Mus pahari (shrew mouse): 110330702
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Entry
110330702 CDS
T05929
Symbol
Rtn4
Name
(RefSeq) reticulon-4 isoform X1
KO
K20720
reticulon-4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05010
Alzheimer disease
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110330702 (Rtn4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110330702 (Rtn4)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110330702 (Rtn4)
Membrane trafficking [BR:
mpah04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
110330702 (Rtn4)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110330702 (Rtn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF639
Motif
Other DBs
NCBI-GeneID:
110330702
NCBI-ProteinID:
XP_021066634
Ensembl:
MGP_PahariEiJ_G0016729
LinkDB
All DBs
Position
13:complement(1198683..1248051)
Genome browser
AA seq
1167 aa
AA seq
DB search
MEDIDQSSLVSSSADSPPRPPPAFKYQFVTEPEDEEDEEDEEEEEEDDDEDLEELEVLER
KPAVGLSAAPVPPAAAPLLDFSSDSVPPAPRGPLPAAPPTAPERQPSWERSPAASAPSLP
PAAAVLPSKLPEDEEPPARPPPPAGASPLAEPAAPPSTPAAPKRRGSGSVDETLFALPAA
SEPVIPSSAENIMDLKEQPGNTVSSGQEDFPSVLFETAASLPSLSPLSTVSFKEHGYLGN
LSAVSSTEGTIEETLNEASRELPERATNPFVNRELAEFSLLEYSEMGSSFNGSPNGESAI
LVENTKKEIIVRSKDKEDLICSAALHNPQESSATLTKVVKEDRVMSPEKTMDIFNEMQMS
VVAPVREEYADFKPFEQAWEVKDTYEGSRDVLAARANMESKVDKKCFEDSLEQKSHGKDS
ENRNEDASFPSTPELVKDGSRAYITCDSFPPATESTAANIFPLLEDHTSENKTDEKKIEE
RKAQITTEKTSPKTSNPFLVAIHDSEADYVTTDNLSKVTEAVVANMPEGLTPDLVQEACE
SELNEATGTKIAYETKVDLVQTSEAIQESIYPTAQLCPSFEEAEATPSPVLPDIVMEAPL
NSLLPSTGASVAQPSVSPLEVPSPVSYDSIKLEPENPPPYEEAMSVALKTSEAKEEIKEP
ESFNAAVQETEAPYISIACDLIKETKLSAEPSPDFSNYSEIGKFEKSVPADSELVDDSSP
ESEPVDLFSDDSIPEVPQTQEEAVLLMKESLTEGAETATQHTHKERLSASSQEVGKPYLE
SFQPNLHITKDAASNEIPTLTKKETISLQMEEFNTAIYSNDDLLSSKEDKMKESETFSDS
SPIEIIDEFPTFVSAKDDSPKLAKEYTDLEVSNKSEVADVQSGADSLPCSELPCDLSFKN
IYPKDEVHVSDEFSKNRSSVSKVSLLLPNVSALEPQTEMGNIVKPKVLTKEAEEKLPSDT
EKEDRSLTAVLSAELNKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIAL
ALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAVSEELVQKYSNAALGHVNSTIKE
LRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSIPVIYERHQAQIDHY
LGLANKSVKDAMAKLQAKIPGLKRKAE
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggaagacatagaccagtcgtcgctggtctcctcgtccgcggacagcccgccccggccc
ccgcccgcattcaagtaccagttcgtgacggagcccgaggacgaggaggacgaggaagac
gaggaggaggaggaggaggacgacgacgaggacctggaggaattggaggtgttggagagg
aagcccgcagtcgggctgtccgcggctccggtgccgcccgccgccgcgccgctgctggac
ttcagcagcgactcggtgccccccgcgccccgcgggccgctgccggccgcgccccccacc
gcccctgagaggcaaccgtcctgggaacgcagccccgcggcgtccgcgccatctctgccg
cccgctgccgcagtcctgccctccaagctcccggaggacgaggagcctccagcgcggcct
ccgccgccagccggcgcgagccccctggcggagcccgccgcgcccccttccacgccggcc
gcgcccaagcgcaggggctcaggctctgtggatgagaccctttttgctcttcctgctgca
tctgagcctgtgataccctcctctgcagaaaatattatggatttgaaggagcagccaggt
aacactgtttcgtctggtcaagaggatttcccatctgtcctgtttgaaactgctgcctct
cttccttctctgtctcctctctcaactgtttcttttaaagagcacggataccttggtaac
