Myroides odoratimimus: AS202_08070
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Entry
AS202_08070 CDS
T04190
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mod
Myroides odoratimimus
Pathway
mod02020
Two-component system
mod02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mod00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AS202_08070
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AS202_08070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mod03021
]
AS202_08070
Transcription machinery [BR:
mod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AS202_08070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
Crp
Flavi_NS5_thumb
DUF3853
Motif
Other DBs
NCBI-ProteinID:
ALU26105
UniProt:
A0A0S7E590
LinkDB
All DBs
Position
complement(1769902..1771356)
Genome browser
AA seq
484 aa
AA seq
DB search
MLKQSLQLKLSQKLSPQQIQLMKLIQLPTLAFEQRLKEELIENPALETGKENESTDVDEF
DNDFEDYDNERIEAEDINIDEYLSDDETPDYKLQANNYSKDDDEYEMPIIAHESFHQDLL
NQLNTFMLNDSDRKIAEFLVGSIDDMGYLRRETQDLVDDLAFTQGIYTDEETVERILLIV
QELDPAGVGARDLQECLLLQLKHKTQSDAVDLATEIIADQFDAFTKKHYDKLLQRYGVSK
EKLRNAIDEIEKLNPKPGGAYIGNERTIEHVVPDFTIKINEGELELLLNGRNAPELHVSK
DYQEMLQSYKESAKSSSAQKDAVQFIKQKLDGAKWFIDAIKQRQETLFVTMHAIVEYQEE
YFLTGDETKLKPMILKDIADLVGLDISTVSRVANSKYVDTPYGTKLIKNFFSEAMVNDQG
EEVSTLEIKKILQNIIGEEDKKKPYPDDKLAELLKDKGYPIARRTVAKYREQLDIPVARM
RKRI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaaagtttacaactcaaattatctcaaaaattatctcctcaacaaatccag
ttgatgaagttaatacaattacccactttagcttttgaacaaaggctgaaggaagagcta
attgagaatcctgcgctagagactggtaaagaaaatgagtctacagacgtagatgaattt
gacaatgactttgaagattatgacaatgaacgcatagaagcagaagacatcaatatagat
gaatatctaagtgatgatgaaactcctgactataaattacaagcgaataactacagtaaa
gatgatgatgagtacgaaatgcctatcatcgcacatgaatcatttcatcaagatctgtta
aatcaattaaacaccttcatgttaaatgatagcgacagaaagattgcagagttcttagtg
ggaagtatcgatgatatgggatacttaagacgtgaaactcaagatctagtagatgactta
gcattcactcaaggtatctatactgacgaagagactgtagaaagaatattactaatcgta
caagaactagaccctgctggtgtaggcgctagagacttacaagagtgtcttctgttacag
ttaaaacacaaaacacagtcagatgctgtagatctagctacggaaattatagcagatcaa
ttcgatgcttttacaaaaaaacattacgataaactattacagagatatggtgtttctaaa
gaaaaacttagaaacgctatcgatgaaatagaaaaactaaatccaaaaccaggaggagct
tatatcggtaatgaacgcactatagaacatgtagtgcccgactttacaattaagattaat
gaaggtgaacttgagcttttattaaatggaagaaacgcacctgaacttcacgtctctaaa
gattatcaagagatgctacagtcgtataaggaatctgcaaaatcttctagtgcacagaaa
gatgctgtacaattcatcaaacaaaagctagatggtgctaaatggtttatcgacgcaata
aaacagcgtcaagaaacattatttgtaaccatgcacgctatcgttgaataccaagaagaa
tactttctgacaggagatgagaccaaactaaagccaatgatcttaaaagacattgctgat
ttagtaggactagatatctctaccgtgtcaagggtagctaacagtaaatatgtagataca
ccttatggtactaaattaatcaagaacttcttctctgaagcaatggttaatgatcaaggt
gaggaagtctctacattagaaattaaaaagatactacaaaatatcatcggtgaagaggac
aagaaaaaaccttatcctgatgacaagctagcagagttacttaaagacaaaggataccct
atcgctagacgtacagtagctaaatatagagaacaattagacattcctgtagcgagaatg
cgtaaacgtatttaa
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