Marasmius oreades (fairy-ring mushroom): E1B28_001010
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Entry
E1B28_001010 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
E1B28_001010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
more03021
]
E1B28_001010
03036 Chromosome and associated proteins [BR:
more03036
]
E1B28_001010
Transcription machinery [BR:
more03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
E1B28_001010
Coactivators
SAGA/TFTC/STAGA complex
E1B28_001010
Chromosome and associated proteins [BR:
more03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
E1B28_001010
STAGA complex
E1B28_001010
TFTC complex
E1B28_001010
SAGA complex
E1B28_001010
SLIK complex
E1B28_001010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
NBCH_WD40
eIF2A
LisH
RMC1_N
Motif
Other DBs
NCBI-GeneID:
66070086
NCBI-ProteinID:
XP_043015608
LinkDB
All DBs
Position
1:3084451..3087428
Genome browser
AA seq
785 aa
AA seq
DB search
MSANTPPASSSSPSAHTPATQDAPQTASETERAVLEYLHARGYSSAEKALLQAIEDGSSE
DKGKQPETISSQELVETLAVFAQTSSRPGENALKDSGTVLQELTAMGNPSNIQNLISSIA
SVGSEDILSNDHTDKQEGYRELEAWVEGSLDMYRPEFRPILFPIFCHFYLDLIQNGHKDA
ALNFFSLFSPPLAAAHSATLHHLSTLLLPSHVQTDELAQRFRDEKYVIRMSRSGFSLLVG
WLTEGMGGEGLGVGLGFSGEKGKKGRLAVMRVVNNRLRFDVTASNPSSVLPTAWEESTGL
LSSLIPHTNGTASKLNNPQAFNLSKGDLKLGPPPMNEELRTETERILREQAMVERDPAQY
DMAFTRPQPLPGMTAPAETDLLPKPPNFKTIDVEREVNAVRDARRRIKLEPSALHSVDLN
SPQANTARARALPSICAYTLHDVAEGAPCCTFSTDTSLMAAGFSESYVRVWSLKGEKLRG
MRSDFSASSIRDSASLRKVKEKKGSSTRKLIGHSGPVYSVAFDPVSGSAAPPKYLLSASA
DGTTRLWSMDTMTDLIAFRGHENPVWDVKWSPMGIYFATASRDRTARLWSTDRTACLRIY
AGHLGDVDCVQFHPNSLYLATGSSDWTARLWDVQRGSCLRVFIGHQGPISSIAISPDGRM
LASAGEDLAINLWDLGSGKRIKKMTGHTASIYSLTFSAESSLLVSGGADWTVRCWDVKGV
GGNNKLRENGTSYSDSISDNISTGNLDSTDLLATFPTKRTPIINVQLTPRNLCLVAGVYQ
PPESR
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaaacacacctcctgcatcctcaagttctcccagtgcacataccccagctaca
caagatgcaccacaaacggcttcggaaacagaacgcgcagtccttgaatatcttcatgcc
cgcggttactcatctgctgaaaaggcacttctccaagccattgaagatggctcctcagaa
gacaaaggaaaacaaccagagacaatcagctcacaagaactcgtcgaaaccttagcagta
tttgctcaaacttcgtctcgtccaggagaaaatgcgttgaaggattctggcactgtgctt
caagaattaacagctatgggaaacccttcgaatatacagaatctcatatcaagtatagca
tctgttgggtctgaagatattctctcgaacgatcatacggataagcaagaaggttatcgg
gaactagaggcatgggtggaaggctcgctagatatgtatcgacccgaatttcgacccatt
ttgtttcctatattttgccatttttatcttgacttgattcagaatggacataaagatgca
gccctcaacttcttctcccttttctcaccaccgctcgcagctgcacattcggcaactttg
catcatctctctactttgctcttaccttcacatgttcaaaccgatgaattagctcagcgg
tttcgcgacgagaaatatgttatccgaatgagccgttctggcttcagtttactcgttggc
tggctcacggaaggtatgggaggtgaaggcctaggtgttggacttggcttttccggtgag
aaagggaagaagggtcgattggcggtgatgagggtggtgaacaatcgcctccgtttcgac
gtcactgcctccaatccatcatctgttttaccaaccgcttgggaagaatccactggcctt
ctatcatcactcatccctcacacaaatgggaccgcctccaaattgaacaacccacaagca
ttcaatctatccaaaggcgacttaaagctcggcccccctcccatgaacgaggaactacgg
actgagactgaacgcatactgcgggagcaagccatggtcgagcgagatcccgctcagtac
gacatggcattcacgagacctcaaccactgcccggaatgaccgctcccgcagagaccgat
cttcttcccaaacccccgaatttcaaaacaatcgacgttgaaagagaggtgaatgcggtg
cgagacgctcgaagaagaataaagctcgaaccctccgcccttcattccgtggatctcaac
tcaccccaagcgaacactgctcgagcgcgtgctttgccgagtatatgcgcatacacactc
cacgatgttgcggaaggagctccctgctgcaccttctccactgatacatcacttatggca
gctggcttttctgagagttatgtgcgtgtatggagtctcaagggggaaaagcttcgaggt
atgaggagtgatttttcggcgagttcaatccgtgattctgcatctcttcgcaaggtgaaa
gagaaaaaagggagttcaactagaaaacttatcggtcacagtggtccggtctattctgtc
gcttttgatcctgttagtggctccgctgcaccgccaaaatatcttctctcggcgtcagcc
gatggtacaacgcggttgtggtcaatggacaccatgacggatctcatcgccttccgtgga
cacgagaatcctgtgtgggatgtgaaatggagtcccatggggatctattttgccactgca
agtcgagatcgcacggctagactttggtcgacagatcgaacagcgtgtctgaggatttac
gcaggtcatcttggtgatgtcgactgcgtgcaatttcatccaaactcgctgtatctggcc
accggctcgagcgattggactgctcgtctatgggatgtgcaacgtggatcttgtttacgt
gtttttatcgggcatcaagggcctatctcttcaatagcaataagcccagatgggaggatg
ttagccagtgcaggtgaagaccttgccatcaatttgtgggatttgggatcgggaaaacga
atcaaaaagatgactgggcatactgcctctatttacagcctcacattcagcgccgaatcc
tcactgttggtaagtggaggtgccgactggactgtgcgatgctgggacgtcaaaggggtc
gggggtaacaacaaacttcgtgagaacggcaccagttattccgattctattagcgacaac
atatctactggaaacttggactcgactgatttactcgccacgttccccaccaaacggacg
cccataattaatgttcaactcacacctcgaaatctctgcctcgtggccggagtatatcaa
ccacctgaatcacggtag
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