatgcgcgccatggcgcagccc
tacgaccgcggccagatcggcaagagcctcttcagccacgagcaggtggaggcgctggag
gaggtgcggcaggggaggaagcgcgcggcgcaggcggctgcggagcgggagcgggcggcg
gcagcggcggcggcggggttgggcaaggcggcagcgggtgcaggtggggtcgaggcgatg
cagcgccgcgcgaccattgtttcggcgggcgaggagaagcgcggcgtccgaggcctggag
gatttcgtgctcggcggtcccaagctgcggaaatggtacgggcaggaggacgaggtcagg
atccgtgacggcggcgcagcagaggggcccgcagagagcgacggcgcgggcgaggacggc
ggcccgaaggacgtagtgcttgtgactgatggcgagtcgagcatgggggagcaggtggtg
ctgcagctgatcctggccagggccaaggtgcgcatgctggccaacgatgtggcggcggcc
aaggccggctacgggccctacgtggagcccatctctgctgacatcagcggcggcggcggc
ctggcccgcgctctgcgcaacgtgcgctgcgtgatcgcgcttgggcggctggggaagctg
ctgccagcggcgcagcaggcgggggttgagcacattgtgcttctgtccacggcgggcatg
ccgcagcctggcggcctggcggcgctgttcggcggcggcggcgacgcaggactgcgggag
gaggcgcgagagctgcagctggccgccagcggcctgccacacgtggtcgtcaagacgggc
gccatccgcgacgtccccggcggcagcagcgccctggcgttttcaggcgacgtgaggagc
gggggcggcggggccgcccagggcatcagccgggaggacctcgcgtgtgtcctggcgcgg
gtggcgctggacgtgcagctgccggcagagggggcgtcgacggtggtggtcgcggcggcg
gggccggggcggccgccggaggactgggcggcggcgctgcagccgcttgtcgcggcataa
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integrated database retrieval system
