Microvirga ossetica: BB934_21785
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Entry
BB934_21785 CDS
T05139
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
moc
Microvirga ossetica
Pathway
moc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
moc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BB934_21785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moc03400
]
BB934_21785
DNA repair and recombination proteins [BR:
moc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BB934_21785
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BB934_21785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
DnaJ_CXXCXGXG
nSTAND1
AAA_29
AAA_16
DUF4350
AAA_33
AAA_25
RsgA_GTPase
DUF5351
Motif
Other DBs
NCBI-ProteinID:
ANY80533
UniProt:
A0A1B2EKL5
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Position
4602035..4604581
Genome browser
AA seq
848 aa
AA seq
DB search
MPKNSKFRSPTAMREGTGFVRVRGAREHNLKNIDLDIPRDALVVFTGVSGSGKSSLAFGT
LYAEAQRRYLESVSPYARRLFHQMPVPDVDDVDGLPPAVALQQQRGSPTTRSSVGSVTTL
SNLLRMLYSRAGDYPRGQAILYAESFSPNTPEGACPRCHGLGRVYEVTEQSMVPDDSLTI
RERAIAAWPTAWHGQNLRDIATTLGFDVDRPWKDLPKKDRTWLLFTDEQPTVPVYPGYTQ
QEVRRALKRKEEPAYQGTFTSAKRHVLHTFANTQSPLMKRRVAQYMVSTECPLCHGKRLR
QESLSVKFAGLDIADISGLPLARLSDIFRPYADGTASRRSKIEAEHPEKAVVVQRIAQDL
VARLSVMLDLGLGYLAIDRSTPTLSPGELQRLRLATQVRSNLFGVVYVLDEPSAGLHPAD
TEALLNALGQLKASGNSQFVVEHNLDVIRHADWIVDVGPGAGEQGGFVLYSGPPDGLGQV
EASQTRRFLFGESPLPPREPRAPKDWLRLAGITRNNLDGLDVAFPLGVFTSVTGVSGSGK
SSLVSQALVELVAEHLGHDIPAQEEEGEELERAAVVPASGRIVGGMKGIKRLVRVDQKPI
GRTPRSNLATYTGLFDHVRKLFAATRQARARRYDAGRFSFNVAKGRCPHCEGEGFVMVEL
LFLPSVYAPCPTCHGARYNAETLKIKYQDRSIADVLGMTVDAAWEFFADEPHLHRSLTIV
REVGLGYLRLGQPATELSGGEAQRIKLATELQRIQRGDTLYVLDEPTTGLHPADVERLIS
QLDGLVEAGNTVIVVEHDMRVAARSDWVMDLGPGAGDEGGRVVASGPPDEVAKASGSRTA
PYLAQALA
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaacagcaagttccgatctccgacggccatgcgggaaggaaccggctttgtc
cgcgtccgcggggcccgcgagcacaatctcaagaatatcgatctcgacattcctcgcgac
gccctggtggtgtttacgggcgtctccggttccggaaagtcgtcgctcgccttcggaacc
ctttatgccgaggcgcaacggcgatatctcgagtcggtgtcaccctatgcgaggcgactg
ttccatcagatgcccgtccccgatgtggacgacgtcgatggcctgccgcctgccgtcgcg
ctgcagcagcagcgcggctcgccgaccacgcgctcctccgtgggcagtgtcacgaccttg
tccaacctcttgcgcatgctttattcccgcgccggagactatccgcgcggccaggcgatc
ctctatgccgagtcgttctcgcccaataccccggagggggcctgtccccgatgccatggc
ctcggccgggtctatgaggtcaccgagcaatcgatggtgccggacgactcgctgacgatc
cgcgagcgtgccatcgccgcctggccgaccgcctggcatggccagaatcttcgcgacatc
gcgaccacgctcggcttcgacgtcgatcgtccctggaaggatctgcccaagaaggaccgc
acctggctgctcttcacggacgagcagccgaccgttccggtctatccgggatatacgcag
caggaggttcggcgcgcgctcaaacgcaaggaagagcccgcctatcagggaacgttcacg
agcgccaagcgccacgtgctgcacaccttcgccaatacgcaaagcccgctgatgaagcgg
cgcgtggcgcaatacatggtgagcaccgaatgccccctctgccacggcaagcgccttcgg
caagagtccctgtccgtcaagttcgcggggctggacatcgccgacatctccggcctgccg
ctcgcccgcctctccgacatctttcgcccctatgcggacgggacggcctcacgaaggtcg
aagatcgaggcggagcatccggaaaaggcggtggtcgtgcagcgcatcgcgcaggatctt
gtcgcccggctcagcgtcatgctcgatctcgggctcggctatctcgccatcgatcgcagc
accccgacgctttcgcccggcgagctccagcggctgcggctcgccacccaggtgcgctcg
aacctgttcggtgtggtctatgtgctcgacgagccgtcggccgggcttcatcccgccgat
accgaggcgctgctgaatgcgcttgggcagctgaaggcgtccgggaattcgcagttcgtg
gtcgagcacaatctcgacgtgatccgtcacgccgactggatcgtcgatgtcggtccgggc
gccggcgagcagggcggcttcgtgctctatagcggcccaccggacgggctcggacaggtc
gaggcctcgcagacacggcgcttcctgttcggcgaaagccctctcccgcctcgggagccg
cgcgcgccgaaagactggctgcgcctcgccggcatcacgcgcaacaacctggacgggctc
gatgtcgcgtttcccttgggcgtgttcacgagtgtcacgggagtgtccggctccggcaag
tcgagcctggtcagccaggccctggtcgaactggtcgcggagcatctcggccatgacatc
cccgcgcaggaggaagagggggaggagctcgagcgggcagcggtcgtccccgccagcggc
cggattgtcggcggcatgaaagggatcaagcgcctggtgcgggtcgatcagaagccgatc
gggcgcacgccgcgctcgaatcttgccacctataccggccttttcgatcatgtccgcaag
ctctttgccgcaaccaggcaggcgcgcgcccgtcgctacgatgcgggacgcttttccttc
aacgtcgccaagggacgctgtccccattgcgagggcgaaggcttcgtgatggtcgagctg
ctgttcctgccgagcgtttatgcaccttgcccgacctgtcatggggcgcggtacaatgcc
gagacgctgaagatcaaataccaggataggtccatcgccgacgtgctcggaatgacggtc
gacgcggcctgggagttcttcgccgacgagccgcatctgcatcgctccctcacgatcgtg
cgcgaggtgggtttgggctatctgcggcttggccaacccgcgaccgaattgtccggaggg
gaggcgcagcggatcaagcttgcgacggagctgcagcggatccagcgcggcgacacgctc
tacgtcctcgacgagccgaccaccggcttgcacccggccgatgtggaaaggctcatctcc
cagctcgacgggctcgtcgaagccggcaataccgtgatcgtggtcgagcacgacatgcgt
gtcgcggcgcgaagcgactgggtcatggatctcggtccgggagccggtgacgagggcggg
cgggtggtggcatcggggccgccggacgaagtggcaaaagcatcgggcagccggacggcg
ccttatctggcgcaagctctcgcttga
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