Monomorium pharaonis (pharaoh ant): 105838609
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Entry
105838609 CDS
T05760
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
mpha
Monomorium pharaonis (pharaoh ant)
Pathway
mpha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105838609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpha03019
]
105838609
Messenger RNA biogenesis [BR:
mpha03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105838609
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
105838609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
FlgM
PulA_N1
Motif
Other DBs
NCBI-GeneID:
105838609
NCBI-ProteinID:
XP_012539749
LinkDB
All DBs
Position
Unknown
AA seq
688 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLDYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
KDEVTNWLANSIDALNLQMDTFESEIESLQAGKKKRIDKDKQDRVDELKAKLDKHRYHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQDPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSCTSPIPSPSLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNTQASIPTTGSTATIKSNMLSSSTPSKTIPMTPSHSSPSSTSNHIATTNAGNFAT
VAASHSNSQAIHSTSNKTSIHNSENNILSSSSTSSVTSSVPQTVAQQQHNNNPAPTQTTH
VLHSQQSQNHNSETEMTTPVPPSSSPQSSVSSRSSPMPANSCSPAPSTANGLIPKLPDGS
MSSLKSIAQQVIVRAGLEIPPSEPNRNIFDSAKTSNSSNSNATSEAHIPPLLGVAPLGPV
PLQKEHQLQFQMMEAAYYHMPHPSDSERLRSYLPRNTCTTPPYYQQVQLPHSDTVEFFQR
LSTETLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYI
YFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacaagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtgacggaa
ggtgtggaaacctttgaagatatttggcaaaaagttcacaatgccacgaacagtaatcag
aaggagaagtatgaggctgatctcaaaaaggaaatcaagaaacttcagaggttacgcgat
caaattaaaagctggatcgcgtcgggtgaaataaaagataagagcacacttcttgactac
cggaagttaattgaaactcaaatggaaagatttaaagttgtagaaagagagacgaaaaca
aaggcttattctaaagaaggtttaggcgctgcacaaaaattggacccagctcaaaaggag
aaggacgaagttactaattggctcgccaattctatagacgctctcaatctacagatggat
acatttgagtcagaaatagaatcgttacaagcaggaaagaagaaaaggatagacaaagat
aaacaggatagggtggacgaattaaaggcgaagctcgacaagcaccgctaccatatccgt
aaattggagacattattacgtatgcttgataatatgtctgtcgaggtcaacacaattaag
aggataaaggatgatgtcgagtattatatcgaatcttcgcaagatcctgatttcgaggaa
aacgaatatatttacgatgatattatcggcctcgatgaagtcgaattatctggtgttggc
atcccctcatcggcgacaacggatagcaacaacagcaatgaaaccggcggtaccccaacg
tcgactaattcctgcacttcgcccataccgtcgccgtcgttgagctccactatgcataat
cattcgagcgatagttctacagacaatgacaagaaaaccaagcctgtgaaaccaaccgca
gtcaggccgctactgaatacgcaagcgagcattccaaccacgggaagcactgccaccata
aaatcgaacatgctatcgagcagcactccaagcaaaaccattcccatgacacctagccat
agctcgcctagttctacgagcaatcacattgccacgactaacgccggcaatttcgccact
gtagctgcctcgcacagcaattcgcaagccatccattctacctcgaacaaaacatccatt
cacaacagcgaaaacaatatcttatcgtcatcgtctacgtccagcgttacgtcgagtgtg
ccgcaaacggtcgcgcaacaacaacacaataataatccagcgccgacacagacgacgcat
gtgttgcatagccagcagagtcagaatcacaacagcgaaaccgagatgactacgccggta
ccgccatcctcgtctccgcaatcgtcggtcagcagtagatcctcgccgatgcccgcaaac
tcctgctcgccagcaccgtccactgccaatggtctcatccctaagcttcccgatggaagc
atgtcctctctaaaatccattgcccaacaagtaattgtccgagcaggtcttgagatacca
ccttccgagccgaaccgaaacatctttgacagtgctaagacgagcaacagtagcaacagc
aacgccacgtcagaagcacacattcctccgctgcttggagtcgcgcccctgggacccgtg
ccgttacagaaggagcatcagctgcagttccaaatgatggaagccgcctactatcatatg
ccacatccgtctgactcggaaagattacgatcgtatctaccgagaaatacctgtaccact
ccaccttattatcagcaggttcagcttccccattcggatactgtggagttcttccaacgt
ctttctacagaaactttgttctttatattttattatatggaaggatctaaagggcagtat
ttggcagcaaaagctctgaagaaacaaagttggaggtttcatacgaaatatatgatgtgg
ttccagaggcatgaggaaccgaaagttattaacgaagaatacgagcagggaacatacatc
tattttgactacgaaaaatgggggcagaggaaaaaagaaggatttactttcgaatacaag
tacttagaggacagagacctgaactaa
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