Microbulbifer pacificus: R5R33_07970
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Entry
R5R33_07970 CDS
T09537
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mpaf
Microbulbifer pacificus
Pathway
mpaf00040
Pentose and glucuronate interconversions
mpaf01100
Metabolic pathways
mpaf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mpaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
R5R33_07970
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R5R33_07970
Enzymes [BR:
mpaf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
R5R33_07970
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GFIT
Motif
Pfam:
Pectate_lyase_4
FMP27-BLTP2_C
Motif
Other DBs
NCBI-ProteinID:
WOX07058
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Position
complement(1826334..1828127)
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AA seq
597 aa
AA seq
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MQTSLQTLLALVLCAGLTACGGGGSDGGSSSSSSSSSSSSSSSGSSSSSSSSSSSSSSSG
GSSSSSSSSSSSGSSSSSGSGSADGGFAGYSYNLTGGAGGLVYTVNNGADLQAKLDEAKD
ASQPITIYIDGTITDFNTGTGTDIQVRDMDNVSLIGVGENGEFDGIGLYIRRANNIIVQN
LKFHEAWPGQEKDNISIEGDDDGSTTSHIWIDHCELYNSMSVGKDYYDGLVDSKSGARYI
TLSYNYLHDAWKTSLHGHTESDTNPDTDRLVTFHHNRFENLESRVPLYRHGKGHVYNNYY
NNIQSTAINSRAGAEMLIEHNVFENTQNPIVSFYSDVIGYWNLKGNVFGTGVTWTAGSGT
DITAQNGESTSSYTVPYGYTLDATDGLKEHVIANAGVGKIDQSGLEIPEPVTPEGEVPVE
EEPLIEDVALPYAENFATDTADFFSNNYRDLSGAPGDGTPMYYRVTGTVELQSGALSLTG
ARVSIGNSTPSVSTTSGDANTGVFDLSAPWQISFKVVSVGGDTSKYFQLYVDNNTSSSSN
SLWGTSSKFHQIYLSELVAGQAYTVPGLTASSNSFITLRTESGATVVVDDLLIEAVP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacctcattgcaaacactactggcgctggtactctgcgccggcttaaccgcctgt
ggcggtggtggcagcgacggcggcagctccagtagctcgtccagcagcagttcttcaagt
agttccagcggcagctcctccagcagttcgagcagctcttcctcaagctcatccagcggt
ggttcttccagttcgtccagttcctcgagctcgtccggcagttccagttcctccggcagt
ggcagtgccgatggcggctttgctggctacagttacaatctcaccggcggtgccggcggg
ctggtttacaccgtcaataacggcgccgacctgcaggcgaagctggacgaggccaaggac
gcaagtcagccgatcacgatttatatcgatggcaccattaccgatttcaataccggcacc
ggaactgatatccaggtacgcgatatggataatgtgtcgctgatcggtgtgggtgaaaac
ggcgagttcgacggtatcggcctgtatatccgccgcgccaacaacatcatcgtgcagaac
ctgaagttccacgaagcctggcccggccaggaaaaggacaatatcagtatcgaaggggac
gacgacggctccaccaccagccacatctggatcgaccactgtgagctgtacaactccatg
tctgtgggcaaggactattacgatggcctggtggattccaaaagcggtgcgcgctatatc
accctgtcgtacaactacctgcacgacgcgtggaaaacttccctgcacgggcataccgaa
agcgacaccaatccggataccgatcgcctggtgaccttccaccacaaccgtttcgaaaat
ctggaatcccgtgtgccgctgtaccgccacggcaagggccacgtgtacaacaactactac
aacaatatccaatccacggcgatcaactcccgcgccggtgcggaaatgctgatcgagcac
aacgtgttcgagaatacccagaatcccatcgtgtccttttactcggacgtgatcggttac
tggaacctgaaaggcaacgtgttcggcaccggggtcacctggaccgccggcagcggcacc
gatatcaccgcgcaaaacggtgaatccacctccagctacaccgtgccctacggctatacc
ctcgacgcgaccgatggtctcaaggagcacgtcattgccaatgcgggcgtcggcaagatc
gaccagtcgggtcttgaaattcccgagccggtgacaccagaaggtgaagtgccggtagaa
gaggagccgctgattgaggacgtggcgctgccctatgcggaaaactttgccaccgatacc
gcggacttcttcagcaacaactaccgcgatctcagtggcgcgccgggtgacggcacaccc
atgtattaccgggtgaccggcaccgtggagctgcagagcggggcgctcagtctgaccggc
gcccgcgtgtccatcggcaacagtacaccgagtgtgagcaccaccagcggcgatgccaac
accggcgtttttgacctgagcgcgccctggcagatcagcttcaaggtggtgagtgtgggc
ggggataccagcaagtatttccagttatatgtggataacaacacgtcgtccagcagcaac
tccctgtggggaaccagttccaagttccaccagatctacctgagcgaactggtagcggga
caggcctacaccgtgccaggtctcaccgccagcagtaactcgttcattacgctcagaacc
gagagcggtgccaccgtggtggtggatgacctgctgatcgaagccgtaccctga
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