Macaca nemestrina (pig-tailed macaque): 105470497
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Entry
105470497 CDS
T08765
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
mni
Macaca nemestrina (pig-tailed macaque)
Pathway
mni04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mni00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105470497 (COL20A1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
VWA_3
DUF4959
Motif
Other DBs
NCBI-GeneID:
105470497
NCBI-ProteinID:
XP_011720863
Ensembl:
ENSMNEG00000039409
LinkDB
All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
MGRTGGSVCSRQTLSLALGTRLCGFVLCYINAWLRVTPRTPFGAVSRKQEAGVKMGLPSL
LPASHWRLPLVFWAHSPLASPSEAPAFSRSTTSSVHIPGRPRHKHHVLRRPLQSGRYRLG
RLGPPPGPDRPGEGASTGRCRCRGAASGHLRLTVLPEDRLQMKWRESEGSGLGYLVQVQP
MAGDSEQEVILTTKTPKATVGGLSPSKGYTLQIFELTGSGRFLLARREFVIEDLKSSSLD
RNNQRPLSNGAPEPTPSLMGSPDPEQASEPRVAFVPSRDPPIPASPQFRCLPPVPADMVF
LVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGDAQTEWNLNSFGTKEQV
LAAVHRLRYKGGNTFTGLALTHVLGQNLQPAAGLRPEAAKVVILVTDGKSQDDVHTAAHV
LKDLGVNIFAVGVKNADEAELRLLASPPRDITVHNVLDFPQLGALAGLLSRLICQRLQDG
GPRRGPAAAPALDTLPAPTGLVLSQVTSSSIHVSWTPAPRLPLKYLIVWRASRGGTPREV
VVEGPAASAELHNLTSRTEYLVSVFPIYEGGVGEGLRGLVTTAPLSPPRALTLATVTPRT
IHLTWQPSAGATHYLVRCSPASSKGEEEEQEVQVRRPEVLLDGLEPGRDYEISVQSLRGP
ESSEARGIRARTPVLPPPRHLGFSDVSHDTVRVIWEGAPRHVRLVRVTYVSSEGGHSGQT
EIPGNATSAVLGPLSSSTTYTVRITCLYPGGGSSTLTGQVTTKKVPSPSQLSVTELPGDT
VQLAWVAAAPSGVLVYQIKWTPLGEGKAHEISVPGNLGTAVLPGLGRHTEYDVTILAYYR
DGARSDPVSLRYTPSTVNRSPPSNLALASETPDSLQVSWTPPRGRVFHYRLTYTPASGSG
PEKSVSVPGPRSHVTLPDLQAATKYRVLVSAVYAAGRSEAVSATGQTAACPALRPDSSLP
GFDLMVAFGLVEKAYASIRGVAMEPSAFGGTPTFTLFKDAQLTRRVSDVHPAPLPPEHTI
VFLVRVLPETPREAFALWQMTAEDFQPVLGVLLDAGRKSLTYFHRDPRAALQEATFDPQE
VRKIFFGSFHKVHVAVGRSKVRLYVDCRKVAERPLGEVGSAPSAGFITLGRLAKARGPRS
SSAVFQLQTLQIVCSDTWADEDRCCELPALRDGETCPAFVSACSCSSETPGPPGPQGPPG
LPGRNGTPGEQGFPGPRGEPGPPGQMGPEGPGGQQGSPGTQGRAVPGPVGPPGVKGEKGD
HGLPGLQGHPGHQGIPGRVGLQGPKGMRGLEGTAGLPGPPGPRGFQGMAGARGTGGERGP
PGAVGPTGLPGPKGERGEKGEPQSLATLYQLVSQACESAIQTHVSKFDSFHENTRPPMPI
LEQKLEPGTEPLGSPGTRSKALLPGEWRHGSRHLEGRGEPGAVGQTGSPGQQGG
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atgggacggacgggagggagcgtgtgctcccgccaaaccctcagcctcgccttgggaacg
cgcctgtgtggtttcgttctctgttacatcaatgcttggctgagagttactccacgaaca
ccttttggagcagtctccaggaagcaggaggctggggtgaagatggggctgccttccctc
ctgcctgcttcccactggcgcctcccactggttttttgggcacatagccctctggcttct
cccagtgaggcacccgcattttcacgcagcaccacctcctccgtgcacatccccgggcga
ccgcgccacaagcaccacgtcctcagaaggcccctccagtctggccgctaccggttgggg
cgtttgggaccaccaccagggcctgacaggccgggcgagggagcctccacgggtcgctgc
cgttgcagaggggcagcaagtggccacctgaggctgactgtgctgcctgaggaccggcta
cagatgaagtggagagagtcggaggggagcggcctcggctacctggtgcaggtgcagccc
atggcaggggactcggaacaggaggtgatactgaccaccaagacccctaaggccacagtg
gggggcctgagcccctccaagggctacaccttgcagatcttcgagctcactggctctggg
cgcttcctgctggctcggagggagtttgtgattgaggatctgaagagtagctccttggac
aggaacaaccagagacctctcagcaatggagccccggagcccaccccctccctcatgggg
agcccagaccctgagcaggcttccgagccccgagttgcctttgtgccaagccgggatccg
cccattcctgccagcccccagttccgctgcctaccccctgtgcctgctgacatggtcttc
ctggtggacgggtcctggagcatcggccacagtcactttcaacaggtcaaggacttcctg
gccagcgtcattgcaccctttgaaatcgggccggataaggtccaagtaggcctgactcag
tacagcggcgatgcccagactgagtggaacctgaactccttcggcaccaaggagcaggtg
ctggcagctgtgcaccgcctccgctacaagggggggaacacattcacaggcctcgccctg
