Mannheimia pernigra 17CN0883: HV560_09195
Help
Entry
HV560_09195 CDS
T07233
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
mpeg
Mannheimia pernigra 17CN0883
Pathway
mpeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HV560_09195 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpeg03400
]
HV560_09195 (recB)
Enzymes [BR:
mpeg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
HV560_09195 (recB)
DNA repair and recombination proteins [BR:
mpeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HV560_09195 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
ResIII
PDDEXK_1
DEAD
AAA_11
Clathrin
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QLB42971
LinkDB
All DBs
Position
complement(1914422..1917946)
Genome browser
AA seq
1174 aa
AA seq
DB search
MQNLNPIELPLNQSVLIEASAGTGKTFTIANIYLRLLLGVGCMPLTVEQILVVTYTKAAT
EELKNRIRKNIQQCAEFLRDKVNGESIDGKPYANNLEFLVQLYSQMNDIHEALLRLSIAE
REIDIASVFTIHGFCQKMLVQFAFESGVRFDLDLQPNQRDLLKKLSEEVWREQFYPKGIT
ECEIISTELATPENALNAVRNYLASELPEPKAFLNQDFSEYLVKYKQFIDEVKKEWIKNG
KELATLIREDLAAKKSLHGNKYRANKFEDIVTEMNVWVNTASLVLPKEFHRLTENMIVAS
TKDKCEPINSPQLARNQAFLTAYKEQFENSLKAILLYQFLIGLKTKLADYKQSHPERGFD
DLLVMLNQALKNPQTGKALAQKIRSIYPFAMIDEFQDTDLIQYEIFSQIFMAEQSDNGFI
MIGDPKQSIYKFRGADIFTYLRAAKQADEQFTLGKNWRSLPEVVQAVNNLFHFANSEKSP
FLYEDIGFYPVQADSRKGKLISEQGHFVCYTSDKTNQDDVAEICAYQIHQQLNAMRAGKL
GIEKSGEFNPFEPKDIAILVRKGSEAKRIKKALTRRNIKSVYLAESASVFASEIASELCW
LLQAGLNPYHYKALLSALGSTLWGLSAAEIYRYKENEMLWDLKVNQFVEYSRIWKEQGIL
PMLHKIYLEQGIIERLKGLANADRLITDLLHLTEILQEMSQAFESEAELVRWYEKQISSP
DFNDEQPLRLESEEELIKIVTIHGSKGLQYPIVWLPFAAEKSENDTKANLGLYRNAQGEL
DWYLGEEEVKAQIQNEAYAEDLRLFYVALTRAESQINLVLPKMISLWSPLHYLLAEGQLP
KDKVSVAGYFEQKQISAKIVEVAEHLPFSRWESDKTEEDYQAKTFSGNIRVVGQITSFTS
LYAQHERFSEGKADRVVDLAQDRDVHIETIEPDYAIETDAFSPYQFPHGIRVGTVLHSFF
EHCRFGEQIDKERVAKVCEQLGLSEEWREPTLLWFDRIFSTPLAEANFCLKEIDETKRLN
EWQFYLRLKNNKALHQLNALLKQYSPLAKTLPELQLPQLEGFVRGFVDCIVQINGKFYLI
DYKSNFLGYLPQNYSTESIQREMGRQRYDLQYLLYTLAIHRYLLSRLGESYDYDRDFGGV
AYLFLRAMNGESGNGVYFDKPNKKLIEEMDLLFG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacttaaatcctattgaattaccacttaatcaatctgtgctaattgaagcctct
gcaggcacgggcaaaactttcactattgcgaatatctatctgcgtttattgttgggcgtg
gggtgtatgccacttacggttgagcagattttagtcgtcacttatacgaaagcggcaacg
gaagagctgaaaaaccgtattcgcaaaaatattcagcaatgtgccgaatttttaagagat
aaagttaatggggaaagtattgacggtaagccttatgccaataatcttgaatttttagtt
caactttattcgcaaatgaatgatattcacgaggcattattgcgtttaagcattgctgaa
cgagaaattgatattgctagcgtgttcaccattcacgggttttgtcaaaaaatgttagtg
caatttgcgtttgaatctggcgtaaggtttgatttagatttacagccaaatcaacgggat
ttacttaaaaaattaagcgaagaggtgtggcgagagcaattttatccgaaagggataaca
gaatgtgaaattatttcgactgaattagctacaccagaaaatgcgttaaatgccgtgaga
aactatttggcaagcgaattgccagagccgaaagcgtttttaaatcaggatttttctgaa
tatttagtaaaatataagcaatttattgatgaagttaagaaagaatggataaaaaatggt
aaagaattagctactttaattcgagaggatttagctgcgaagaaatctttacacggcaat
