KEGG   Mus pahari (shrew mouse): 110317845
Entry
110317845         CDS       T05929                                 
Symbol
Cdk9
Name
(RefSeq) cyclin-dependent kinase 9
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03250  Viral life cycle - HIV-1
mpah05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110317845 (Cdk9)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    110317845 (Cdk9)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:mpah01001]
    110317845 (Cdk9)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpah03021]
    110317845 (Cdk9)
Enzymes [BR:mpah01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     110317845 (Cdk9)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     110317845 (Cdk9)
Protein kinases [BR:mpah01001]
 Serine/threonine kinases: CMGC group
  CDK family
   110317845 (Cdk9)
Transcription machinery [BR:mpah03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     110317845 (Cdk9)
    Brd4/P-TEFb complex
     110317845 (Cdk9)
    7SK RNP complex
     110317845 (Cdk9)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1
Other DBs
NCBI-GeneID: 110317845
NCBI-ProteinID: XP_021048330
LinkDB
Position
3:complement(19975778..19981416)
AA seq 492 aa
MQRDAPPRAPAPAPRLPAPPIGAANSAGGGGGGGGSGGGGGSSAAPAPPGLPGTTSPRGP
GGGRRPEEAGSAPRGRKWPWRRKWRGRGGAWSVAGPGAAGAAAGGGGGGSGGGGGALEAA
MAKQYDSVECPFCDEVTKYEKLAKIGQGTFGEVFKAKHRQTGQKVALKKVLMENEKEGFP
ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK
FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS
QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLAL
ISQLCGSITPEVWPNVDKYELFEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP
AQRIDSDDALNHDFFWSDPMPSDLKGMLSTHLTSMFEYLAPPRRKGSQITQQSTNQSRNP
ATTNQTEFERVF
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgcagcgggacgcaccgccgcgagccccagccccagcgccacggctccctgcgcccccg
atcggggccgccaacagcgctggcggcggcggcggaggcgggggcagtggcggcggcgga
ggctcctctgcagctccggctccccctggcctcccgggaactacaagtcccagggggcct
ggcggcgggcggagaccggaagaggcgggctcggcacctcgaggccggaagtggccttgg
aggcggaagtggcgcggccgcggaggggcctggagtgtggcgggaccgggagcggcggga
gctgcggctgggggcggcggcggcggcagcggcggcggcggaggcgcgctggaggcggcc
atggccaagcagtacgactcggtggaatgcccgttctgcgatgaggtcaccaagtacgag
aaacttgccaagatcggccaaggcacattcggggaggtctttaaggccaagcaccgtcag
acgggccagaaggtggctctgaagaaagtgttgatggagaacgagaaggaggggttcccc
atcacagccttgcgggaaatcaagattctacagcttctaaaacatgagaatgtggtgaac
ctaattgagatttgtcggaccaaagcctcaccgtataaccgctgcaagggcagcatctat
ctggtgtttgacttctgtgagcatgaccttgctgggctgctgagcaatgtcttagtcaag
ttcacattgtctgagatcaagagagtgatgcaaatgctgctgaatggcctctactacatc
cacaggaacaagatcctgcacagggacatgaaggctgcgaatgtgctcattacccgcgac
ggggtcctgaagctggcagattttgggctggcccgtgccttcagcctagctaagaatagc
cagcccaaccgatacaccaaccgtgtggtgacattgtggtaccggcctccggagctgctg
ctcggagagcgggactacggcccgcccattgacctttggggtgctgggtgcatcatggca
gagatgtggactcgtagccctatcatgcagggtaacacagagcagcaccagctcgccctc
atcagccagctctgtggctccatcacgccagaggtgtggccaaatgtagacaagtatgag
ctgtttgaaaagttggaacttgtgaagggccagaagcggaaggtgaaggaccgtctgaag
gcctacgtgcgggacccctatgctctggacctcattgacaagctgctggtgctggaccca
gcgcagcggattgacagtgatgatgccctcaaccacgacttcttctggtcggaccccatg
ccctcggacctcaagggcatgctgtctactcacttgacgtctatgtttgagtacctggca
ccgccacggcggaagggcagccagatcacccagcagtccaccaaccagagcagaaatccc
gccaccaccaaccagacggaatttgaacgtgtcttctga

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