acccatgtgctggggcagaacctgcagccggcggccggcctccgtccagaggcggccaag
gtggtgattctggtgacggacggcaagtcccaggacgatgtgcacactgctgctcatgtc
ctcaaggacctgggcgtgaacatcttcgctgtgggtgtgaagaacgccgatgaggctgag
ctgaggctcctggcgtccccgccgcgggacatcaccgtccacaacgtgctggacttcccg
cagcttggcgcactggctggcctgctcagccgcctcatctgccagaggctgcaggatggg
ggcccacggcggggcccagcagcggctccagccctggacaccctccccgcccccaccggc
ctggtcctgagccaggtgacctcctccagcatccacgtgtcctggactccagccccccgg
ctccccctcaagtatctgattgtttggcgagcctccagaggtggcacccccagggaggtg
gtggtggaggggcctgccgcctccgcagagctgcacaacctgacctcccgcacggagtac
ctggtctccgtgttccccatctacgagggcggggttggcgagggcctgcggggcctggtg
accacagcacctctgtctccgccccgggcgctgaccctggccacagtgactcccagaacc
atccacctcacctggcagccctcggccggggccacccactacctggtgcgatgctcacct
gcttcctccaagggtgaggaggaggagcaagaggtgcaggtgaggcggcccgaggtgctg
ctggatggcctggaaccaggcagggactatgagatctcggtgcagagcctgcgaggccct
gagagcagcgaggcccggggcatccgtgccaggacccccgtcctgccccccccgagacac
ctgggcttctcagacgtgagccacgacacagtgcgagtgatctgggagggcgccccaagg
catgtgcgcctggtcagggtcacctatgtctccagcgagggtggacactcggggcagaca
gagattcctgggaatgccacctcggccgtgctggggcccctctcttcctccaccacctac
actgtccgcatcacctgcctctaccctgggggtggctcctctacgctgactggccaggtc
accaccaagaaagttcccagcccaagccagctgtccgtgacggagctgccaggggacaca
gtccagctggcatgggtggccgcagccccatctggggtgcttgtctaccagatcaagtgg
acgcccctgggagaggggaaggctcacgagatctctgtcccagggaacctcggcacggcc
gtcctgcctggcctagggaggcacacggagtatgacgtcaccatcctggcctactacagg
gatggcgcccgcagtgaccctgtgtccctccgctataccccgtccacagtgaacaggagc
cccccctccaacctggccctggcctcggagacccccgacagcctgcaggtcagctggaca
cccccacgtggccgcgtgttccactaccggctcacctacacgcccgcctctggctcagga
cccgagaaatccgtctccgtgccaggacccaggagccacgtgacactccccgacctgcag
gcagccaccaagtacagggtcctggtctcagctgtctacgcagcaggcaggagtgaggct
gtgtctgccaccggccagacagcagcctgcccagccctccgcccggacagctccctccca
gggtttgacctgatggtggccttcggcctggtggaaaaggcttacgcttccatccggggc
gtggccatggagccctctgccttcggtgggaccccaaccttcacgcttttcaaggacgcc
cagctgacaagacgggtcagtgacgtccacccagccccgctccctccagagcacaccatc
gtcttccttgtgcgcgtgcttcccgagacgccccgtgaggcctttgcgctgtggcagatg
acggccgaggacttccagcccgtcctcggggttctgctggacgccgggaggaagtccctg
acctacttccaccgcgaccccagggctgccttgcaggaggccaccttcgacccgcaggaa
gtgaggaagattttcttcgggagcttccacaaggtgcacgtggctgtgggccgctccaag
gtcaggctctatgtggactgccgaaaggtggctgagcggcccctcggggaggtgggcagc
gcaccctctgccggcttcatcacactggggaggctggccaaggccaggggcccccggagc
agctcagccgtgtttcagctccagacactgcagatcgtgtgcagtgacacctgggccgac
gaggaccggtgctgtgagctccctgccttgagggatggagagacctgcccggccttcgtg
tctgcctgctcctgttcctcagagacccctgggcccccagggccccagggacccccaggc
ctccctgggaggaacggcactccgggagagcagggcttccccgggcccaggggagagccc
gggccacccggacagatgggaccagaaggtcctggaggccagcaggggtcaccggggacc
caaggccgcgcagtcccagggcctgtgggtccaccaggggtcaaaggagagaaaggagac
catgggctcccaggcttgcagggccaccccggccaccagggcatccccgggagagttggc
ctccagggaccaaagggaatgagaggcctggagggaactgctggcctgcccggaccccct
ggccccagggggttccagggcatggcaggggccaggggcactggtggagagcgaggaccc
ccaggggctgtggggcccacagggctgccggggcccaaaggggaacgaggagagaagggc
gagccgcagtccctcgccaccctctaccagcttgtgagccaggcctgtgagtccgccatc
cagacacacgtgtcaaagtttgactccttccacgagaacaccaggcccccaatgcccatc
ttggagcagaagctggagccgggcactgagcccctggggtcccctggcacccgcagcaag
gccctgcttcctggagaatggaggcatggtagccgccacctagagggcagaggggagcct
ggagctgttggtcagacgggcagccctgggcagcaggggggctag
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