Monomorium pharaonis (pharaoh ant): 105834809
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Entry
105834809 CDS
T05760
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpha03000
]
105834809
Transcription factors [BR:
mpha03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
105834809
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
EMC3_TMCO1
Motif
Other DBs
NCBI-GeneID:
105834809
NCBI-ProteinID:
XP_012533026
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MDDVLKRLTCKMNSESLSIQDDTTNTRRTSPPLSSTPTGHNAHRLRMSSKRKSPPTKLSE
GGGGAGTVAGANEEEEDTTSPVAGSGGEAAVVVGEEGATTPVDIEECYSHQRGGECESSG
CSSPATTSEPDLRDSPSPSLNSLRTAKRQRLLFLSSQETLAPYHHPHHHHHHHHHHHHHT
NTSSSSGALEPASSSECGSPPTLLSVDPYYPHHPHHNNNNNTVTQNNNNNGSGTTAAGSK
RSMDDVLKRLTCKMNSESLSIQDDTTNTRRTSPPLSSTPTGHNAHSCSGNTTTTVANNVA
LSPPDAGKISNTEAQVEQDGVAALHRILCAESFVEKERRLSEMILQLQLLRERLVQQQDQ
SKSYPAHMTVDSQKQIEMQRLQTEHLKRQQEHIMQHNIQELQAQMTKSQLSMSGPQSLMF
LPFLEQLRGLPVQSPMPPPPATSTATTGNKHINSIANVHSPMISSHREGPSWAMTHLAQM
TTQMEKESSSPAPISSAVAPTAPPLQDLDAPLNLTKPKSTSSGATASSSSPGSDSHSTGA
GSSGQQEQPLAATAPKLFPPGLPIPRNYLPTLPYAGLPPHLSSLSSPMGKVMAKDEAGGP
GGSVAAAAVAAVEKHFAMHGLYGLPSNTGGMPSAQTQRPIKHSSSREEPPQEEQDFLSTP
HMWRDPGYKVAEDITEKAKMVRQQKRESENKPHIKRPMNAFMVWAKDERRKILKACPDMH
NSNISKILGARWKAMSNSEKQPYYEEQSRLSKLHMEKHPDYRYRPRPKRTCIVDGKKMRI
SEYKSLMRQRRQEMRQLWCRDGGSEMNFLSPVSADMTGTQHHPGTGAGPSARPSVSPPAT
MLNGGSGTAGPSSDHPSFYYPQDSLSPTDMMNFSPENSGSIGGYDASPRHHDED
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgttctcaaaagactaacgtgcaagatgaacagcgaatccctgtccatccag
gacgatactaccaataccaggcggacatcaccgccgctctcttccacgccaaccggtcac
aatgcacatagactgaggatgtcctcaaagaggaagtcgccaccaacgaagctatcggag
ggcgggggcggtgcgggtacagtggcaggcgccaacgaggaagaggaggacactacctcg
ccggtggccggttccggtggcgaggcggccgtcgttgtcggtgaggagggtgccaccacc
cccgtcgacatcgaggagtgctactcccatcagagaggcggcgagtgcgagtcgtccggc
tgttcgtcgccggcgactaccagcgagccggatctacgggactcgccgtcgccctcgttg
aattccttgcggacggccaagcgacagaggttgctgttcctgtcgagccaggagaccctc
gcaccgtaccaccatccccatcaccaccatcaccaccaccaccatcatcatcatcatacg
aacacgtcgtcgtcgtcgggtgccctggaaccggcgagctcctcggagtgcggctcgcca
cccaccctcctctccgtcgacccctattacccccatcatccccatcacaataacaacaac
aacaccgtcacgcagaataacaacaataacggcagtggtaccaccgctgctggcagtaaa
aggtccatggacgacgttctcaaaagactaacgtgcaagatgaacagcgaatccctgtcc
atccaggacgatactaccaataccaggcggacatcaccgccgctctcttccacgccaacc
ggtcacaatgcacatagttgcagtggaaacacaaccaccaccgtggcaaataacgtggca
ctttcacctccggatgctggaaagatatcaaacacggaggcgcaagtagagcaggacggc
gtggcggcccttcataggatcctctgcgccgagagtttcgttgagaaggagcgccgactg
tcggagatgatcctgcagctgcagctgctcagggagcgtttggtacaacagcaggatcag
tcgaagtcgtatcccgctcacatgacggtcgactcgcagaagcaaatcgagatgcagcgg
ctgcaaacggagcacttgaagcggcagcaagagcacatcatgcagcacaacatccaggag
ttgcaggctcagatgacaaagagccagctgagcatgtcggggccacagtcgttgatgttc
ctgccgtttctcgagcagctcagagggctgcccgtgcagtcgcccatgccaccgccgccg
gccacgtcaaccgccaccaccggcaacaaacacatcaactccattgccaatgtacatagc
ccgatgatcagcagccatcgggaaggtccaagctgggcgatgacgcatctcgcgcagatg
accacgcagatggagaaggaatcgtcgtcgccggcgccgatctcatccgcggtagcgccg
acggccccgcctcttcaggatctcgacgccccgttgaaccttaccaagccgaaatcgacg
tcctcgggcgccacggcgtcctcgtcgtcgcccggcagcgactcgcactcgaccggcgcc
ggaagtagcggccagcaggagcagccgttggcggcgaccgcgcccaagctcttccccccc
gggctgccgataccgcggaattacctgccgacgcttccctacgccggcctaccgccgcat
ctcagtagcctgtcttcgccgatgggcaaggtaatggccaaagacgaggccggcggacca
ggaggatccgtggcggccgctgcggtcgcggccgtggaaaagcacttcgcgatgcacggg
ctatacggattgccgtcgaacacaggtgggatgccgtcggcccagactcaaagaccgatc
aagcattctagctctcgggaagagccgccgcaggaggagcaggattttctctcgacgcct
catatgtggcgagatccaggatataaagtagcggaagacataacggaaaaagcgaaaatg
gtgaggcagcagaaaagggagagtgagaacaagccacatatcaagcgacctatgaacgca
ttcatggtgtgggccaaggacgaacgtagaaagatcttgaaagcctgcccagacatgcac
aactcgaacatatcgaaaattctcggcgctcggtggaaggcaatgtcgaattcggagaag
cagccgtattacgaggaacagtcgcggctctcgaagctgcatatggagaagcatccggac
tacaggtatcggccacggccgaagcgcacgtgcattgtggacggtaaaaaaatgcgcatc
tccgagtacaagtcgctgatgcggcagcggcggcaggagatgcggcagctgtggtgccgc
gacggcggcagcgagatgaacttcctgtcgccggtgagcgccgatatgaccggcacgcag
catcacccgggcacgggcgccggtccatcggcgcgaccatcggtatcaccgccggcgacg
atgttgaacggtggcagcggcactgccgggccgagctcggaccatccctcattctattac
ccgcaggacagcctctcgccgacggacatgatgaacttctcgcccgagaattccggctcg
atcggcggctacgatgcgagtccgcggcaccacgacgaggattga
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