Mus pahari (shrew mouse): 110332091
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Entry
110332091 CDS
T05929
Symbol
Cltc
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04142
Lysosome
mpah04144
Endocytosis
mpah04721
Synaptic vesicle cycle
mpah04961
Endocrine and other factor-regulated calcium reabsorption
mpah05016
Huntington disease
mpah05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110332091 (Cltc)
04142 Lysosome
110332091 (Cltc)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
110332091 (Cltc)
09156 Nervous system
04721 Synaptic vesicle cycle
110332091 (Cltc)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
110332091 (Cltc)
09164 Neurodegenerative disease
05016 Huntington disease
110332091 (Cltc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110332091 (Cltc)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpah04147
]
110332091 (Cltc)
Membrane trafficking [BR:
mpah04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
110332091 (Cltc)
Exosome [BR:
mpah04147
]
Exosomal proteins
Proteins found in most exosomes
110332091 (Cltc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
110332091
NCBI-ProteinID:
XP_021068732
Ensembl:
MGP_PahariEiJ_G0018049
LinkDB
All DBs
Position
14:complement(54352888..54415945)
Genome browser
AA seq
1679 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKDMYQEAKLTDQLPLII
VCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVV
RGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRE
NPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELW
GSVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNS
VFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFD
VNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSS
YMEVVQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNA
HIQQVGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEV
CFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGM
FTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAII
TMMNHPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLMVLSPRLDHTRAV
NYFSKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLA
QRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASESKDTELAEELLQW
FLQEEKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDKLDAS
ESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGYSM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattctgcccattcgctttcaggagcatctccagctccagaacctgggtatc
aacccagcaaacattggcttcagtaccttgactatggagtcagacaaattcatctgcatt
agagaaaaagtgggagagcaggctcaggtggtaatcattgatatgaatgatccaagtaat
ccaattcgaagaccaatctcagcagacagtgccatcatgaatcctgccagcaaagtgatt
gcactgaaagctggaaaaactcttcagatatttaacattgaaatgaaaagtaaaatgaag
gcccataccatgactgatgatgtcaccttctggaaatggatctctttgaatacggttgct
cttgttacggataatgcggtttatcactggagtatggaaggagagtctcagccagtgaaa
atgtttgatcgtcattctagcctcgcaggatgccagatcatcaattaccgtacagatgca
aagcagaagtggttgcttctgactggcatatctgcacagcaaaatcgtgtggttggagct
atgcagctgtattctgtagataggaaagtttctcagcctattgaagggcatgcagctagt
tttgcacaatttaagatggaaggaaatgcagaagaatcaacattattttgttttgctgtg
cggggtcaggcaggaggaaagttacatatcattgaagttggtacaccacccacaggaaat
caaccctttccaaagaaggccgtggatgttttctttcctccagaagcacaaaatgacttt
cctgttgcaatgcagatcagtgaaaagcatgatgtggtgttcctgatcaccaagtatggt
tatattcacctctatgatctggagactggcacatgcatctacatgaatagaatcagtgga
gaaaccatcttcgtgactgcacctcatgaagccacagctgggataataggagttaacaga
aagggacaagtcctgtcagtttgtgtggaagaggagaacataattccttacatcaccaat
gtcctacaaaatcctgacttggctctgagaatggctgtgcggaacaacttagctggtgct
gaagaactctttgcccggaaatttaatgctctcttcgcccagggaaactactcagaggct
gcaaaggtggctgctaatgcaccaaagggaatcctccgtactccagataccatccgtaga
ttccagagtgtcccagctcagccaggtcaaacttcacctctacttcagtattttggaatc
cttttggaccagggccagctgaacaaatacgagtccttagagttatgtagacctgtgctt
cagcaagggcggaaacagcttttagagaaatggctgaaagaagataagctggaatgttct
