Mus pahari (shrew mouse): 110336419
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Entry
110336419 CDS
T05929
Symbol
Sh3rf1
Name
(RefSeq) E3 ubiquitin-protein ligase SH3RF1
KO
K12171
E3 ubiquitin-protein ligase SH3RF [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mpah01009
]
110336419 (Sh3rf1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110336419 (Sh3rf1)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110336419 (Sh3rf1)
Protein phosphatases and associated proteins [BR:
mpah01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110336419 (Sh3rf1)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110336419 (Sh3rf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SH3_9
SH3_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-RING_4
zf-RING_11
zf-Nse
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
110336419
NCBI-ProteinID:
XP_021074626
Ensembl:
MGP_PahariEiJ_G0021542
LinkDB
All DBs
Position
19:76299655..76466920
Genome browser
AA seq
900 aa
AA seq
DB search
MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGV
DELPSNILLVRLLDGIKQRPWKPGPGGGGGTTCTNALRAQGSTVVNCGSKDLQSSQCGQQ
PRVQAWSPPVRGIPQLPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYHGEVSGVH
GFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWAEG
MLADKIGIFPISYVEFNSAAKQLIEWDKPPVPGVDTAECPSATTTTAAAAAAQSSSASKH
PDTKKNTRKRHSFTSLTMANKSSQASQNRHSMEISPPVLISSSNPTAAARISELSGLSCS
APSQVHISTTGLIVTPPPSSPVTTGPAFTFPSDVPYQAALGSMNPPLPPPPLLAATVLAS
TPSGATAAVAAAAAAAAAAGMGPRPVMGSTDQIAHLRPQTRPSVYVAIYPYTPRKEDELE
LRKGEMFLVFERCQDGWYKGTSMHTSKIGVFPGNYVAPVTRAVTNASQAKVSMSTAGQAS
RGVTMVSPSTAGGPTQKPQGNGVAGNPGVVPTAVVSAAHIQTSPQAKVLLHMSGQMTVNQ
ARHAVRTVAAHSQERPTAAVTPIQVQNAACLGPASVGLPHHSLASQPLPPMAGPAAHGAA
VSISRTNAPMACAAGASLASPNMTTAALETEPSGRTVTILPGLPTSPESATSACGNSSAV
KPDKDSKKEKKGLLKLLSGASTKRKPRVSPPASPTLDVELGTGEAPLQGAVGPELPLGGG
HGRVGSCPTDGDGPVAAGTAALAQDAFHRKTSSLDSAVPIAPPPRQACSSLGPVMNEARP
VVCERHRVVVSYPPQSEAELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVENI
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgccttgttggaccttctggagtgccctgtgtgtctagaacgcctggat
gcttccgcaaaggtcttaccctgccagcatacgttttgcaaacgctgtttgctggggatt
gtgggttcccggaacgaactcagatgtcccgaatgccgaactcttgttggctctggggtc
gacgagctccccagtaacatcctactggtcagacttctggatggcatcaagcagaggcct
tggaaacccggccctggtgggggcggcgggaccacctgcacaaacgcattaagggcgcag
ggcagcactgtggttaattgtggctcgaaagatctgcagagctcccagtgtggacagcag
cctcgggtgcaagcctggagtcccccagtgaggggaatacctcagttaccgtgtgccaaa
gcattatataactacgaaggaaaagagcctggagaccttaagttcagcaaaggggacatc
atcattctgcgccgacaagtggatgagaattggtaccatggggaagtcagcggggtccat
ggctttttccccaccaacttcgtgcagatcatcaaacctttacctcagcccccgcctcag
tgcaaagcactttacgactttgaagtgaaggacaaggaagctgacaaagattgccttccc
tttgcaaaggacgacgtactgaccgtgatccgcagagtggatgaaaactgggctgaagga
atgctggcagataaaataggaatatttccaatttcctatgtggagtttaactccgctgcc
aagcagctgatagagtgggataagcctcccgtgccaggagtggacaccgcagaatgcccc
tcagcaacgactacgacggcggcggcggcggcggcgcagagcagctctgcctcaaagcac
cccgacaccaagaagaacaccaggaagcgacactccttcacctccctcaccatggccaac
aagtcttcccaggcttcccagaaccgccactccatggagatcagccctcctgtgctcatc
agttccagcaaccccacagccgcagcccgcatcagcgaactgtccgggctctcctgcagc
gccccgtctcaggtccacataagcaccactgggttaattgtgaccccaccccctagcagc
cccgtgacaactggccctgcgttcacattcccgtcagatgtcccctaccaagctgccctt
ggaagtatgaatcctcctctacccccacctcctctcctggcggccactgtactcgcctcc
accccgtcaggcgctactgctgctgttgctgctgctgctgctgccgccgccgccgctgga
atgggacccaggcctgtgatggggtccactgaccagattgcacatttacggcctcagact
cgccccagtgtatatgttgctatatatccatacactccccggaaggaagatgaactggag
ctgaggaaaggggagatgtttttggtgtttgagcgttgccaggacggctggtataaaggg
acatcgatgcacaccagcaagataggtgttttccctggcaactatgtggcgcccgtcaca
agggcagtgacgaatgcctcccaagctaaagtctctatgtctactgcgggtcaggcaagt
cgcggggtgaccatggtcagtccttccactgcgggaggacctacgcagaagccccaagga
aacggcgtggccggcaatcctggcgttgtccccacggctgtggtatcagcagctcatatc
cagacaagtcctcaggctaaggtcctgctgcacatgtccgggcagatgacagtcaaccag
gcccgccacgctgtgaggacagttgcagcacatagccaggaacgccccacagcagcagtg
actcccatccaggtccagaatgccgcctgccttggtcctgcatccgtgggcctgccccat
cattctctggcctcccaacctctgcctccaatggcaggccctgctgcccacggtgctgcc
gtcagcatcagtcgaaccaatgcccccatggcctgcgctgcaggggcttctctggcctcc
cctaatatgaccactgccgcgttggagaccgagcccagtggtagaacagtgaccatcctc
cctggactccccacctctccagagagtgctacatcagcgtgtgggaacagttcagctgtg
aaaccagacaaggacagtaagaaagaaaaaaaaggcctactgaagctgctttctggtgcc
tccaccaaacgcaagccccgagtctcccctccagcatcacctaccctggatgtggagctg
ggtacaggggaggctcctttacaaggagcagtaggtcctgagctgccgctagggggcggc
cacggcagagtggggtcgtgccccacagatggcgatggtccagtggccgccgggacagca
gccctagctcaggacgccttccaccgcaagacaagctccctggactccgcagtgcccatc
gctcctccacctcgtcaggcctgctcctccctgggtcccgtcatgaatgaggcccggcct
gttgtttgtgaaaggcacagggtggttgtttcctaccctcctcagagtgaggcagaactt
gaactcaaagaaggagatatcgtgtttgtccataagaaacgagaggacggctggttcaaa
ggcacattacaaaggaatggaaagactggccttttcccagggagcttcgtggaaaacatc
tga
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