Macaca nemestrina (pig-tailed macaque): 105472370
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Entry
105472370 CDS
T08765
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
mni
Macaca nemestrina (pig-tailed macaque)
Pathway
mni04151
PI3K-Akt signaling pathway
mni04510
Focal adhesion
mni04512
ECM-receptor interaction
mni04611
Platelet activation
mni04820
Cytoskeleton in muscle cells
mni04926
Relaxin signaling pathway
mni04933
AGE-RAGE signaling pathway in diabetic complications
mni04974
Protein digestion and absorption
mni05146
Amoebiasis
mni05165
Human papillomavirus infection
mni05205
Proteoglycans in cancer
mni05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mni00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
105472370 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105472370 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105472370 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
105472370 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
105472370 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
105472370 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
105472370 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
105472370 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
105472370 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
105472370 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
105472370 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
105472370 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mni00536
]
105472370 (COL1A1)
Glycosaminoglycan binding proteins [BR:
mni00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
105472370 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
105472370
NCBI-ProteinID:
XP_011723843
Ensembl:
ENSMNEG00000038612
LinkDB
All DBs
Position
Unknown
AA seq
1498 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQVEGQDEDIPPITCVQNGLRYHDRDVWKPEPCRI
CVCDNGKVLCDDVICDETKNCPGAEVPEGECCPVCPDGSESPTDQETTGVEVISCPRLLS
LRRPCLLTVLPSLTWPLVSSSPIPQGPKGDTGPRGPRGPAGPPGRDGIPGQPGLPGPPGP
PGPPGPPGLGGNFAPQLSYGYDEKSTGGISVPGPMGPSGPRGLPGPPGAPGPQGFQGPPG
EPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKG
HRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGAPGPAGARGNDG
ATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGPRGSEGPQGVRGEPGPPGPAGAAGPAG
NPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPGGPPGPKGNSGEPGAPGSKGDTG
AKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKG
PAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPG
PPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGAPGPAG
PAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERG
VQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRG
DAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGETGPSGPAGPTGARGAPGDRGEPG
PPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPAGPPGPIGNVGAPGPKGARG
SAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPRGETGPAGRPGEVGPPG
PPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQG
PSGASGERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGPKGDRGETGPAGPPG
APGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPRGDKGETGEQGDRG
IKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGTPGKDGLNGLPGPIGPPG
PRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAHDGGRYYRADDANVVRD
RDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCNLDA
IKVFCNMETGETCVYPTQPSVAQKNWYISKNPKDKRHVWFGESMTDGFQFEYGGEGSDPA
DVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLLQGSNEIEIRAEGNSRF
TYSVTVDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPLDVGAPDQEFGFDVGPVCFL
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggaaggccaagtcgagggccaagacgaagacatcccaccaatcacctgc
gtacagaacggcctcaggtaccatgaccgagacgtgtggaaacccgagccctgccggatc
tgcgtctgcgacaacggcaaggtgttgtgcgatgacgtgatctgtgacgagaccaagaac
tgccccggcgccgaagtccccgagggcgagtgctgtcccgtctgccccgacggctcagaa
tcacccaccgaccaagaaaccaccggcgtcgaggtaatctcctgccctcgacttttgtcc
ctccgccgcccgtgcctcctcacggtcctcccttctctaacctggcctcttgtttcttct
tccccaatcccacagggacccaagggagacactggcccccgaggcccaaggggacccgca
ggcccccctggccgagatggcatccctggacagcctggacttcccggaccccccggaccc