aaatatcgagcaaataagtttgaagatattgttaccgaaatgaacgtttgggtaaatact
gcctcattagtattgccgaaagaatttcaccgattaacggaaaatatgatagttgcttca
acaaaagacaagtgcgaaccgataaattctccccaacttgcaagaaatcaggcatttttg
accgcttacaaagagcagtttgaaaatagtttgaaagcgattttgctctatcaattttta
ataggcttaaaaacgaagctggcagactataagcaatcacacccagagcgtggttttgat
gatttgttggtaatgttaaatcaagctttgaaaaatccgcaaacgggtaaagcattagca
caaaaaattcgatctatttatccttttgcaatgattgatgagtttcaagataccgatctt
atccaatatgaaattttcagccaaatttttatggcagagcagagcgataacggttttatt
atgattggcgatccgaagcagtctatttataaattccgtggggcagatatttttacttat
ttgagagcagcgaagcaggctgatgagcaatttactttaggtaaaaactggcgttctttg
cccgaggtggtgcaagcggtcaataatttgtttcattttgcaaatagcgagaaatctccg
tttctttatgaggacatcggtttttatcctgttcaagcagatagtcgcaaaggtaaatta
ataagcgaacaggggcattttgtttgttataccagtgataaaactaatcaagatgatgtg
gcggaaatttgtgcgtatcaaattcatcaacagcttaatgcaatgcgtgcgggcaaattg
ggtattgaaaaaagcggtgaatttaacccctttgagccaaaagatattgcgattttagtg
agaaaaggctcagaggcaaaacggattaaaaaagccttgactagacgaaatatcaaatcg
gtttatttagcagaatctgctagcgtgtttgcttcagaaattgcctctgagctctgttgg
cttttacaagcagggctgaatccatatcactacaaagccttattgtcagccttaggctca
accctttgggggctaagtgcggcagagatttatcgctataaagaaaacgaaatgttgtgg
gatttaaaggtaaatcagttcgttgaatatagcagaatttggaaagagcaaggcatttta
ccgatgttgcataaaatctatttagagcaaggtattattgaacgcttgaaaggtttagcg
aatgcagatcgtttaattacggatttactgcatttaactgaaattttgcaagaaatgtcg
caagcattcgaatcagaggcggagctggtgcgttggtatgaaaaacaaattagctcgccc
gattttaatgatgaacagcctctgcgtttggaaagcgaggaagagttgatcaaaattgtg
actattcacggctcgaaaggcttgcagtatccgattgtttggctgccatttgcagcagaa
aaaagcgagaacgatactaaggcaaatttgggcttataccgcaatgcacaaggtgaattg
gattggtatttaggcgaagaagaggtaaaagcacaaatccaaaatgaagcttatgcggaa
gatcttcgtctgttttatgtggcactcacccgtgcagaatcgcagatcaatttagtgttg
ccaaaaatgatttcgctctggagcccattacattatttattggcagaggggcagttacca
aaagataaagtaagtgtggcgggctattttgagcaaaaacagatttcagccaagattgtc
gaagtcgcagagcatttaccttttagccgttgggaaagcgataaaacagaagaggattat
caagctaaaacctttagtggcaatattcgggtagtagggcagattacaagcttcacttca
ctttatgcacaacacgagcgttttagtgagggtaaagcagacagagtggtagatttagcc
caagacagagatgtgcatattgaaaccattgagccagattacgcgattgaaaccgatgcc
ttttcaccatatcaatttccgcacggtattcgagttggaacggtgttacacagctttttt
gagcattgccgatttggtgagcaaattgataaagaacgtgttgccaaagtgtgtgaacaa
ttaggtttaagcgaggaatggagagagccaacattgctttggtttgatcgtattttttct
acccctttggcagaggcaaatttttgtttaaaagagattgatgaaactaaacggttaaac
gaatggcaattctatttacgtttaaaaaataataaagccttacaccaattgaatgcgtta
ttaaagcaatatagtccattagcgaaaacattgccagagttacagctgccacaattagaa
gggttcgtacgtggttttgttgattgcattgtgcagataaatggaaaattctatttaatt
gactataaatccaacttcttaggctatttaccacaaaattattctacagaaagcattcaa
agagaaatggggagacagcgttatgatttacaatatttgctttatacccttgcaatacac
cgctatttactctctcgtttaggcgaatcttacgattatgatcgagattttggtggtgta
gcttatctatttttacgtgcaatgaatggcgaaagcggtaatggtgtctattttgataaa
ccaaataaaaaattgattgaagaaatggacttgttatttgggtag
DBGET
integrated database retrieval system
