Mus pahari (shrew mouse): 110321336
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Entry
110321336 CDS
T05929
Symbol
Spta1
Name
(RefSeq) spectrin alpha chain, erythrocytic 1 isoform X1
KO
K27408
spectrin alpha, erythrocytic
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpah04812
]
110321336 (Spta1)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110321336 (Spta1)
Intermediate filaments
Intermediate filament-binding proteins
110321336 (Spta1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_7
SH3_2
EF-hand_6
EF-hand_1
SH3_3
SH3_10
Motif
Other DBs
NCBI-GeneID:
110321336
NCBI-ProteinID:
XP_021053208
Ensembl:
MGP_PahariEiJ_G0028167
LinkDB
All DBs
Position
5:146712581..146781133
Genome browser
AA seq
2415 aa
AA seq
DB search
METPKETAVESSGPKVLETAEEIQHRRQEVLNQYQRFKERVAERGQKLEDSYHYQVFRRD
ADDLEKWIMEKLEIAKDKTYEPTNIQGKYQKHESFVSEVQAKSRVLPELEEIREARFAED
HFAHEATKTHLKQLRQLWDLLLELTQEKSDVLLRALNFYQYSQECEDILEWVKEKEAIVT
LVELGDDWERTEILHKKFEEFQEELTARKGKVDRVNQYAHECAQEKHPKLPEIKAKQDEV
NAAWDRLWSLALQRRESLSNAADLQRFKRDVNEAIQWMEEKEPQLTSEDYGKDLVSSEAL
FHNHKRLERNLAVMDDKVKELCAKADKLMISHPADAPQIQQMKVDLVSNWERIRALATNR
YAKLKASYGYHRFLSDYDELSGWMKEKTALINADELPTDVASGEALLARHQQHKHEIDSY
DDRFQSADATGQELLDGNHEASEEIREKMTILANDWAALLELWDKCQHQYRQCLDFHLFY
RDSEQVDSWMSRQEAFLENEDLGNSVGSVEALLQKHDDFEEAFTAQEEKIITLDETATKL
IDNDHYDSENIAAIRDGLLARCDALRERAATRRKLLVDSQLLQQLYQDSDDLKTWINKKK
KLADDEDYKDVQNLKSRVQKQQDFEEELAVNEIMLNNLEKTGQEMIDNDHYASEAVAARL
NEVANLWKELMEATAQKGTQLYEANQLLQFENNAEDLKRWLEEVKWQVTSEDYGKGLADV
QNLLRKHGLLESDVTARQNQVDTLTEMAAHFEEIGHPDSGNIRARQESLLSSFEALKEPL
AIRKKKLIDLLKLQQICRDSEDEEAWIQETEPSAASTHLGKDLVAAKNLLNRHEVILADI
ASHEPRIQVITERGNKMVEEGHFAAEDIASRVESLNKNMESLHARAIRRENDLKANVQLQ
QYLADLHEAEAWIKEKEPIVDNKNYGADEEAAGALLKKHEAFLVDLNAFENSIKALRDQA
EVCQQQQAAPVDDAGREARVIALYDFEARSRREVSMKKNDVLTLLSSINKDWWKVEADDH
QGFVPAVYVRKLAPDELPGFPQHRREEPVNIPQLQQQVETLYHSLLDRAEERRRRLLQRY
NEFLLAYEAGDMLEWIQEKKTENTGVELDDVWELQKKFDEFQRDLKSNEPRLKDINKVAD
ELLFEELLTPEGAHIRQELNTRWNSLKRLADEQYQLLSSAHAVEMFHREADDVKEQIDKK
CRALNVADPGSDLLSVQALQRQHEVFERDIIPLGEKVTTLGETAERLCESHPDATEDLQK
QRTELNEAWDTLQGLTNDRKESLNEAHKFFLFLSKASDLENWIKTIGGVISSPELAEDLT
GTEILLERHQEHHDDIEREDPTFQALEDFGTELIDRGHRNSREIENTLQDINSKRDNLEK
SWENRKKMLDQCLELQLFRGKCEQVESWMVARENSLRSDDRDHLNSLQALMKKRDDLDKA
IAAQEGKIADLENVAIRLIDNDHYAKEEITARLQRVLDRWKALKEQLLTELGKLGDYADL
KQFYRDLEELEEWISEMLPIACDESYKDPSNIQRKYLKHQAFENEVNGRAEQVDGVINLG
NSLIERRVCDGDEENMQEQLDKLKENWDYLLERTTDKGQKLNEASRQQRFNTSIRDFEFW
LSEAEGLLAMKDQARDLTSAGNLLKKHQLLEAEMLAREDPLKDLNDLAQELISSGTFNID
QIEEKMNGVNERFENVQSLAAAHHEKLKEAYALFQFFQDLDDEEAWIEEKLLRVSSQDYG
RDLQSVQNLLKKHKRLEGELVAHEPAVQNVLDTAESLRDKAAIGKEEIQERLAQFVQHWE
KLKELAKTRGVHLEESLEYLQFMENAEEEEAWLGEKHALVSRGDSGDTLAATQSLLKKHE