cccggacctcccggaccccctggcctcggaggaaacttcgctccccagttgtcttatggc
tatgatgagaaatcaaccggaggaatttctgtgcctggtcccatgggtccctctggtccc
cgtggtctccctggcccccctggtgcacctggtcctcaaggcttccaaggtccccctggt
gagcctggcgagcctggagcttcaggtcccatgggtccccgaggtccccctggcccccct
ggaaagaacggagatgatggggaagctggaaaacctggtcgtcctggtgagcgtgggcct
cctgggcctcagggtgctcgaggattgcccggaacagctggcctccctggaatgaaggga
cacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggtcccaag
ggtgagcctggcagccctggtgaaaatggagctcctggtcagatgggcccccgtggtctg
cctggtgagagaggtcgccctggagcccctggccctgctggtgctcgcggaaatgatggt
gctactggtgctgccggaccccctggtcctactggccccgctggtcctcctggcttccct
ggtgctgttggtgctaagggtgaagctggtccccaaggtccccgaggctctgaaggtccc
cagggtgtgcgtggtgagcctggcccccctggccctgctggtgctgctggccctgctgga
aaccctggtgctgatggacagcctggcgctaaaggtgccaatggtgctcctggtattgct
ggtgctcctggcttccctggtgcccgaggcccctctggaccccagggccccggcggccct
cccggtcccaagggtaacagcggtgaacctggtgctcctggcagcaaaggagacactggt
gctaagggagaacccggccccgttggtgttcaaggacctcctggccctgctggagaggaa
ggaaagcgaggagctcgaggtgaacccggacccactggcctgcccggaccccctggcgag
cgtggtggacctggtagccgtggtttccctggtgcagatggtgttgctggtcccaagggt
cccgctggtgaacgtggttctcctggccctgctggccccaaaggatctcctggtgaagct
ggtcgtcctggtgaagccggtctgcctggtgccaagggtctgactggaagccctggcagc
cctggtcctgatggcaaaactggcccccctggtcccgccggtcaagatggtcgccccgga
cccccaggcccccctggtgcccgtggtcaggctggtgtgatgggattccctggacctaaa
ggtgctgctggagagcccggcaaggctggagagcgaggtgttcccggaccccctggcgct
gtcggtcctgctggcaaagatggagaggctggagctcagggagcccctggccctgctggt
cccgctggcgagagaggtgaacaaggccctgctggctcccccggcttccagggtctccct
ggccccgctggtcctcctggtgaagcaggcaaacctggtgaacagggtgttcctggagac
cttggtgcccccggcccctctggagcaagaggcgagagaggattccctggcgagcgtggt
gtgcaaggtccccctggtcctgctggtccccgaggggccaatggtgctcccggcaatgat
ggtgctaagggtgatgctggtgcccctggagctcccggtagccagggcgcccctggcctt
cagggaatgcctggtgaacgtggtgcagctggtcttccagggcctaagggtgacagaggt
gatgctggtcccaaaggtgctgatggctctcctggcaaagatggcgtccgtggtctgact
ggtcccattggtcctcctggtcctgctggtgcccctggtgacaagggtgaaactggtccc
agcggccctgctggtcccactggagctcgtggtgcccctggagaccgtggtgagcctggt
ccccccggccctgctggcttcgctggcccccctggtgctgatggccaacccggtgctaaa
ggcgaacctggtgatgctggtgctaaaggcgatgctggtccccctggccctgccggaccc
gctggaccccctggccccattggtaatgttggtgctcctggacccaaaggtgctcgtggc
agcgctggtccccctggtgctactggtttccctggtgctgctggccgagtcggtcctcct
ggcccctctggaaatgctggaccccctggccctcctggtcctgctggcaaagaaggtggc
aaaggtccccgtggtgagactggccctgctggacgtcctggtgaagttggtccccctggt
ccccctggccccgctggcgagaaaggatcccctggtgctgatgggcctgctggtgctcct
ggtactcccgggcctcaaggtattgctggacagcgtggcgtggtcggcctgcctggtcag
agaggagaaagaggcttccctggtcttcctggcccctctggtgaacctggcaaacaaggt
ccctctggagcaagtggtgaacgtggtccccctggtcccatgggcccccctggattggcc
ggaccccctggtgaatctggacgtgagggagctcctggtgccgaaggttcccctggacga
gatggttctcctggccccaagggtgaccgtggtgagactggccccgctggacctcctggt
gctcctggtgctcctggtgcccctggccccgttggccctgctggcaagagtggtgatcgt
ggtgagactggtcctgccggtcccgctggtcctgtcggccctgttggcgcccgtggcccc
gctggaccccaaggcccccgtggtgacaagggtgagacaggcgaacaaggcgacagaggc
ataaagggtcaccgtggcttctctggcctccagggtccccctggccctcctggctctcct
ggcgaacaaggtccctctggagcctctggtcctgctggtccccgaggtccccctggctct
gctggtactcctggcaaagatggactcaacggcctccctggccccattgggccccctggt
cctcgcggtcgcactggtgatgctggtcctgttggtccccctggccctcctggccctccc
ggtccccctggtcctcccagcggtggtttcgacttcagcttcctgccccagccacctcaa
gagaaggctcacgatggcggccgctactaccgggctgatgatgccaatgtggttcgtgac
cgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaacatccgg
agccccgagggcagccgcaagaaccccgcccgcacctgccgcgacctcaagatgtgccac
tctgactggaagagcggagagtactggattgaccccaaccaaggctgcaacctggatgcc
atcaaagtcttctgcaacatggagactggtgagacctgcgtgtaccccactcagcccagt
gtggcccagaagaactggtatatcagtaagaaccccaaggacaagaggcacgtctggttc
ggcgagagcatgaccgacggattccagttcgagtatggcggcgagggctccgaccctgcc
gacgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccagaacatc
acctaccactgcaagaacagcgtggcctacatggaccagcagactggcaacctcaagaag
gcactgctcctccagggctccaacgagatcgagatccgcgccgagggcaacagtcgcttc
acctacagcgtcactgtcgatggctgcacgagtcacaccggagcctggggcaagacagtg
atcgaatacaaaaccaccaagacctcccgcctgcccatcatcgatgtggcccccttggac
gttggtgccccagaccaggaattcggcttcgacgttggccctgtctgcttcctgtaa
DBGET
integrated database retrieval system
