Mycolicibacterium phlei: MPHLCCUG_00892
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Entry
MPHLCCUG_00892 CDS
T04305
Name
(GenBank) Putative DNA ligase-like protein
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
mphl
Mycolicibacterium phlei
Pathway
mphl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mphl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MPHLCCUG_00892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphl03400
]
MPHLCCUG_00892
Enzymes [BR:
mphl01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
MPHLCCUG_00892
DNA repair and recombination proteins [BR:
mphl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MPHLCCUG_00892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
Big_4
Thr_synth_N
Motif
Other DBs
NCBI-ProteinID:
AMO59723
LinkDB
All DBs
Position
867973..870240
Genome browser
AA seq
755 aa
AA seq
DB search
MKLTNPDKVLYPATGTTKGQVFDYYVGIAEAMIPHIAGRAVTRKRWPNGVEEASFFEKQL
ASSAPEWLDRASVTHRSGTTTYPLIDTAEGLAWIAQQAALEVHVPQWRFVGEGGERKPGP
ATRIVFDLDPGEGVTFRQLCEVAHEVRDLISDIGLTTYPLTSGSKGLHLYVPLEEPISSR
GASVLARRVAQQLEQTMPKQVTATMTRSLRTGKVFVDWSQNSAAKTTIAPYSLRGREHPT
VAAPRTWDEIADPKLRHLRFDEVLERVQEMGDLLAPLDETVPVPDRLTAYRSMRDAAKTP
EPVPVKPPKPGQDNRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPDTPSVNHLAVHT
EDHPLEYLTFHGEIPKGEYGGGRMIIWDTGTYEAEKFNDVPPDSKRQGGEVIITLHGSTI
DGRYALIQTDGKNWLAHRMKEQQRPHAGDIAPMLSTEGSVARLTSKQWAFEGKWDGYRMI
LDADHGTLRLRSRSGRDVTAEFPQFQAIAADLADHHVILDGEAVALDESGVPSFGEMQNR
ARSTRVEFWAFDILHLDDRPLLRAKYSDRRRILGALADGGGLIVPDRLPGDTGADALEYA
RTKRWEGVVAKKLDSTYQPGRRSKSWIKDKLWNTQEVVIGGWRRGEGGRSTGIGALMLGV
PVDGGLQFVGRVGTGFTDKELDKLKTTLEPLHTDESPFLDPLPRQDARGVTFVRPELVGE
VRYSERTSDNRLRQPSWRGLRPDKSPDEVRWEGMG
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgaccaacccggacaaggtgctgtacccggcgacgggcaccaccaagggccag
gtgttcgactactacgtcggcatcgccgaggcgatgatcccgcacatcgcgggccgcgcc
gtcacgcgcaagcgctggcccaacggtgtcgaggaggcgtcgttcttcgagaagcagctc
gcgtcgtcggcgccggagtggctggaccgcgcatcggtcacccaccggtccgggaccacg
acctacccgctgatcgacaccgccgagggactggcctggatcgcgcagcaggcggcgctg
gaagtgcatgtgccgcagtggcggttcgtcggcgagggcggggagcgcaaacccgggccg
gccacccgcatcgtgttcgacctcgaccccggcgagggcgtgaccttccggcagctgtgc
gaggtggcccacgaggtgcgcgacctgatcagcgacatcgggctgaccacctacccgctg
accagcggcagcaagggcctgcacctgtatgtcccgctggaggagccgatcagctcgcgg
ggtgcgtcggtgctggcgcgccgtgtcgcccagcagctcgaacagacgatgcccaaacag
gtcaccgcgacgatgaccaggagcctgcgcaccggcaaggtgttcgtcgactggagccag
aacagcgccgccaagaccaccatcgcgccgtattcgcttcgcggacgcgaacatccgacc
gtcgccgcgccccgcacgtgggacgagatcgccgatccgaagctgcgccacctgcgcttc
gacgaggtgctcgagcgggtgcaggagatgggcgacctgctggcgccgctggacgagacg
gtcccggtgcccgaccggttgaccgcctaccgcagcatgcgcgacgcggcgaaaacccct
gagcccgttccggtcaaacccccgaaaccggggcaggacaaccggttcgtcatccaggag
caccacgcccgccggctgcactacgacctgcgtctggaacgcgacggggtgctggtcagc
tgggcggtgccgaagaacctgcccgacaccccgtcggtgaaccacctcgccgtgcatacc
gaggaccatccgctggaatacctgaccttccacggcgagatccccaagggcgagtacggc
ggcggcaggatgatcatctgggacaccggcacctacgaggccgagaagttcaacgacgtc
ccgcccgacagcaagcgccagggcggcgaggtgatcatcaccctgcacggctcgacgatc
gacggccgctacgcgctgatccagaccgacggcaagaactggctggcgcaccggatgaag
gaacagcagcgcccgcacgccggcgacatcgcgccgatgctgtccaccgagggatcggtg
gcgcggctcaccagcaagcagtgggcgttcgagggcaagtgggacggctaccggatgatc
ctcgacgccgaccacggcacgctgcggctgcgctcgcgcagcggccgcgacgtcaccgcc
gagttcccccaattccaggccatcgcagccgatctcgccgaccatcacgtcatcctcgac
ggcgaggcggtcgcgctcgacgagtccggggtgccgagcttcggcgagatgcagaaccgc
gcccgctccacccgggtcgagttctgggcgttcgacatcctgcacctcgacgaccggccg
ctgttgcgcgccaagtactccgaccggcgcaggatcctcggggcgctggccgacggcggc
gggctgatcgtgccggaccgactgcccggcgacaccggtgccgacgcactcgagtacgcg
cgcacgaagcgctgggagggtgtggtcgccaagaagctcgactcgacgtatcagccgggg
cgacggtcgaagtcgtggatcaaggacaagctgtggaacacccaggaggtggtgatcggc
ggctggcgccgcggcgagggcggccgctccaccgggatcggtgcgctgatgctgggggtc
ccggtcgacggtggactgcagttcgtcggccgggtgggtaccgggttcaccgacaaggag
ctcgacaagctcaagacgacgctcgaaccgctgcacaccgacgagagcccgttcctcgac
ccgctgccgcgccaggacgccaggggcgtgacgttcgtgcggcccgagctcgtcggcgag
gtccgctacagcgaacgcacctccgacaaccggctgcgccaacccagttggcgggggctg
cggccggacaaatcacccgacgaggtccgctgggaaggcatggggtaa
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