Mustela nigripes (black-footed ferret): 132020575
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Entry
132020575 CDS
T09425
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03040
Spliceosome
mnp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132020575 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132020575 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnp03041
]
132020575 (PRPF19)
04121 Ubiquitin system [BR:
mnp04121
]
132020575 (PRPF19)
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132020575 (PRPF19)
Enzymes [BR:
mnp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132020575 (PRPF19)
Spliceosome [BR:
mnp03041
]
Complex B
Other components
Prp19 complex
132020575 (PRPF19)
Complex C
Prp19-CDC5 complex
132020575 (PRPF19)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
U-box type E3
132020575 (PRPF19)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
132020575 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
U-box
PROPPIN
eIF2A
Cytochrom_D1
RMC1_N
zf-Nse
Nup160
DUF1830
ATG16
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
132020575
NCBI-ProteinID:
XP_059260695
LinkDB
All DBs
Position
1:10262712..10273243
Genome browser
AA seq
504 aa
AA seq
DB search
MSLICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPSVAGAGEPMDLGELVGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPADTNKILTG
GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQ
VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSLTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtccctgatctgctcgatctccaatgaagtgccagagcacccgtgcgtgtcccccgtc
tctaatcatgtttacgagcggcggctcattgagaagtatattgcagagaacggcacagac
cccatcaacaaccagcctctgtctgaggagcagctcattgacatcaaagttgctcaccca
atccggcccaaacctccctctgctaccagcatcccagccattctgaaagccttgcaggac
gagtgggacgcagtcatgctgcacagcttcactctgcgccagcagctgcagacaacccgc
caggagctgtcccacgctctgtaccagcacgatgctgcctgccgtgtcatagcccgtctc
accaaggaagttacagctgcccgagaagctctggccaccctgaagcctcaggccggtctc
atcgtgcctcaggccgtgccaagctcacagccaagtgtcgcgggtgcaggcgagccgatg
gatttgggcgagttggtgggaatgacccccgagattatccagaagcttcaagacaaggcc
actgtgctcaccacggagcgtaagaagagagggaagacggtgccagaggagctggtgaag
ccggaggagctgagcaaataccggcaggtggcctcacacgtgggcttgcacagtgccagc
attcctgggatcctggccctggacctctgccctgccgacacaaacaagatccttactggt
ggggcagataaaaatgttgtcgtcttcgacaagagttctgagcaaatcttggccaccctc
aaaggccataccaagaaagtcaccagtgtggtgtttcatccttcccaggagctggtcttt
tctgcctctccagatgctactatcaggatttggtcggtcccgaatgcctcttgtgtgcag
gttgttcgggcgcacgagagcgctgtgacaggcctcagccttcatgccactggggactat
ctcctgagctcctctgatgaccagtactgggctttctctgacatccagacagggcgtgtg
ctcaccaaggtgacagatgagacctctggctgctctctcacctgtgcgcagttccacccc
gatggactcatttttgggacaggcaccatggactcgcagatcaagatctgggatttgaag
gagcgcactaacgtggccaacttccccggccactcgggccccatcaccagcattgccttc
tcggagaatggctactacctcgccacagcggccgatgattcctctgtcaagctctgggat
ctgcgcaagcttaaaaacttcaagacgctgcagctggataacaacttcgaggtgaagtcg
ttgatctttgaccagagcggcacctacttggcgctcgggggcacggatgtccagatctac
atctgcaaacagtggacagagattcttcatttcacagagcatagcggcctgaccacaggc
gtggcgtttgggcaccacgccaagttcatcgcttcaacgggcatggacaggagcctcaag
ttctacagtctgtag
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integrated database retrieval system
