Mus pahari (shrew mouse): 110337116 Help Entry 110337116         CDS       T05929                                  Symbol Col4a1 Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism mpah  Mus pahari (shrew mouse) Pathway mpah04151   PI3K-Akt signaling pathway mpah04510   Focal adhesion mpah04512   ECM-receptor interaction mpah04820   Cytoskeleton in muscle cells mpah04926   Relaxin signaling pathway mpah04933   AGE-RAGE signaling pathway in diabetic complications mpah04974   Protein digestion and absorption mpah05146   Amoebiasis mpah05165   Human papillomavirus infection mpah05200   Pathways in cancer mpah05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:mpah00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     110337116 (Col4a1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110337116 (Col4a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110337116 (Col4a1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110337116 (Col4a1)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     110337116 (Col4a1)   09154 Digestive system    04974 Protein digestion and absorption     110337116 (Col4a1)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     110337116 (Col4a1)   09162 Cancer: specific types    05222 Small cell lung cancer     110337116 (Col4a1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     110337116 (Col4a1)   09174 Infectious disease: parasitic    05146 Amoebiasis     110337116 (Col4a1)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     110337116 (Col4a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:mpah04147]     110337116 (Col4a1)    00536 Glycosaminoglycan binding proteins [BR:mpah00536]     110337116 (Col4a1) Exosome [BR:mpah04147]  Exosomal proteins   Exosomal proteins of other cancer cells    110337116 (Col4a1) Glycosaminoglycan binding proteins [BR:mpah00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110337116 (Col4a1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  110337116 NCBI-ProteinID:  XP_021075532 Ensembl:  MGP_PahariEiJ_G0021275 LinkDB All DBs Position 19:complement(29695494..29809111) Genome browser AA seq 1669 aa AA seqDB search MGPRLSVWLLLLLAALLLHEERSRAAAKGDCGGSGCGKCDCHGVKGQKGERGFPGLQGVI GFPGMQGPEGPHGPPGQKGDAGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPGPP GIPGCNGTKGERGPLGPPGLPGFSGNPGPPGLPGMKGDPGEILGHIPGTLLKGERGFPGI PGMPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGSSFQGPKGDKGEQGVSGPP GVPGQAQVKEKGDFAPTGEKGQKGEPGFPGTSGYGEKGEPGKQGPRGKPGKDGEKGEKGS PGFPGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGTRPLGEKGDRGYPGAPGLRGEPGP KGFPGTPGQPGPPGFPTPGQPGAPGFPGERGEKGDQGFPGVSLPGPSGRDGAPGPPGPPG PPGQPGHTNGIVECQPGPPGDQGPPGTPGQPGLTGEVGQKGQKGEGCLACDTEGLRGPPG PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGSPGLIGQPGAKGEPGEIFFDMRLK GDKGDPGFPGQPGMPGRAGTPGRDGHPGLPGPKGSPGSIGLKGERGPPGGVGFPGSRGDI GPPGPPGVGPIGPVGEKGQAGFPGGPGSPGLPGPKGEAGKVVPLPGPPGAAGLPGSPGFP GPQGDRGFPGTPGRPGIPGEKGAVGQPGIGFPGLPGPKGVDGLPGEIGRPGNPGRPGFNG LPGNPGPQGQKGEPGIGLPGLKGQPGLPGIPGTPGEKGSIGGPGVPGEQGLTGPPGLQGI