ttatcagcagtgtcatccacagaaggaactattgaagaaactttaaatgaagcttctaga
gaattgccagagagggcaacaaatccatttgtaaatagagagttagcagagttttcacta
ttagaatactcagaaatggggtcatctttcaatggctccccaaacggagagtcagccatt
ttagtagaaaacactaagaaagaaataattgttaggagtaaagacaaagaggatttaatt
tgtagtgcagctcttcataatccacaagagtcatctgcgacccttactaaagtggttaaa
gaagacagagttatgtctccagaaaagacaatggacatttttaatgaaatgcaaatgtca
gtggtagcacctgtgagggaagagtatgcagactttaagccatttgaacaagcatgggaa
gtgaaagatacttatgagggaagtagggatgtgctggctgctagagctaatatggaaagt
aaagtggacaaaaaatgctttgaagatagcctggagcaaaaaagtcatgggaaggatagt
gaaaacaggaatgaggatgcttctttccccagtaccccagaacttgtgaaggacggctcc
agagcatacatcacctgtgattcctttcccccagcaaccgaaagcactgcagcaaacatt
ttccctctgttagaagatcacacttcagaaaataaaacagatgaaaaaaaaatagaagaa
aggaaggcccaaattacaacagagaagactagccccaaaacgtcaaatcctttccttgta
gcaatacacgattctgaggcagattatgtcacaacagataatttatcaaaggtgactgag
gcagtagtggcaaacatgcctgaaggtctaacgccagatttagttcaggaagcatgtgaa
agtgaactgaatgaagccacaggtacaaagattgcttatgaaacaaaagtggacttggtc
cagacatcagaagctatacaagagtcaatttaccccacagcacagctttgcccatcattt
gaggaagctgaagcaactccgtcaccagttttgcctgatattgttatggaagcaccatta
aattctctccttccaagcactggtgcttctgtagcacagcccagtgtatccccactagaa
gtaccgtctccagttagttatgacagtataaagcttgagcctgaaaatcccccaccatat
gaagaagccatgagtgtagcactaaaaacatcggaagcaaaggaagaaattaaagagcct
gaaagttttaatgcagctgttcaggaaacagaagctccttatatatccattgcatgtgat
ttaataaaagaaacaaagctctccgctgagccaagtccagatttctctaattattcagaa
ataggaaaatttgagaagtcggtgcctgctgactctgagctagtggatgactcctcaccc
gagtctgagccagttgacttatttagtgatgattcaattcctgaagtcccacagacacaa
gaggaggctgtgctgctcatgaaggagagtctcactgaaggggctgaaacagcaacacag
cacacacataaggagagacttagtgcttcatctcaggaggtaggaaagccatatttagag
tcttttcagcccaatttacatattacaaaagatgctgcatctaatgaaattccaacattg
accaaaaaggagacaatttctttgcaaatggaagagtttaatactgcaatttattccaat
gatgacttactttcttctaaggaagacaaaatgaaagaaagtgaaacattctcagattca
tctcccattgagataatagatgagtttcccacatttgtcagtgctaaagatgattctcct
aaattagccaaggagtacactgacctagaagtatccaacaaaagtgaagttgctgatgtc
cagagcggggccgattcgttgccttgctcagaattgccctgtgacctttctttcaagaat
atatatcctaaagatgaagtacatgtctcagatgaattctccaaaaataggtccagtgta
tctaaggtgtccttattgcttccaaatgtttctgctttggaacctcaaacagaaatgggc
aacatagttaaacccaaagtacttacaaaagaagcagaggaaaaacttccttctgataca
gagaaagaggacagatccctgacagctgtattatcagcagagctgaataaaacttcagtt
gttgacctcctctactggagagacattaagaagactggagtggtgtttggtgccagctta
ttcctgctgctgtccctgacagtgttcagcattgtgagtgtaacggcctacattgccttg
gccctgctgtctgtgactatcagctttaggatatataagggtgtgatccaagctatccag
aaatcagatgaaggccacccattcagggcatatttggaatctgaagttgctgtatcagag
gaattggttcagaaatatagtaatgctgctcttggtcatgtgaacagcacaataaaagaa
ctgaggcgtctcttcctagttgatgatttagttgattccctgaagtttgcagtgttgatg
tgggtgtttacttacgttggtgccttgttcaatggtttgacactactgattttagctctg
atctcactcttcagtattcctgttatatatgaacggcatcaggcacagatagatcattat
ctaggacttgcaaacaagagcgttaaggatgccatggccaaactccaagcaaaaattcct
ggattgaagcgcaaagcagaatga
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