Marasmius oreades (fairy-ring mushroom): E1B28_009988
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Entry
E1B28_009988 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
more
Marasmius oreades (fairy-ring mushroom)
Brite
KEGG Orthology (KO) [BR:
more00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
more03009
]
E1B28_009988
04121 Ubiquitin system [BR:
more04121
]
E1B28_009988
Ribosome biogenesis [BR:
more03009
]
Eukaryotic type
90S particles
Other 90S particles
E1B28_009988
Ubiquitin system [BR:
more04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
E1B28_009988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
ANAPC4_WD40
NBCH_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
66079064
NCBI-ProteinID:
XP_043007381
LinkDB
All DBs
Position
6:1789062..1790786
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AA seq
444 aa
AA seq
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MVKISLIQHDISSHIPRRPGDPTPTSRNLDPNMHPFARARERTRALNAAKMDRIFAKPFV
GALEGHVDAVEVLAKHPDSVTNIASGSWDGGILVHHLSQRQQLLKLPQAHKGKVSGLCFA
DDSRLLSCGVDRNVKIWKIDGDSDHPLSVLPGKAAINSIDHQRSSPIFATASNLVHIWDE
TKTAPISNLTFPASTETVTAIRFNLSERSILASLGSDRTFALYDIRTSKPERRVVMQMRA
NSLSWSPTMPTSVLLASEDHNLYTFDIRHLAEPTMIYKGHVAAVMSCDWSPTGTEFVSGG
WDRTVRIWQTGQGHSPEVYHTKRMQRVTATLVTTDARFVLSGSDDGNVRIWKTKASEKLG
VVTSRERASMEYRSSLVNRWKVDKEVGKIARTRHLPKPVYSASKLKTTMLEARRVKEERQ
RKHTRSGESKPKAERKKVVLVEQS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatctcactcattcaacatgatatctcttctcacattccgagacgtcctggc
gatccaacgccgacatcccgaaatctcgatccaaacatgcacccttttgcccgagctaga
gaacgaacgagagctttgaacgccgctaaaatggatagaatctttgcaaaaccattcgtt
ggcgctttggaaggacacgtggatgctgtcgaggtgttagccaagcatcccgactctgtg
acgaatattgccagtggaagctgggatggaggaattctcgtacatcacttatcacagcgt
caacaactactaaaactaccacaagcgcacaaaggaaaggtatctgggctttgcttcgct
gatgattcccgtctattgagttgtggcgtcgatcggaacgtgaagatatggaaaatcgat
ggtgattctgaccacccactcagtgttttgcctggaaaggcggctatcaattcaatagat
caccaaagatccagccctatattcgccacagcctctaaccttgttcatatatgggatgaa
accaaaacagctccaatatcgaatctcacgtttcccgcctcgaccgaaaccgtgactgcc
atacgcttcaatctaagcgagaggtcgattctagctagtttaggctcagaccggacgttt
gcactctatgatatccggacctcgaaacccgagcgtcgagtcgtaatgcaaatgcgagca
aattctctctcttggtcgccaacaatgccgacgtcggttcttttggcttcggaggatcac
aacctatacaccttcgacattcgacatcttgctgaacctaccatgatctataaaggccat
gttgcagcagtgatgagctgcgattggtccccgactgggacagaatttgtctccggaggt
tgggatcggacagtgagaatatggcagacagggcaaggacactccccagaggtataccat
acaaaaagaatgcaaagagtgacagcgactcttgtgacaacggacgctcgattcgtcctt
tctgggtccgacgatgggaacgttcgaatatggaaaacaaaggcatctgagaagttgggc
gttgtcacctcaagagaacgtgcctcaatggagtatagaagcagtctggtaaatagatgg
aaggtcgacaaggaggtcggaaaaattgctcgcacacgacacttgccaaaacctgtttac
tctgcttccaaactcaagaccacgatgcttgaggcaagaagggtgaaggaagagaggcag
aggaagcacacaagaagtggcgagagcaagccgaaggccgagcgaaagaaagttgtcttg
gtcgaacaaagctga
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