RGDPGPPGVQGPAGPPGVPGIGPPGAMGPPGGQGPPGSSGPPGIKGEKGFPGFPGLDMPG PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGSKGEMGVMGTPGQPGSPGPAGTPG LPGEKGDHGLPGSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIG PTGDKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGISGTPGSPGLPGPKGSVGGMGLPG LPGEKGVPGIPGSQGVPGSPGEKGAKGEKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPGE KGEKGSAGTPGMPGSPGPRGSPGNIGHPGSPGLPGEKGDKGLPGLDGVPGVKGEAGLPGT PGPTGPAGQKGEPGSDGIPGSAGEKGEQGVPGRGFPGFPGSKGDKGSKGEVGFPGLAGSP GIPGVKGEQGFMGPPGPQGQPGLPGTPGHPVEGPKGDRGPQGQPGLPGHPGPMGPPGFPG INGPKGDKGNQGWPGAPGVPGPKGDPGYQGMPGIGGSPGITGSKGDMGLPGVPGFQGQKG LPGLQGVKGDQGDQGVPGPKGLQGPPGPPGPYDVIKGEPGLPGPEGPPGLKGLQGPPGPK GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP SVDHGFLVTRHSQTTDDPLCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPISGDNIRPFISRCAVCEAPAMVMAV HSQTIQIPQCPNGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT NT seq 5010 nt NT seq  +upstreamnt  +downstreamnt atggggccccggctcagcgtctggcttctgctgctgctcgccgcccttctgctccacgag gagcgcagccgagccgctgcgaagggtgattgtggtggctctggctgtggaaaatgtgat tgtcatggcgtgaagggacaaaagggagaaagaggtttcccagggttacaaggtgtcatt ggatttcctgggatgcaaggacctgaggggccacatggaccaccaggacaaaagggtgat gctggagaacctggacttcctggaacaaaagggacgaggggaccccctggagcagctggc taccctgggaatcccggacttcctggtattcctggccaagatggccctccaggcccccca ggtatcccaggatgcaacggtacaaagggagagagagggccgctcggtcctcccggcttg cctggattcagcgggaatcctggaccaccagggttaccaggaatgaagggagatcctggt gaaattctcggccacattcccggaacactgctgaaaggggagagaggatttcctggcatc cccgggatgccgggctcgccagggttgccaggactccagggacctgtgggtcctccggga tttactgggccaccgggtcctccaggccctcctggacctcctggagaaaaggggcagatg ggctccagcttccaaggaccaaaaggtgacaagggagagcaaggggtcagtggtcccccg ggagttcctggacaggcacaagttaaggaaaaaggagactttgccccaacaggagaaaag ggtcagaaaggtgaacccggattcccgggaacatcaggatatggagagaagggtgaaccc ggcaagcaagggcctcggggaaaacctgggaaagacggtgaaaaaggagaaaaggggagc ccgggctttcctggtgattccgggtacccaggtctcccaggccgtcagggcccgcaggga gagaagggcgaagctggacttccaggcccccctggaactgtgataggtaccagacctttg ggagagaagggagatcgaggctacccaggagcaccagggttgagaggagagcccggccct aaaggtttccctggaacaccaggccagccaggccctccaggtttcccgactccaggccag cctggtgctccaggtttcccaggcgaaagaggagaaaaaggtgaccaaggatttccaggc gtgtcattaccaggaccaagtggaagagatggagccccggggcctcctggccctcctggt ccccctgggcagccaggccacacaaatggcattgtggagtgtcaacctggaccacccggg gaccagggtcctcctgggactccaggacagccaggtttgacaggcgaagttggacagaaa ggtcaaaaaggagagggctgccttgcctgcgacacagaaggacttcgtggacctccaggg ccacaagggcctccgggagagattggtttccctggacaacctggggctaaaggggaccga ggcctgcctggcagagatggtcttgaaggactgccgggtccacaaggttcaccggggctc ataggccagcctggagctaagggagagcctggagagatattttttgacatgcgactcaaa ggtgacaaaggagacccgggttttccaggacagcctggcatgccaggaagagcaggaact cccggaagagatggccacccaggactccctggacccaaaggctccccgggttcaatagga ttgaaaggagagcgaggtccccccggaggcgttggcttccctggtagtcgtggagacatc ggccctcctggacccccaggagttggtcccattggtcccgtgggtgaaaagggacaagca ggctttcctggaggccccgggtccccaggtcttccaggtccaaagggtgaagcaggaaag gttgtcccactccctggccccccaggagctgcaggacttccaggatcccctgggttccca gggccacaaggtgaccgaggcttcccaggaaccccaggacgtccaggcatcccgggagag aaaggtgctgtgggacagccaggaattggatttcccgggcttcctggtcccaaaggtgtt