Mustela nigripes (black-footed ferret): 132013659
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Entry
132013659 CDS
T09425
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mnp01002
]
132013659 (USP40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132013659 (USP40)
Enzymes [BR:
mnp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
132013659 (USP40)
Peptidases and inhibitors [BR:
mnp01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
132013659 (USP40)
Ubiquitin system [BR:
mnp04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
132013659 (USP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
132013659
NCBI-ProteinID:
XP_059249732
LinkDB
All DBs
Position
3:complement(40396855..40473654)
Genome browser
AA seq
1285 aa
AA seq
DB search
MVVSNVGLSRLVGLGFRQNGLKRNILHFSASCPLGTVLGALCVSSPSDPPPHSRVGSSFT
MFGDLFEEDYSSVSNYQYGKEKKLKTKTLEPPAPREFTNLSGIRNQGGTCYLNSLLQTLH
FTPEFREALFSLGPEELGSFEDKDKPDAKVRIIPLQLQRLFAQLLVLDQDAASTADLTDS
FGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTVVNQVVCKECKNVSE
KQEDFLDLTVAVKNVSGLEDALWTMFVEEEVFDCDNLYHCGTCDRLVKATKSAKLRKLPP
FLTVSLLRFNFDFVKRERYKETSCYTFPLRINLKPFCEQSDSDDLEYVYDLFSVIIHKGG
CYGGHYHVYIKDVDHLGNWQFQEEESKPVLSFKDLQNEEEIDDDPLIILKAILLQEENNV
IPVDQLGQKLLKKTGMSWNKKYRRQYGPLRKFLKLHSQIFLLSSDESTVSLLKNGFLQAE
SDFQRNDQHIFKTFTSESPGLNDQTSCPHWFDINDSKVQPIKEKDIERQFQGKESAYMLF
YRKSQLQRPPEAQANPRYGVPCHLLSEMDAANIELQIKRAEWDSTNNNLELHLHLGPHYH
LFSGALHPVVSKAESVLDLTFDKRKTLGDLRQSIFQLLEFWEGDMVLSVAKFVPAGLHVY
QTLDGDDLTLWEMEIVDGEDLFVWNGVEVGGIQIPTGNDCEPLLINVLHLATSSEGDKCQ
QLVESPHVFPSNAQMGEVLTTLAGPMGVLFINATDPAEEKNWVTIPREDLKKTFRELGLG
NHSSVLVQDSRDDNSVLLKQGKWFSGMSEISWLQVQNLCGLESEEKQVKISATMNTVVFD
IRIKAIKELKLMKELAENSCLRPIDRNGKLLCPVPDSYTLKEAELKMGSSLGLCPGKAPT
SSQLFLFFTVGSDVQPGTEMEIIVEATMSVGDCLKLLLEKSGLPGDTWHLRKMDWCYEAG
EPLCEEDAALREVAIRSGDTLLLIEGKLPPPGFLRVPVWWYQPGGPTGHWKSPVRMNSTP
SPDAPGDPHGEVSLRFLGDLEISEDTTVAELKAQAMTLSPSSELVIPSPAFLRAWTMEGQ
RPSRLLRANQQQLKEYKLGRKTEICLEPLEKEENLGPHDVVLRTQMRLPGERAYTPCVDL
VWDTARGWTASSLRQQVAYFCSLPVEKIEIAKYFPEKFEWLPISSWNQQLTKRKKKKKQD
NLQGAPYYLKDGDTIGIKNLLVEDDEDFSTVRDDLGKETQKQLTLGKKSQEALRVPSSDL
FSGAKIPSRPRAPEASLSIHVGSFR
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggttgtttcgaatgtgggtctgagccggctcgtggggctgggctttaggcagaacggg
ttgaaaaggaatatattgcatttcagcgcttcctgccccttaggaactgtgctaggcgct
ttgtgtgtctcatctccaagtgaccctcctccacactcgagggtaggatctagtttcaca
atgtttggggatctgtttgaagaagattattccagtgtgtcaaattatcagtatggaaaa
gaaaagaaattaaagaccaaaaccttggagccaccagctcctagggaattcaccaattta
agcggaataagaaatcagggtggaacctgttacctcaattccctccttcagactcttcat
ttcacacctgaattcagagaagctttattttcccttggcccagaagaacttggttcattc
gaggataaggataaacctgatgcaaaggtccggatcataccgttacagttgcagcggttg
tttgcccagcttcttgtcttggaccaggacgcggcgtccacagcagacctcactgacagc
ttcgggtggaccagcaatgaggaaatgaggcaacatgatgtgcaggaactgaatcgaatt
ctctttagtgctttggaaacctctttagtcgggacctccggccatgacctcatcaatcgt
ctgtatcatggaaccgttgttaaccaggttgtttgtaaagagtgtaagaatgtcagtgaa
aagcaggaagacttcttagatctaacagtagcagtcaaaaacgtatcaggtttggaagac
gccctctggaccatgtttgtagaagaggaagtgtttgactgtgacaacttataccactgt
gggacttgtgacaggctggttaaagccacaaagtcagccaaattacgtaagctgcctccc
