Methylobacterium phyllosphaerae: MCBMB27_04387
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Entry
MCBMB27_04387 CDS
T04968
Name
(GenBank) putative DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mphy
Methylobacterium phyllosphaerae
Pathway
mphy03420
Nucleotide excision repair
mphy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MCBMB27_04387
03430 Mismatch repair
MCBMB27_04387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mphy03400
]
MCBMB27_04387
Enzymes [BR:
mphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MCBMB27_04387
DNA repair and recombination proteins [BR:
mphy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MCBMB27_04387
MMR (mismatch excision repair)
Other MMR factors
MCBMB27_04387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
DUF3553
AAA_11
DUF5133
Motif
Other DBs
NCBI-ProteinID:
APT33678
LinkDB
All DBs
Position
complement(4691013..4693394)
Genome browser
AA seq
793 aa
AA seq
DB search
MQNRPQAQPAGDGAPATSITARAMGALRRDAAGYLEGLNPEQRRAVETTEGPILVLAGAG
TGKTRVLTTRIAHLIATGRARPFDILAVTFTNKAAREMKHRIGTLIGPAGEGMPWLGTFH
AIGTKILRRHAELVGLKSDFTILGTDDQLRLMKQVIADQNVDEKRWPARALSHAIDGWKN
RGLGPEQVPPGEAASFAFGKGGALYTAYQARLATLNAVDFGDLLLLCLKLWRENPDVLAN
YQDRFRYILVDEYQDTNVAQYLWLRLLAQQRKNIACVGDDDQSIYGWRGAEVDNILRFEH
DFPGAVVVRLERNYRSTGHILAAASGLIAKNESRLGKTLRTDDEPGERVTVTGAWDSEEE
ARMLAESIESLQVKQHPLSEIAVLVRISAQMREIEDRFVQLGLPYRVIGGPRFYERAEIR
DALAYLRATVNVSDDLAFERIVNTPKRGLGDATLQQLHTYGRANRLPLRIAAERLCETDE
LKPRVRSTLRALTESFARWARLVEAQPHSEVAQTILEESGYTEMWQKDRSADAAGRLENL
KEFVRSMEEFPDLAAFLEHVSLVMEASEAEGAERVSLMTLHAAKGLEFDTVFLPGWEDGL
FPNQRALDESGRAGLEEERRLAHVGLTRARKRAKLSFAVNRRIHGLWSSTIPSRFIDELP
ETAVDVVEAPAHFSAGASRFDRNPAPFGSSYGTPGWQRAQANTAPGGRSGSGGGFRSAGP
GGRSGGQSGGPRQIEGELIAKSTGAPSAFQAGQRVFHTKFGPGTVAGVDGNKLTVDFDKA
GQKMVLDSFIQAG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccgcccgcaagcgcagcccgccggggacggcgcgcccgccacgtccatcacc
gcccgcgccatgggcgccctccgccgcgacgccgccggctatctcgaggggctcaatccc
gagcagcgccgcgccgtcgagaccacggagggcccgatcctcgtgctggccggcgccggc
accggcaagacccgggtgctgaccacccgcatcgcccacctgatcgccaccgggcgggcg
cgccccttcgacatcctggcggttaccttcaccaacaaggccgcccgggagatgaagcac
cggatcggcacgctgatcggccccgccggcgagggcatgccctggctcggcaccttccac
gccatcggcaccaagatcctgcgccgccacgccgagctggtcgggctcaaatccgacttc
accatcctcggcaccgacgaccagctccggctgatgaagcaggtgatcgccgaccagaac
gtcgacgagaagcgctggccggcccgggccctgtcccacgccatcgacggctggaagaac
cgcggcctcggccccgagcaggtgcccccgggcgaggctgcctcgttcgccttcggaaag
ggcggcgcgctctacaccgcctaccaggcccggctcgcgacgctgaacgccgtcgatttc
ggcgatctcctgctgctctgcctcaagctctggcgggagaaccccgacgtcctggccaat
taccaggaccggttccgctacatcctggtggacgagtaccaggacaccaacgtcgcgcag
tacctgtggctgcgcctgctggcgcaacagcgcaagaacatcgcctgcgtgggcgacgac
gaccagtcgatctacggctggcgcggcgccgaggtcgacaacatcctgcgcttcgagcac
gatttccccggcgcggtggtggtgcggctggagcgcaactaccgctccaccggccatatc
ctcgccgccgcctcggggctgatcgccaagaacgagagccgcctcggcaagaccctgcgc
accgatgacgagccgggcgagcgcgtcaccgtcacgggcgcctgggattccgaggaggag
gcgcggatgctcgccgaatcgatcgaatccctccaggtgaagcagcatcccctgtcggag
atcgccgtgctggtgcggatttccgcgcagatgcgcgagatcgaggatcggttcgtccag
ctcggcctgccctatcgggtcatcggcggcccgcgcttctacgagcgcgccgagatccgc
gacgccctggcgtatctgcgcgccaccgtgaacgtcagcgacgacctcgccttcgagcgg
atcgtgaacacgcccaagcgcggcctgggcgacgccaccctgcagcagctccacacctac
ggccgcgccaaccggctgcccctgcggatcgccgccgagcgcctgtgcgagaccgacgag
ctgaagccccgggtccgctcgaccctgcgggcgctcaccgagagcttcgcacggtgggcg
cggctggtggaggcgcagccgcacagcgaggtcgcgcagacgatcctcgaggaatccggc
tacaccgagatgtggcagaaggaccgctcggccgacgccgccggccggctggagaacctg
aaggaattcgtccgctccatggaggaattccccgacctcgcggccttcctggagcacgtc
tccctggtgatggaggcctccgaggccgagggcgccgagcgggtctcgctgatgacgctc
cacgccgccaaggggctcgaattcgacaccgtgttcctccccggctgggaggacggcctg
ttcccgaaccagcgggcgctggacgagagcggccgcgccggcctggaggaggagcggcgc
ctcgcccatgtgggcctgacccgggcgcgcaagcgggcgaagctgtccttcgcggtcaac
cggcgcatccacgggctctggtcgtcgaccatcccgtcgcggttcatcgacgagttgccc
gagaccgccgtcgacgtggtcgaggcccccgcccacttctcggccggcgcctcgcggttc
gaccgcaacccggcgccgttcggatcgagctacggcacgccgggctggcagcgggcgcag
gccaacaccgcgccgggtggccggtccgggtccggcggcggcttccggtccgcgggcccg
ggcggccgctccggcggccagtccggcggaccccgccagatcgagggcgagctgatcgcc
aagtcgacgggcgcgccctcggccttccaggccggccagcgggtcttccacaccaagttc
gggcccggaacggtcgcgggcgtcgatggcaacaagctcaccgttgacttcgacaaggcc
ggccagaaaatggtgctcgacagcttcatccaggccgggtga
DBGET
integrated database retrieval system