gaagaactgggtgatctcgtaaaatctgtggacccaacattagcactgagtgtttacctc
agggccaatgtacctaataaagtcatccagtgctttgcagagacaggccaagtccagaag
attgttttatatgctaaaaaagttggctatactccagattggatctttcttctgagaaat
gtcatgcggatcagtccagaccaaggacagcagtttgctcaaatgttagttcaggatgaa
gagcctcttgctgatatcacccagattgtggatgtctttatggaatacaatctaatccaa
caatgtactgccttcttacttgatgctttgaagaataatcgtccctctgaaggtcctttg
cagacgcgattgcttgagatgaaccttatgcacgcacctcaagttgcagatgccattctc
gggaatcagatgttcacccactatgaccgggctcatatcgcccagctgtgtgagaaggca
ggcctgctgcagcgtgcattagagcacttcaccgatttatacgatataaaacgtgcagtt
gttcatacccatcttcttaaccctgagtggttagtgaattactttgggtccttatcagtt
gaagattccctagagtgtctcagagccatgctgtctgctaatattcgtcaaaatctacag
atctgtgttcaggtggcttctaaatatcatgaacagctgtcaactcagtctctaattgaa
ctctttgaatcattcaagagttttgaaggtctcttttattttctggggtccattgttaac
tttagtcaagacccagatgtgcactttaaatatattcaggcagcttgcaagactgggcaa
atcaaagaagtggaaagaatctgcagagaaagcaactgctatgatcccgagcgagtcaag
aattttctcaaggacatgtatcaggaggcaaagctaacagatcagctgccacttatcatt
gtctgtgaccggtttgactttgtccatgacctggtgctgtatttatatagaaacaatctt
cagaagtatatagagatatatgtccagaaggtaaatccaagtcgacttcctgtggttatt
ggaggattgctggatgttgactgctctgaagatgtcattaaaaatttgattcttgttgtg
agaggtcaattctctactgacgagcttgttgctgaagttgagaaaagaaacagattgaag
ctgcttcttccttggcttgaggctagaattcatgagggctgtgaggagcctgctactcat
aatgcattagccaaaatatacatcgacagtaacaacaacccagagagatttcttcgtgaa
aacccttattatgacagtcgtgttgttgggaagtactgtgagaagagagacccacatctt
gcttgtgttgcttatgaacgtggccagtgtgatctggaactcatcaatgtttgtaatgag
aattccctcttcaaaagtctttctcgctacttagtccgtcgaaaggatccagaattgtgg
ggtagtgtactactagaaagcaatccatacagaagaccattaattgaccaggttgtacag
acagccttgtctgaaactcaggacccagaagaagtgtcagtaactgtcaaggctttcatg
acagcagatcttcctaatgaactcattgaactgctggagaaaattgttcttgataactct
gtcttcagtgaacacaggaatctgcaaaacctcctcatcctcactgccattaaggctgac
cgaacacgtgttatggagtatattaaccgtctggataattatgatgctccagatattgcc
aacattgccatcagcaatgagctgtttgaagaggcatttgctattttccggaagtttgat
gtcaatacttcagcagtgcaggtgttgattgaacatattggaaacctggatcgtgcatat
gagtttgctgaacgctgcaatgagcctgctgtttggagtcaacttgcaaaagctcagttg
cagaaaggaatggtgaaggaagccattgattcttacatcaaagcagatgatccttcatct
tacatggaagttgtccaggctgccaatgccagcggaaactgggaagaattggtgaagtat
ttgcagatggcacgcaagaaggctcgcgagtcctatgtggagacagaattgatatttgcg
ctggctaaaacaaaccgccttgcagaattagaagagttcataaatgggccaaataatgct
catattcagcaagttggtgaccgttgttatgatgaaaaaatgtatgatgctgctaagttg
ctgtacaataatgtttctaactttggacgcttggcgtctacccttgttcaccttggcgag
tatcaggccgcagttgatggtgctagaaaagctaatagtactcggacatggaaagaggtc
tgctttgcctgtgtagatgggaaagagtttcgccttgctcagatgtgtggactccatatt
gtggtgcatgcagatgaattagaggagcttatcaactactatcaggatcgtggatatttt
gaagaactcatcaccatgttggaggcagccttgggactggagcgagctcacatgggaatg
ttcacagagctagctattttatattctaaattcaagccacagaaaatgagggaacacttg
gagttgttctggtcaagagtgaatattcctaaggtgctgagagctgcagaacaagctcat
ctttgggcagagctggtgtttctgtatgacaagtatgaagagtatgataatgccatcatt
accatgatgaatcaccccaccgatgcatggaaggaagggcagttcaaagacatcatcacc
aaggtggctaatgtggaactgtactacaaagcaatccagttctacttagaattcaagcct
ttgttgttaaatgacttgctcatggtgctgtctccacggttggatcacactcgtgcagtc
aattatttcagcaaggtaaaacagctaccactggtgaaaccatatttacgctcagttcag
aaccacaacaacaaatctgtgaatgaatcactgaacaacctctttattactgaagaagat
taccaggctctgcgaacatcaatagatgcttatgacaactttgacaacatctcacttgct
cagcgtttagaaaaacatgaactcattgaattcagaagaattgctgcttatctcttcaaa
ggcaacaatcgctggaaacagagtgtagagctgtgcaagaaagacagcctttacaaggat
gcaatgcagtatgcctctgaatctaaagacacagaattggctgaagagctcctacagtgg
tttttgcaggaagaaaaaagagaatgctttggagcttgtctctttacctgttatgatctc
ttaaggccagatgtcgtcctggaaactgcatggagacacaatatcatggatttcgccatg
ccctatttcatccaggtcatgaaggaatatttgaccaaggtggataaattagatgcttcg
gagtcactgagaaaagaagaagaacaagctacagagacacagcccattgtttatggtcag
ccccagctgatgctaacagcaggacccagtgtggcagtccctccccaggcaccttttggt
tatggttatactgcaccaccatatgggcagccacagcctggctttgggtacagcatgtga
DBGET
integrated database retrieval system