ALENDFAVHKNRVQDVCAQGEDILSKEETQNKDKISTKIQVLNEKTASLAKALAAWKSQL
EDVHAFQQFNWKADVVESWIGEKEASLKTKSNGADLTTFLTLLAKHDTLDASLQSFQQER
LSEISELKDQLVAGEHSQAKAIEEQHAALLRHWEQLLEASRVHRQKLLEKQMPLQKAEEL
FMEFAHKASAFNNWCENAEEDLSEPVHCVSLNEIRQLQKEHEAFLASLVGAQEDFNHLLE
LDKQIKALNVPSSPYTWLTVDVLGRIWNHLPDIIKEREQELQKEEARQIKNFEMCQEFEQ
NASAFLQWIQETRAYFLDGSLLKETGTLESQLEANKRKQKEIQAMKRHLTKIEDLGDSME
EALILDIKYSTIGLAQQWDQLHQLGMRMQHNLEQQIQAKDTIGVSEETLKEFSTTYKHFD
ENLTGRLTHKEFRSCLRGLNYYLPMVEEGEPEPKFEKFLNAVDPGRKGYISLEDYTSFLI
DKESENIKTSDDIEIAFQALAEGKAYITKEDMKQALTPEQVSFCTIHMQQYMDPRGRSQP
AGYDYVGFTNSFFGN
NT seq
7248 nt
NT seq
+upstream
nt +downstream
nt
atggaaactccaaaggaaactgctgtcgaaagcagtggaccaaaggtccttgaaacagca
gaagaaatccagcaccgacgacaggaggtgttaaaccagtaccagaggttcaaggagcgc
gttgcagagagggggcagaagcttgaggactcttaccactaccaagttttcaggagagat
gcagatgacctggagaagtggatcatggaaaagcttgaaattgcaaaggataagacatat
gaacccacaaatatacaggggaaatatcagaagcacgaatccttcgtatcagaggtgcaa
gccaagtcaagagtgcttcctgagctggaagaaatcagggaagctcgatttgctgaagat
catttcgcccatgaagccaccaagacccatctgaaacaacttcgccagctgtgggatctg
ctcttggagttgacccaagagaaaagtgacgtgctgctgcgggcactgaatttctatcaa
tattctcaggagtgtgaagacattctggagtgggtcaaagagaaggaagctatagtgaca
ttagtggagctgggcgatgactgggagcgaactgagatcctgcataagaagtttgaagaa
ttccaggaagaactgactgctcggaagggaaaagtggacagagtgaaccaatatgctcat
gagtgtgcccaggagaaacatcctaaattacccgagataaaggcaaaacaggatgaagtc
aatgctgcctgggatcgtctctggagcctggctctccagagacgagaaagtctgtcgaat
gcagcagacctccagcgatttaaaagggatgtcaatgaagctatccagtggatggaggag
aaggagcctcaactcacttctgaggactatggcaaagatcttgttagttctgaggcactc
tttcacaaccacaagaggctcgagaggaatctcgctgtcatggatgacaaggtgaaggag
ttatgtgccaaagcagacaagctgatgatttcccatcctgcagatgcacctcagatccaa
cagatgaaagtggatctagtctccaactgggaacgcatccgtgccttggccactaacaga
tatgcaaagctgaaggcttcttatgggtaccatcggttcttatctgactatgatgagctc
tcaggctggatgaaggaaaagactgctctaatcaatgctgatgagctgccaacagatgtg
gccagtggggaagccctgctagccaggcaccagcagcataagcatgaaattgactcttat
gatgatcgctttcaatctgctgatgcaactggtcaagaactcctggatggcaatcacgaa
gcttctgaggaaattcgagagaagatgacaatacttgccaatgactgggctgccctgctg
gaactgtgggacaagtgtcagcaccagtaccgccagtgtctggatttccacctcttctac
cgagacagtgaacaagtggatagttggatgagcagacaagaggctttcctggaaaatgaa
gacctgggaaactcagtgggcagcgtggaagccctccttcagaagcatgacgactttgaa
gaagcattcactgcccaggaagaaaagatcataaccttggatgagactgcaaccaagctt
attgacaatgaccactatgactctgagaacatcgctgctatccgtgatgggcttttggcc
agatgtgatgccctgcgtgaaagggctgccactagaagaaaattgttggtagattcacaa
ctactccaacaactgtatcaagactcagatgacctaaaaacctggatcaataagaagaaa
aagctggctgatgatgaagattacaaggatgtacagaacttgaagagccgggttcagaag
cagcaggactttgaagaggaactggcagtaaatgagattatgctcaataacttggagaaa
actggccaagagatgattgacaatgatcactacgcctccgaggctgtggctgctcgcctg
aatgaggttgccaacctctggaaggagttgatggaggcaacagcacagaaagggactcag
