Morus notabilis: 21396488
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Entry
21396488 CDS
T07292
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH6
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mnt
Morus notabilis
Pathway
mnt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
21396488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21396488
Enzymes [BR:
mnt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
21396488
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
21396488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
R3H
OB_NTP_bind
DEAD
HA2_C
HA2_N
Ank_5
Ank_2
nSTAND3
AAA_22
AAA_19
ATPase
ResIII
AAA_25
ABC_tran
AAA_7
TsaE
SRP54
AAA_16
NACHT
Ank_4
Motif
Other DBs
NCBI-GeneID:
21396488
NCBI-ProteinID:
XP_010093187
UniProt:
W9QSU0
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MAGKNRKGGKASVSEGAGIHIRRALDRFQASNAKVYTFEAGMSNQERAFVHDLCRRRGMK
SKSSGRGNQRCVAVFKNKKKAEDNKELEGVTSLSFSKEAELVLQDLFTRFPPEEGEEGQA
TVGGISGKIPNVHRWRDDMFCRPLMSKEQIAKKVESLASKIKNDAQLRQVTAGRSKLPIA
AFRDVITSTVESNQVVLLSGETGCGKTTQVPQFLLDYMWAKGKACKIVCTQPRRLSAMSV
AERVSYERGEEVGENIGYKVRLESKGGRSSSIVFCTNGLLLRVLVSKGVHLGSNKRLQQR
GVPQMTHIIVDEIHERDRFSDLMLAIIRDMLPSFPYIRLIMMSATLDAERFSQYFGGCPI
IRVPGFTYPVRTFYLEDVLSILKLKGNNHLDSSISHFALEESELSVEDKLVLDEAINLAW
SNDVFDPLLELVSSEGTRKVYNYQHSLSGLTPLMVFAGKGRIGEVCTLLSFGADCQLQTK
EGLTALELAEREDQKETVDILKRHAELTLSNSVAEEQLLEKYLAEMNQDIVDVVLIEQLL
MKICTDSTDGAVLIFLPGWDEINKIRDRLLMNPLFKDTLKFNVLALHSMIPSIEQKKVFD
RPPSGCRKIVLSTNIAETAVTIDDVVYVIDSGRMKEKNYDPYNNVSTLQSSWVSKASARQ
REGRAGRCQPGICYHLFSKLRAASLPDFQVPEIRRMPVEEICLQVKMLDPDCKVEDFLQK
TLDPPVIETIRNAIVVLQDIGALTPEGNLTELGEKLGSLPVHPVTSKMIFFAILMNCLDP
ALTLACAADYKDPFTLPMLPHERSKAEAAKAEFASLYGGRSDQLAVVAAFECWKKAKERG
QEKDFCAQYFVSAKTMQMLSRMRKQLQNELIQNGLIPEDVSHCSLNARDPGILHAVVVAC
LYPMVGRLVPPNRSGKRIFVDTSNSVKVILHPKSSSFKLSLGKTDRPLVMYDEITRGDSS
TYIRNCTIVGPLPLLLLSTEIAAASALDDDEGDDESGEDVTDIDKKSGGAHEDKIMSLPE
NLVNVVVDRWLYFRSTALAVAQIYLLRERLSAAILFTVKHPQEVLPPVLWTSVYAIACIL
SFDGLSGVSLPTEPVDSLTSMVNATEIDKSILEKGLPPQNTDNFLRTLFMDTHSHDHNNN
NRTSTFRGASNARNLLNSNKNGTGILGSYGQEGGSPYNRKGDLHKRQRGNGARTYRGNKR
RTVFAKPFQIPVLLFLDFCSFS
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaaaaacaggaaaggaggtaaagctagcgtttctgaaggcgctgggatccat
atccgccgagctcttgaccggtttcaagcctccaacgccaaagtatacacatttgaggct
ggtatgtcaaaccaagaacgtgctttcgtgcatgatttatgcagaagacggggtatgaaa
tccaagagttccgggcgcgggaatcaacggtgtgttgctgttttcaaaaataaaaagaag
gcggaagacaacaaagaattggagggcgtcacttctctgtcattttccaaggaagcagaa
ttggtattgcaggatctatttacgcgttttccgcctgaggagggggaagagggccaagcg
acggttgggggaatcagtggaaagattcctaacgtacatcggtggagagatgatatgttc
tgtaggccgttaatgagcaaagaacaaattgcaaagaaggtggaatcacttgcttctaaa
ataaagaatgatgcacagttgagacaggttactgcagggaggtctaagcttccaatagca
gcctttagggatgtgattacctcaacggttgaatctaatcaggtagttcttttatctggc
gaaactggatgtggaaagactacacaggttccacaatttcttttggactatatgtgggca
aagggcaaggcatgtaaaatagtgtgtacacaacctcgacgtctctcagccatgtcagtt
gctgagcgagtctcttatgaaagaggagaagaagtcggggagaatattggatacaaggtt
agattagaaagtaaaggagggaggtcatcatcaattgtgttctgcacaaatgggcttctg