tttcttactgtgtcattattaagatttaattttgattttgtgaagcgtgaacgatacaag
gaaactagctgttacacgttccctctacggatcaatctcaagcctttttgtgaacagagt
gactcggatgacttggagtatgtctatgacctcttctcggttattatacataaaggtggt
tgctatggaggacattaccacgtctatattaaagatgtcgatcatctgggaaactggcaa
tttcaagaggaagagagcaaaccagttttgagtttcaaagatctccagaatgaagaagag
attgatgatgatccactgataattctgaaagcaatcttactacaggaggagaataatgta
attcctgttgatcagctgggccagaaactcttgaaaaagacaggaatgtcttggaacaag
aagtacagaagacagtatggaccactgcgaaagttcttaaagcttcattcccagatattt
ctactcagttcagatgaaagtacagtcagtctattgaagaatggttttctccaggctgag
tctgatttccaaaggaatgatcaacacattttcaagacatttacttcagaatccccagga
ttaaatgatcaaacctcctgtcctcactggtttgatataaatgattccaaagtccaacca
atcaaggaaaaagatattgaacggcagtttcagggtaaagaaagtgcctacatgttgttt
tatcggaaatcccagttgcagagacccccagaagctcaagctaatccaagatatggggtt
ccatgtcatttgctgagtgaaatggacgcagccaacattgaactgcaaataaaaagggca
gaatgggattctacaaacaataatttagagttacatctccacctgggccctcattatcat
ttattcagtggggctctgcacccagttgtctctaaagcagaaagtgtgttggatttaacc
tttgataaaagaaaaactttaggagatctgcgacagtcaatatttcagctgttagaattt
tgggaaggagatatggttcttagtgtggcaaagtttgtaccagcaggacttcacgtttac
cagacgcttgatggagatgacctgacactgtgggaaatggagattgtggacggggaagac
ctctttgtatggaatggggtggaggttggtggcatccagattccaaccgggaacgactgt
gaacctctgctcataaatgttcttcatctagcaacaagcagtgagggggacaagtgtcag
cagttggtagagtctccacatgtctttccgtccaatgcacaaatgggtgaggtgctcacc
accctggcagggcccatgggtgtcctcttcatcaacgccactgaccctgccgaggaaaag
aactgggtcaccattcccagggaggacctgaagaagactttcagagagctgggcctcggg
aaccacagctcggttctcgttcaggattctagagatgataacagtgtgctcctcaaacaa
gggaagtggttcagtggtatgagtgagatcagctggctccaggttcaaaatctatgcgga
ttagaatccgaagagaagcaagtaaaaatatcagcaactatgaacacagtggtgtttgat
attcgaatcaaagccataaaggaattaaaattaatgaaggaactagctgagaacagctgt
ttgagacctatcgacagaaatgggaagctactttgtccagtgccggacagttacactttg
aaggaagcggaactgaagatggggagttccctgggactgtgtcctggaaaagcgccaacc
tcatctcagctgttcctgtttttcactgtgggaagtgatgttcagccgggtacagagatg
gagatcatagtagaagcaacaatgtctgtgggagactgtttaaagctcctgctggagaag
tctggcctgccaggagacacatggcatttacgaaaaatggattggtgttatgaagctgga
gagcctttatgtgaagaagatgcagccctgagagaagttgcgatacgttctggagatact
ttgcttttaattgaaggaaaacttcctcctccgggtttcctgagggttcccgtttggtgg
taccagcctggggggcccacgggtcactggaagagtccggtccggatgaacagcacccct
tccccagatgctcctggcgacccgcatggggaggtttccctccgcttcctgggggacctg
gagatctccgaagacaccactgtggcagagctcaaggcccaggccatgaccttgtccccc
tcctcggagttggtcatcccctccccagccttcctcagagcctggaccatggaaggccag
cgccccagcaggcttttacgtgccaaccagcagcagctcaaggaatacaaactgggaagg
aaaactgagatctgcttagagccccttgagaaagaagaaaatttgggcccccatgacgtg
gtgctgaggacgcagatgcgcctccctggcgagagggcctacactccctgcgtggacctg
gtgtgggacaccgcccgcggctggacggccagctccctgcggcagcaggtcgcctacttc
tgctctctgcccgtggagaaaattgaaattgccaagtacttcccggaaaagtttgagtgg
cttccgatatcgagctggaaccagcaacttaccaagaggaaaaagaagaaaaagcaagat
aatttgcagggggcaccttattatttgaaagatggagacacgattggtattaagaatctc
ctggttgaggatgacgaagatttcagtacagtcagagatgacctgggaaaggaaacacag
aagcagctcactctgggaaagaaaagccaagaagcccttcgtgtgccaagcagtgacctt
ttctccggtgccaagatacccagccggccccgcgcaccagaagcttctctttccatccat
gtcgggagtttccgatag
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