Mus pahari (shrew mouse): 110336528
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Entry
110336528 CDS
T05929
Symbol
U2af2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110336528 (U2af2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpah03041
]
110336528 (U2af2)
Spliceosome [BR:
mpah03041
]
Complex A
U2 snRNP components
U2 related factors
110336528 (U2af2)
Complex B
110336528 (U2af2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
110336528
NCBI-ProteinID:
XP_021074788
Ensembl:
MGP_PahariEiJ_G0021017
LinkDB
All DBs
Position
19:2002708..2020506
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AA seq
475 aa
AA seq
DB search
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSASRDRRR
RSKPLTRGAKEEHGGLIRSPRHEKKKKVRKYWDVPPPGFEHITPMQYKAMQAAGQIPATA
LLPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQ
APGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSE
NPSVYVPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSK
GYAFCEYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLVSLPSTINQTPVTLQV
PGLMSSQVQMGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECSKYGLVKSIEIPRP
VDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacttcgacgagttcgagcggcagctcaacgagaataaacaagaacgggacaag
gagaatcggcaccggaagcgaagtcacagtcgctctcgaagccgagatcgaaagcgtagg
agcaggagccgagatcggcgcaaccgggaccagcgcagtgcctctcgggataggagacga
cgaagcaaacctttgaccagaggcgctaaagaggagcacggtggattgattcgttccccc
cgccatgagaagaagaagaaggttcgtaaatactgggacgtgccaccgcctggctttgag
cacatcaccccaatgcagtacaaggccatgcaagctgcgggtcagattccagccactgcc
cttctcccgaccatgactcctgatggtctggctgtgaccccaacgccagtgcctgtggtt
gggagccagatgaccagacaggccagacgtctctacgtgggcaacatcccttttggcatt
actgaggaggctatgatggacttcttcaacgcccagatgcgcttgggggggttgactcag
gcccctggcaacccagtcttggctgtgcagataaatcaagacaagaattttgcctttttg
gagttccggtcagtggatgagacgacccaggccatggcctttgatggcatcatcttccag
ggccagtcattgaagattcgaaggcctcatgactatcagccactgcctggcatgtcagag
aacccctctgtttatgtgcctggagttgtatccactgtagtcccagactctgcccacaag
ctgttcatcgggggtttgcccaactacctaaatgatgaccaggtaaaagagctactgaca
tcctttgggcctctcaaggccttcaacttggtcaaggatagtgccacagggctctccaag
ggctatgccttctgtgagtacgtggacatcaacgtcacagatcaggccattgcggggctg
aatgggatgcagctaggggacaagaagctgcttgtccagagggcgagtgtgggagccaag
aatgccacgctggtgagcctcccgagcaccatcaatcagacacctgtgacccttcaagtg
cccggcctgatgagctctcaggtgcagatgggcggtcacccaactgaggtcctgtgcctc
atgaacatggtgctgcctgaggagctgctggatgatgaggagtatgaggagattgtagag
gatgtacgagacgagtgcagcaaatatgggttggtcaaatccatcgaaatccctcgcccc
gtggacggcgtcgaggtgcctggctgtggaaagatctttgtggagttcacctctgtgttt
gactgccagaaagccatgcagggtttaaccggtcgcaagttcgccaacagagtggtggtc
acaaaatactgtgaccctgactcttaccaccgtcgggacttctggtag
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