ctgtatgaagctaaccagctgctacagtttgagaacaatgcagaagacctgaagcgctgg
ttagaagaggtgaagtggcaggttacctctgaggattatgggaaaggtctggctgatgtg
cagaatctactaagaaaacatggccttctagagtcagatgtgactgctcgtcagaatcag
gtggacactctcacggaaatggctgcacactttgaagaaataggccatcccgactctggg
aacatacgtgcaaggcaggaatccttgctctccagttttgaggctctgaaagagccactg
gccattcggaagaagaagctcattgatctcctgaagctacagcagatttgcagagactcg
gaagatgaggaggcctggatccaggagactgaaccctcggcagcttctactcatcttgga
aaggacttggttgcagccaagaaccttctaaacagacatgaggtcatcttggcagacatt
gccagtcatgaaccacggattcaagttataacagagaggggaaacaaaatggtggaggaa
ggacacttcgctgcagaagacatagcatctagggttgaaagcttgaacaaaaatatggag
tctctccatgctcgagctattagacgggagaatgatcttaaggccaatgtccagctccaa
cagtacctggcagatctgcatgaagcagaagcatggattaaagagaaagaacccattgta
gacaacaaaaactatggagctgatgaagaagcagctggggcccttctcaagaagcatgag
gccttcctggtggacctgaatgcatttgaaaacagcataaaggctctgagagatcaggca
gaagtctgccagcaacagcaggcagcgccagtggatgatgctggtcgagaagctagagtc
atagctttgtatgactttgaggctcgcagccgtagagaggtcagcatgaagaaaaatgat
gtcttaactctgctcagttccatcaacaaggactggtggaaggttgaagctgatgatcac
cagggttttgtgccagctgtatatgtcaggaaactggcccccgatgagctaccaggcttc
ccacagcataggcgagaggagccagtcaacatccctcagctccagcagcaggtcgagacc
ctgtaccactctctcctagaccgggcagaagagcgcagacgtcgcttgctgcagcgttac
aatgagtttctgctggcctatgaggcaggagacatgttggagtggatccaagagaaaaag
acagaaaacactggagtggaactggatgatgtttgggaactacagaagaagtttgatgag
ttccagagggatctgaagagtaatgaacctcgactaaaggacatcaataaagtggctgac
gaactgctctttgaagagctcctaaccccagaaggagctcacatacgacaggagttgaac
acccgctggaattccttgaagaggctggcagatgaacagtatcagctgctcagcagtgca
catgctgttgagatgtttcacagagaagcagatgatgtcaaggaacagattgataagaaa
tgccgggctctcaatgttgcagaccctggctctgacctgctcagtgtccaggccctccag
aggcagcatgaggtctttgagagagacatcatccccctgggagaaaaggtgactacgctg
ggggagactgccgagcgtctctgtgaatcacacccagatgccactgaggacctacagaag
cagagaacagagctgaatgaggcctgggacacactacaaggtcttacaaatgatcggaag
gagagtctgaatgaagcccataaattcttcctcttccttagcaaggccagtgatctagag
aattggatcaaaaccatcggtggtgtgatatcatcacctgagctggctgaggacttaact
ggcacagagatcttgctggagcgacaccaggagcatcatgatgacatagaaagagaggac
cccaccttccaggccttagaagactttggtacagaacttatagacagaggccaccgtaac
agccgtgaaattgaaaatactctccaggatattaattcaaagagagacaatttggaaaag
agttgggaaaaccgcaagaagatgctagaccagtgcttagaacttcagttattccgaggg
aagtgtgaacaggtcgagagctggatggtggcacgtgagaattccctgaggtcagacgac
agggatcatttaaacagtctgcaggctttgatgaagaaacgggatgatttggacaaagca
atcgctgcccaggaagggaagattgctgacctagagaacgttgccataaggctcatagac
aatgaccactatgccaaggaagagattactgctcgcctccaacgtgtgctagacaggtgg
aaggctctcaaagaacagctgcttactgaactgggaaagctaggcgactatgctgacctc
aaacagttctatcgtgacctcgaggagctggaggaatggatcagtgagatgcttcccata
gcctgtgatgaatcttacaaagatcccagtaatattcagaggaaatatctgaagcatcaa
gcctttgaaaatgaagtcaatggtcgcgctgagcaggtggatggggtcatcaaccttggg
