Microlunatus phosphovorus: MLP_31940
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Entry
MLP_31940 CDS
T01535
Name
(GenBank) hypothetical protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mph
Microlunatus phosphovorus
Pathway
mph03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mph00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MLP_31940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mph03400
]
MLP_31940
Enzymes [BR:
mph01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MLP_31940
DNA repair and recombination proteins [BR:
mph03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MLP_31940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
Strep_his_triad
Motif
Other DBs
NCBI-ProteinID:
BAK36208
UniProt:
F5XLE2
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All DBs
Position
3429820..3430779
Genome browser
AA seq
319 aa
AA seq
DB search
MSSESIRVRVAGRELSVVNLDKVLYPAVGYTKAEVISYYSQLAEVLLPYLADRALTRVRF
PDGVAGPSFYEKNAPAGTPDWVRTERILTSDGPVDYVVADEPATIVWLANLAALELHAPQ
WRIATLDPSSRRQGALERGEPLADRIVIDLDPGEGMSIVETARAALIAAERLAADGMVPV
PQTSGSKGIQIYAAIAPTPSRQAWAYTKRLNVELHRRQPDFFVSTMSIAERAGRIYLDYN
QNLAARNTIAPYSLRGRQQPSVATPLTWDEVAGVTTADGLRFSPEDVLHRVAEHGDLAAD
LLHPDRPELPSAAEEPERL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggagagcatccgggtccgggtcgccgggcgggagctgtcggtggtgaacctg
gacaaggtcttgtatcccgccgtgggctacaccaaggccgaggtgatcagctactactcc
cagctggccgaggtgctgctgccctacctcgccgaccgggcgctcacccgggtccggttt
cccgacggggtagccggtccgagcttctatgagaagaacgctccggccggtaccccagac
tgggtgcgcaccgagcgcattctgaccagcgatggacccgtcgactacgtggtcgccgac
gagccggccaccatcgtctggctcgccaacctggctgcgctggagctgcacgccccgcag
tggcggatcgccaccctcgatccctccagccggcggcagggcgcgctggagcggggcgag
ccgctcgccgaccggatcgtcatcgatctcgatccaggcgaggggatgagcatcgtggag
acggcccgagccgcgttgatcgccgctgaacggctcgccgccgacggcatggtgccggtt
ccccagacctcaggcagcaagggcatccagatctatgcggcgatcgcaccgacgccgagt
cggcaggcgtgggcgtacacgaagcgactgaacgtcgaactgcaccgacgacaaccggac
ttcttcgtctccaccatgtcgatcgccgagcgcgcgggtcggatctatctggactacaac
cagaatctggcagcacgcaacaccatcgcgccgtactcattgcgtggccggcaacaaccc
agcgtcgccaccccgctgacctgggacgaagtcgccggcgtgaccaccgccgatgggcta
cggttcagccccgaggacgtactccaccgggtcgccgagcatggcgacctggcggccgac
ctgctccatcccgaccggcccgaactgccctccgccgccgaagaacccgagcgactttga
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