KEGG   Methanolacinia petrolearia: Mpet_2400
Entry
Mpet_2400         CDS       T01312                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mpi  Methanolacinia petrolearia
Pathway
mpi03030  DNA replication
mpi03410  Base excision repair
mpi03420  Nucleotide excision repair
mpi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mpet_2400
   03410 Base excision repair
    Mpet_2400
   03420 Nucleotide excision repair
    Mpet_2400
   03430 Mismatch repair
    Mpet_2400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpi03032]
    Mpet_2400
   03400 DNA repair and recombination proteins [BR:mpi03400]
    Mpet_2400
Enzymes [BR:mpi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mpet_2400
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mpet_2400
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mpet_2400
DNA replication proteins [BR:mpi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mpet_2400
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mpet_2400
DNA repair and recombination proteins [BR:mpi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mpet_2400
   NER (nucleotide excision repair)
    Other NER factors
     Mpet_2400
   MMR (mismatch excision repair)
    Other MMR factors
     Mpet_2400
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: ADN37147
UniProt: E1RDW0
LinkDB
Position
2400724..2402370
AA seq 548 aa
MQFSEFSEICGQLEKISGRLDTIDMIASHLPGLDDEELPIFIRFLMGRIFPDWSQDKIGI
GPNLVFESVAYVAGNDRSKVVREINKQGDVGTAVENILSKKEQTSFFSENPDLRDVYSDF
AYLSSIEGNRSQKEKLKVIRKLFANAGGAEGKYLSRLILGELRIGIGEGNIRDAIAKAFD
VPTESVEHAYQAANDLGEIAVIAKKGVDELRAVRISLFRPVKMMLAKQGTIAEMVEEQGA
IAAEYKYDGTRFQFHKSGDKCRIYSRKLEEVTTAIPDIVDILVKTTGHDVILDGEVIAVD
GNGNPMPFQHVLKRFRRKHDIASHIENIRLVPNIFDILYLDGETLIDKPFEERRKILVEN
VSLHVAPQIVSDDIITIEAFYREALDAGHEGIMIKSLKSAYTPGQRVRQWIKIKPSVDTI
DLAVVGAEWGEGKRAHLFGSFILACQDESGRLLRISKVATGFSDEALAGVYDLLKDTEIS
ESGKVVSFEPEVVFEVGYAEIQKSTNYEAGYALRFPRFIRFRDDKGIDEIETISSIEDRF
RAQSEKIR
NT seq 1647 nt   +upstreamnt  +downstreamnt
atgcagtttagcgaattttcagagatctgcgggcaattggagaagatctccggaaggctt
gatacgatagacatgatcgcatcccatcttcccggactggacgacgaggaactcccgata
tttatcaggttcctgatgggcaggatctttccagactggagtcaggacaagatcgggatc
gggccgaatcttgtattcgagtcggttgcatatgtcgcagggaacgacaggagcaaagtt
gtcagggagataaacaaacagggcgatgtggggaccgcagttgaaaatatcctctccaaa
aaagagcagacatcatttttttcagaaaatcccgatctcagggatgtatattcggatttc
gcctatctttcctcgatagaagggaaccggtcccaaaaagagaagctgaaggtcatcagg
aaattattcgcaaatgccggtggggccgaagggaaatacctctcaaggctgatcctcggt
gaactcaggatcggaataggtgaaggcaacatccgcgacgcgatcgcaaaggcgttcgat
gtcccgacggagtcggtcgagcatgcgtaccaggcggcaaacgatctcggcgagatcgcg
gtaattgcaaaaaaaggggttgatgaattaagggcagtcaggatatcgctcttcaggccg
gtaaagatgatgcttgcaaagcagggaacgatcgctgagatggttgaggaacagggtgca
attgcggcggagtacaaatacgacggaaccagattccagttccacaaatccggtgacaag
tgcaggatctactcgagaaaacttgaagaggtcaccactgcaatccccgatatcgtcgac
attctcgttaaaacgaccggacacgatgttatacttgacggtgaggtcatcgcggtcgac
gggaacggaaatccgatgcctttccagcatgtcctgaagagattcaggagaaaacacgac
attgcatcgcatattgaaaatatcaggcttgtcccgaacatattcgatatcctctatctc
gacggggagactctcattgacaaaccgtttgaggagagaagaaaaatcctcgttgagaac
gtctcattacatgtagcaccccagatagtttccgacgatattataaccatcgaagcgttc
tacagggaagctctcgacgcgggccacgagggaataatgatcaaatcgctcaaatcggca
tatacaccgggacagagggttcgccagtggataaagatcaagccctccgtcgatactata
gaccttgcagtagttggtgctgaatggggcgaagggaaacgcgcccatctattcgggtca
ttcatcctcgcatgccaggatgaatccggaagactccttaggatatcgaaggttgcgacg
ggtttttcggacgaggctctcgcaggagtatatgatctcctgaaggacacggagatctcc
gagtccggcaaggtagttagtttcgagcctgaagttgtgtttgaggtaggatatgccgag
atccagaagagcaccaattacgaggccggctatgcactcaggttcccgagattcatccgc
ttcagggacgacaagggtattgacgagatcgaaacgatctcatcgattgaagatcgtttc
agggcacagtcagaaaaaatcagataa

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