gacggcttacctggagagataggacggcctgggaatccaggtcgccctggatttaacggc ttacctggcaacccaggaccgcaaggtcaaaagggagaacctggcattgggcttccagga ctcaaagggcaaccaggccttccaggcattcccggtacacccggagaaaagggcagcatc gggggaccaggcgtcccaggagaacaggggttgactggcccccccggactccaggggatc agaggtgacccaggacctcctggagttcaaggccctgcaggtccaccaggggtcccagga atagggccacccggagctatgggccctcccggagggcaaggaccaccagggtcatcaggt ccccctggaattaaaggagagaaaggattccctggattcccaggactggatatgcctggc cccaaaggagataaaggctctcaaggacttcctggcctcacaggacagtcaggcctccct ggccttcctggacagcaggggacgcctggagttccagggttcccaggttctaaaggtgaa atgggcgtcatgggaaccccgggacagccaggctcgccgggaccagcaggcaccccagga ttacctggagaaaaaggggaccatggccttccgggctcctcaggacccaggggcgaccct ggcttcaaaggtgataaaggtgacgttgggcttcctggcatgccaggatccatggagcac gtggacatggggagcatgaagggacagaaaggagaccagggagagaaaggacaaattggg cccactggtgataaaggttcccgaggagaccctggaacaccaggagtacctgggaaagat gggcaggcagggcatcccggacagccagggcctaaaggtgacccaggcattagtggaaca ccaggatcccctggactccctggacccaaaggatcagttggaggaatgggcttgccaggt ttgcctggagaaaaaggcgtgcccggcatccctggctcacagggtgtccctggctcacct ggagagaagggagccaaaggagagaaagggcagtcaggtctacctggcattgggattccg ggacggcctggtgacaagggagaccagggcctcgcaggcttcccaggcagccccggtgag aagggagagaaaggcagtgccggaaccccagggatgccggggtccccaggcccgagaggt tctccggggaacatcggccatccaggaagcccaggcctgcccggagagaaaggggacaaa ggtctcccaggactggatggcgttcctggtgtcaaaggagaagcaggtctccctgggact cctggccccacaggcccagctggccagaagggagaacccggcagtgatggaatcccgggg tcggcaggagagaagggtgaacaaggtgttccaggaagaggcttcccaggtttcccaggc tccaaaggagacaaaggctccaagggtgaagtgggtttccctggcctagctggaagtcct ggaattcctggagtcaaaggcgagcaagggttcatgggtcctcccggccctcaaggacaa cccggcttacctggcactcctggtcaccccgtggaggggcccaaaggagaccgaggacct cagggtcaacctggtctgccagggcatccgggacctatggggccgccagggttcccagga atcaatgggccaaaaggcgacaagggaaatcaaggttggccaggagctcctggggttcca ggccctaagggggacccaggataccaaggcatgccgggcattggcggctctccagggatc acaggttcaaagggagatatgggactgcccggagttccaggattccaaggtcagaaaggt cttcctggtctgcagggagtgaagggagatcagggagatcaaggtgtacccggccctaaa ggtctccaaggtccccctgggccaccaggtccctacgatgtcatcaaaggagaaccaggg ctccctggtcctgagggtccccctggtcttaaaggactccaaggaccaccaggtccaaaa ggacagcaaggtgtgacaggctcagtgggcttgcctggacctccaggggtgcctgggttc gatggtgcccctggccagaaaggagagacaggaccctttggaccacctggtccaagaggg tttcctggtccaccaggccccgatgggctgccaggatccatgggtcccccaggtacccca tctgtggaccatggcttccttgtgaccaggcatagtcagacaacagatgacccactgtgt cccccagggaccaaaattctttaccatggatactctctgctctatgtccaaggcaacgag cgtgcccacgggcaggacttgggtacggctggcagctgcctgcgcaagttcagcacaatg cccttcctcttctgcaacatcaacaatgtctgcaacttcgcctccaggaatgactactcc tactggctgtccacaccagagcccatgcccatgtccatggcacccatctctggggacaac atccggcccttcattagcaggtgtgcggtttgtgaagcgccggccatggtgatggcggta cacagtcagaccattcagatcccgcagtgccccaatggttggtcctccctgtggatcggc tactccttcgtgatgcacaccagcgctggtgctgaaggttctggccaagccctcgcatcc cctgggtcctgcctggaagagtttagaagcgccccattcatcgagtgccacggcagagga acgtgcaattactacgcaaatgcttacagcttttggctcgccaccatagagagaagcgag atgttcaagaagcccacgccgtccaccttgaaggcaggggagctgcgcacgcacgtcagc cgctgccaagtgtgcatgagaagaacataa

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