Mus pahari (shrew mouse): 110317633
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Entry
110317633 CDS
T05929
Symbol
Rbm39
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpah03041
]
110317633 (Rbm39)
Spliceosome [BR:
mpah03041
]
Common components
Common spliceosomal components
General mRNP proteins
110317633 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RRM_7
CDC45
Motif
Other DBs
NCBI-GeneID:
110317633
NCBI-ProteinID:
XP_021047857
Ensembl:
MGP_PahariEiJ_G0025999
LinkDB
All DBs
Position
3:complement(138527062..138558556)
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AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVRXLLDTPEEXXXXXVFCMQLAARIRPRDLEEFFSTVGKVRDV
RMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNL
QKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSE
CAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQL
SNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagccatgcttgaggccccttacaagaaggatgagaac
aagttgaacagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgtagtcatgagagaaaaagaagcaaaagtaaagaacggaaacgaagtagggat
agagaaaggaaaaagagcaaaagccgagagcggaaacgaagtagaagcaaagaaaggaga
cgaagccgctcacgcagtcgggatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacgttcccgaagcaaaagtccattcaggaaagacaagagtcctgtgaggtaa
ctgttagacactccagaagagnnnnnnnnnnnnnnngttttctgcatgcaactggcagca
agaattcgaccgagagatttggaagagtttttctctacagttggaaaggttcgagatgtg
agaatgatttctgatagaaattcaagacgttccaaaggaattgcctatgtggaatttgtt
gatgtcagttcagtgcctctagcaattggattaactggccaacgagttttaggagtgcca
atcatagttcaggcatcacaggcagaaaaaaacagagctgctgcaatggcaaacaattta
caaaagggaagtgctggacctatgaggctctatgtaggctcattacactttaacataact
gaagatatgcttcgggggatctttgaaccttttggaaggattgaaagtattcagctcatg
atggatagtgagactggacggtccaagggatatgggtttattacattttctgactcagaa
tgtgccaaaaaggctttggaacagcttaatggatttgagttagctgggagaccaatgaaa
gttggtcatgttactgaacgaactgatgcttctagtgctagttcatttttggacagtgat
gaactagaaaggactggaattgacttgggaacaactggacgtcttcagttaatggcaaga
cttgcagagggtaccggtttgcagattccacctgccgcacaacaggctttacaaatgagt
ggctctttggcatttggtgctgtggcagatttgcaaacacgactttcacaacagaccgaa
gcctcagctttagctgcagctgcgtctgttcaacctcttgcaacacagtgtttccaactt
tctaacatgtttaatcctcaaacagaagaagaagttggatgggacacagagattaaagat
gatgtcattgaagaatgtaataaacatggaggagtcattcatatttatgttgacaaaaat
tcagctcagggcaatgtgtatgtaaagtgcccatctattgctgcggctattgctgctgtc
aatgcattgcatggcagatggtttgctggtaaaatgataacagcagcctatgtacctctt
ccaacttaccacaacctctttcctgattctatgacagcaacacaactactggttccaagt
agacgatga
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