ctgagagttctagtttctaaaggagtccacctgggttcaaataagagactacaacagcga
ggcgttcctcagatgactcacattattgtggatgaaatccatgaaagggatcgcttctca
gatctcatgctggctattatcagagacatgcttccttcgttcccttatattcgcctgata
atgatgagtgcaactcttgatgctgaacgcttttcgcaatattttggtggctgcccaata
atccgagtccctggtttcacatatcctgtaagaacattctatttggaggatgtactttct
atccttaaattaaagggcaacaatcaccttgatagtagtatatcacattttgcactcgaa
gagtctgagttatcggtggaagataagcttgttttagatgaagctattaatttggcttgg
tcaaatgatgtgtttgatcctcttctagagttggtttcttctgaaggaaccagaaaagtg
tataattaccagcattccttgagtggtcttacaccattaatggtgtttgctggaaagggt
agaattggagaagtatgcacgctcctatcttttggtgcagactgccaattacagaccaag
gagggattaactgcacttgagttggctgaacgtgaagaccagaaagaaactgttgacatt
ttaaaaagacatgcggaacttactctttccaactctgtggcagaagaacagttacttgag
aaatatcttgcagaaatgaatcaggatatagttgatgttgttcttatagaacaattatta
atgaaaatttgtactgattcaacggatggggctgttcttattttcctcccagggtgggat
gaaataaataaaatccgtgacaggttacttatgaaccctttattcaaagatactttaaaa
tttaatgtattagctcttcattccatgattccatccatagagcaaaagaaggttttcgac
cgcccaccttctggttgccgcaaaattgttctgtcaaccaatattgctgaaactgccgta
acaattgatgatgtcgtttatgtcatagacagtggtcggatgaaagaaaaaaactatgat
ccttataacaatgtatcaactcttcaatcgtcttgggtctcaaaggccagtgccaggcag
agagagggacgtgcaggtcgctgtcagcctggaatctgttatcaccttttctccaaactt
cgagcagcttctttgccagatttccaagttcctgaaattaggaggatgccggttgaggaa
atttgtctgcaggtgaaaatgcttgatccagattgtaaggtagaagatttcttgcagaag
acattagatcctccagttattgagaccatacgaaatgcaatcgttgttcttcaagacatt
ggggctttgacacctgaaggaaatcttacggagcttggagagaagctaggttctctccct
gttcatccagtcacaagcaagatgattttctttgccatattgatgaactgtctggaccct
gcgttgactctggcatgtgctgctgactacaaggacccatttactcttcccatgttacct
catgaaagaagcaaagctgaagccgctaaagctgagtttgcctcattatatggaggtcgt
agtgaccaactagcagtggtagccgcatttgagtgctggaagaaggcaaaggaaaggggc
caggagaaggatttttgtgctcagtattttgtgtctgcgaaaacaatgcaaatgttgtct
cgtatgcggaagcagctccagaatgagcttatacaaaatgggcttattcctgaggatgtc
tcgcattgtagcttgaatgcacgtgacccgggtatactccatgctgttgtcgtggcttgt
ttgtatccaatggtggggagattggttccacctaacaggagtgggaaacgaatatttgta
gatacttctaattctgttaaagttattttgcatcccaagtcatctagttttaagttatca
cttgggaaaactgatcgtcccttagttatgtatgatgaaataacacgtggagatagtagt
acgtacattaggaactgtacgatcgtcgggccgctgccactgctattgctttcaacagaa
attgctgctgcctcagctttggatgatgacgagggtgatgatgaaagtggagaagatgtg
acagacattgataaaaagtcaggtggagctcatgaagacaaaattatgtcattacctgag
aatctggttaatgtcgtagtggaccggtggctttattttaggtcaacagcacttgctgtt
gctcagatttacttgttgagggaacgtttatcggcagcaatcttgttcacagttaaacat
ccacaggaagttttgcctcctgttctttggacctcagtatatgctatagcatgcatccta
tcttttgatggtctctctggtgtctcactgcccacagaaccagtggattcactaacttca
atggtaaatgctactgagattgacaagtctatactggaaaagggtttgccgccacagaac
acggacaacttcctcagaacactttttatggacacccattcccatgaccataacaataac
aatagaacatctacctttcggggagcatcaaatgcaagaaacctgctaaattccaacaag
aatggtaccggcatccttggatcatacggtcaggagggaggttcgccatacaatcgaaag
ggtgatttacataagcggcagcgagggaatggcgccaggacatataggggaaacaagcgc
cgcaccgtttttgctaaaccttttcagattccagtgcttttgtttttggatttttgctcc
ttttcttag
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integrated database retrieval system
