KEGG   Methanothermococcus okinawensis: Metok_1276
Entry
Metok_1276        CDS       T01534                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mok  Methanothermococcus okinawensis
Pathway
mok03030  DNA replication
mok03410  Base excision repair
mok03420  Nucleotide excision repair
mok03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mok00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metok_1276
   03410 Base excision repair
    Metok_1276
   03420 Nucleotide excision repair
    Metok_1276
   03430 Mismatch repair
    Metok_1276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mok03032]
    Metok_1276
   03400 DNA repair and recombination proteins [BR:mok03400]
    Metok_1276
Enzymes [BR:mok01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Metok_1276
    6.5.1.6  DNA ligase (ATP or NAD+)
     Metok_1276
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Metok_1276
DNA replication proteins [BR:mok03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metok_1276
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Metok_1276
DNA repair and recombination proteins [BR:mok03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metok_1276
   NER (nucleotide excision repair)
    Other NER factors
     Metok_1276
   MMR (mismatch excision repair)
    Other MMR factors
     Metok_1276
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase DUF1548
Other DBs
NCBI-ProteinID: AEH07244
UniProt: F8ALL2
LinkDB
Position
complement(1305028..1306770)
AA seq 580 aa
MLFKEVCDIFNKIESTTKRLEKMDYFIELIKLTNKKGSAEDLKKICYITIGRVFAEYENK
ELGIGPSLLIEAVKTIGIDEKKLLNTIKETGDMGMAVEKLSSDIKQISLFQTPPTLDDIY
DTLKKISEIEGANSQKKKIRHISSLLLKASPLERRYIVRLILEDMRIGMNVPTILGAFSV
YFNIPKEKLEKIYAVVNDIGLIAEKLMLNVDIDNDEDLKLRIFRPIKPMLAQLIPSIDDA
IIEMGAPQFETKYDGARVQIHKKNKDVKIYSRKLEDITNSIPEIVEEVKNMDVNNIIVEG
ECVAIDLKTGHPRPFQDILRRFRRKYDIDKMKEEINLRVYLFDILYYNKPLIDLPLKERR
EILENIVGTNDWEKDKIKIENEIKSKKKIDISYKLTTDNIKKALEFYKWSLSIGHEGVMI
KNPNAPYTPGSRVKTMYKFKPTLESLDVVITKAKIGMGKRKDWYGSFEISVRDEEGNLYP
IGHVGSGLSEEELGKLTEMINSIKINEIDGETIVEPKIVLEVTYEEIQESDKYECGYALR
FPRVVRIRDDKSVDDINTIDDVKRIFAIQKGKSKKFMKGD
NT seq 1743 nt   +upstreamnt  +downstreamnt
atgctgtttaaagaagtatgcgatatatttaataaaatagaaagcacaacaaaaagattg
gaaaagatggactattttatagaattaataaaattaacaaataaaaaaggttcagcagag
gatttaaaaaaaatatgttatattaccatagggcgagtatttgcagagtatgaaaataaa
gagctcggtataggtccaagccttttgatagaagctgtgaaaacaataggcatagatgag
aaaaagttattgaataccataaaagaaactggggatatgggaatggcagttgaaaaactg
agctccgatataaaacaaatatccctatttcaaacaccaccgactcttgacgatatatac
gacactctaaaaaaaatatcggaaattgaaggagcaaactctcagaaaaaaaagataaga
catatttcaagcctacttctaaaagcttcgccactggaaaggaggtatattgtaaggctt
attttagaggatatgagaataggaatgaatgttccaacaattttaggtgcattttctgtg
tatttcaatattccaaaggaaaaattggagaaaatctatgcagttgtaaatgatattggg
cttattgcagaaaaattaatgttaaatgtagatattgacaatgacgaggatttaaagcta
agaatatttagacctattaaacccatgcttgcacaacttataccttcaattgatgatgcc
ataattgaaatgggagctccgcagtttgaaacaaaatacgatggtgcaagggttcaaatc
cataaaaaaaataaagatgttaaaatatacagtagaaaactggaagatattacaaattca
atccctgagatagtggaagaagtaaaaaatatggatgtaaataatataatagtagaagga
gaatgcgtagctatcgacttaaaaactggacatccaagaccatttcaggacatattacga
agatttagaagaaaatatgatattgacaaaatgaaagaggaaataaatttaagggtttat
ttatttgatattttatattataataagccattaattgatttaccactaaaagaaagaaga
gaaatacttgaaaatatagtaggaacaaatgattgggaaaaggataaaataaaaatagaa
aatgagataaaatcaaagaagaaaatagatatatcctataaactaacaacagataacata
aaaaaagcattggaattttataagtggagtttaagcataggtcatgagggggtgatgatt
aaaaatccaaatgcaccatataccccaggtagcagagtaaaaacgatgtataaatttaaa
cctacattggaaagccttgatgtagtgattacaaaggcaaaaataggtatgggtaagagg
aaggattggtatggttcctttgaaatatctgttagagatgaagaaggaaatttatatcca
attggtcatgttggaagtgggttaagtgaggaggagctcggcaaattaacggaaatgata
aattcaattaaaataaatgaaatagatggagaaacaattgtagaaccaaaaattgtttta
gaggtgacctatgaagaaattcaagaatccgataaatatgaatgtggttatgcccttaga
tttccaagggttgttaggataagagatgataaatcggttgatgatataaataccattgat
gatgtaaaaagaatatttgcaattcaaaaaggtaaatctaaaaaatttatgaaaggagat
taa

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