aattccctgattgagcgcagagtgtgtgacggggatgaagagaacatgcaggagcaacta
gacaagctaaaggagaactgggattatctcctagagagaaccactgacaaaggacagaag
ctcaacgaggccagtcggcagcaaaggttcaacacaagcatccgggactttgagttctgg
ctttcagaggcagaaggcttgctggccatgaaggatcaggccagggacttaacttcagca
ggaaacctacttaagaagcatcaactattggaagcagagatgttggcacgagaggaccct
ctcaaagacctgaatgacctggctcaggagctgatttccagtgggactttcaacattgac
cagatagaagagaaaatgaatggtgtcaatgagcgctttgaaaatgtccagagcttggca
gctgcacaccatgagaagctgaaagaggcctatgccttgttccagttcttccaagacctc
gatgatgaggaagcctggatagaggagaagttgttacgagtgagctcccaggactatggg
agggatcttcagagtgttcagaacttattgaagaaacacaaacgcctagagggggagctg
gtggcacacgaacctgctgtccagaatgtgctggatacggcagaaagcctgagagacaag
gctgctatagggaaagaggagatccaggagcggctggctcagtttgtccaacactgggaa
aagctcaaagagttggcgaagacccgaggggtgcacttggaggagtctcttgagtatctg
cagttcatggagaatgcagaggaagaggaggcatggctgggggaaaagcatgctctggtc
agtcgcggggattctggagacacactggctgctactcagagtttgctaaagaagcatgaa
gctttggagaatgactttgctgtgcacaagaaccgggtacaagatgtttgtgcacaagga
gaagacattcttagtaaggaagaaactcagaacaaggataagatttcaaccaagatccaa
gttctgaatgaaaagacagcctctctggccaaggcattagctgcttggaagtcacaactg
gaagatgtgcatgcctttcagcagtttaactggaaggctgacgtggtggaatcctggata
ggggagaaggaagcaagcctgaagaccaagagcaacggtgcagacctcaccaccttcctc
acactcctggcaaagcacgacacactggatgccagtcttcagagcttccagcaggaaagg
ctttctgaaatctctgagctgaaggaccaactcgtggctggtgagcacagccaagccaaa
gccattgaggagcagcacgcagccttgctgaggcactgggaacaactgctggaggcatct
agagttcacaggcagaaactgctggagaagcagatgcctctacagaaggctgaggagcta
ttcatggaatttgcacacaaagcttcggccttcaacaactggtgtgagaacgctgaagag
gatttgtcagaacctgtacattgtgtctctctcaatgagatccggcagctgcagaaggaa
catgaagccttcttggcctctctggttggggctcaagaggatttcaaccatttgttggag
ctagacaagcaaattaaagccttaaatgtgccctccagtccttatacctggttaacagtg
gatgtgctgggcagaatctggaaccacctgcctgacatcatcaaggaaagggaacaggag
ctacagaaagaagaggctaggcagatcaagaacttcgaaatgtgccaggagtttgaacag
aatgccagtgccttccttcagtggatccaggagaccagggcctattttctggatggatcg
ttgctcaaggaaacaggaactctggaatcgcaacttgaagcaaataaaaggaaacagaag
gagatccaggcaatgaagcgccatctgaccaagattgaagacctgggggacagcatggaa
gaggctctgatccttgatatcaaatacagcaccattggactagcccagcagtgggatcag
ctgcaccagctggggatgcgaatgcaacacaatttggagcaacagattcaagccaaagac
accataggtgtgagtgaggagacactgaaagaatttagcaccacatacaaacacttcgat
gagaacttgacagggcgattgactcacaaagagttccgctcttgcctgagaggactcaat
tactatctgcctatggtagaggaaggtgaacctgagcccaagtttgagaaattcctgaat
gctgtggatccagggaggaaagggtatatctcactggaagactacacatcattcctgatt
gacaaggagtcagagaatatcaagaccagcgatgacatagagattgcattccaagccctg
gcagaaggcaaggcctatattaccaaggaggacatgaaacaggctctcactccggaacaa
gtgtcattctgtaccatacatatgcagcaatatatggacccacggggtcggagccaacct
gctggctacgactatgttggcttcaccaattcattctttggcaattga
DBGET
integrated database retrieval system
