Methylobacterium oryzae: MOC_1250
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Entry
MOC_1250 CDS
T03299
Name
(GenBank) ECF subfamily RNA polymerase sigma-24 factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mor
Methylobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mor03021
]
MOC_1250
Transcription machinery [BR:
mor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MOC_1250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
NepR
Sigma70_ECF
DUF134
HTH_23
HTH_28
GerE
Motif
Other DBs
NCBI-ProteinID:
AIQ89005
UniProt:
A0A089NR42
LinkDB
All DBs
Position
complement(1249216..1249956)
Genome browser
AA seq
246 aa
AA seq
DB search
MTRDDTDTVLSQEDGTRDGRPNLAPGIRTHLGEHLRTVYERIGEETLPSRFAELIEKLEA
ALRARGEAIEPEFRNGLLAAVPSLRAFALSLTSNPARSDDLVQDTLLKGWQHRARFQPGT
NLNAWLFTILRNIFYSDHRKRVREVEDQDGSYAARLATAPHQGDRLDVEDLQSALAKLPP
DQREALVLVGAEGVSYEEAAAIMGCKVGTVKSRVSRARGRLAELLGYDEEDLGSDRFIQS
AMPKDA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcgacgacaccgacaccgtcctgtcccaggaggacgggactcgggatggccgc
ccgaacctggctcccgggatccgcacgcatctcggggagcatctgcgcaccgtctacgag
cggatcggcgaggagacgctgccgtcccgcttcgccgagctgatcgagaagctcgaggcg
gctttgcgcgcccgcggcgaggcgatcgagccggaattccgcaacggtctgctcgcggcc
gtcccgtccctgcgcgccttcgcgctgtcgctgacgtcgaaccccgcccgttcggacgat
ctcgtgcaggacaccctgctcaagggctggcagcaccgcgcccggttccagccggggacg
aacctcaacgcgtggctgttcacgatcctgcgcaacatcttctactcggatcaccgcaag
cgggtgcgcgaggtcgaggatcaggacgggtcctacgcggcccggctcgccaccgccccg
caccagggtgaccggctcgacgtcgaggatctgcaatcggcgctggccaagctgccgccg
gatcagcgcgaggccctggtcctggtcggcgccgagggcgtctcctacgaggaggccgcc
gccatcatgggctgcaaggtcggcacggtgaagagccgcgtcagccgcgcccgtggcagg
ctcgcggagctgctgggctacgacgaggaggatctcggctccgaccgcttcatccagtcg
gcgatgcccaaggacgcgtga
DBGET
integrated database retrieval system
