Micromonas pusilla: MICPUCDRAFT_40215
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Entry
MICPUCDRAFT_40215 CDS
T02696
Symbol
JGI:MicpuC2_40215
Name
(RefSeq) uncharacterized protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
mpp
Micromonas pusilla
Pathway
mpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
MICPUCDRAFT_40215 (JGI:MicpuC2_40215)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpp03400
]
MICPUCDRAFT_40215 (JGI:MicpuC2_40215)
DNA repair and recombination proteins [BR:
mpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
MICPUCDRAFT_40215 (JGI:MicpuC2_40215)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PTM_DIR17_Tudor
MutS_IV
Tudor_5
BAHCC1-like_Tudor
Motif
Other DBs
NCBI-GeneID:
9684645
NCBI-ProteinID:
XP_003059499
JGI:
40215
UniProt:
C1MUI5
LinkDB
All DBs
Position
Unknown
AA seq
1434 aa
AA seq
DB search
MAPPKTPNDAKGMRSISSFFAPRTNTPKTSAAPESAKPKPDAATSDSPDENRDDRDDEPR
AAKAAKLDATTAPGAVARKETDERAEEEKDEPPLATSTPDAPSTATAAVAEKRAAIVESE
PSPPSAMEMDEEEDDDVKDGRADVGRRIAVFWKKEKRFYAGKVAAFDAKRKKHRVLYDDG
DDEWIAIQKRRVKWDEAAAAEAKGGDDDDDDDDGDESDTAAAASDDDDDDDDDALGAEEG
KRRGGRVTARRAAAAAALKKVGGGGKGGGEASRPSRASAKRKVVLSDSDVDFDGGEGDGD
DGGDDEESDFDVEEEESDDDDDDASDDDASESESYGAEAKKKRAPPPAKKKTSAASPAKR
STAAAPPPATLPPIDASSRNPNAAKSFAERMASATATATAATTTTTDGDGDGAPNAAAAA
LAGPAQYADRDRLQFPWLQPENRRDASGKRPNEPGYDKSTLLLPKDFPKCKDANGKPFTV
SPGQAQWWRFKASHFDSVIMFKMGKFYELFEMDAHVGAADLGLMYMKGEQPHCGFPEKNY
AANAERLARAGHRVVIVEQTETPAQLAERKAAGKTRDNVVMREKVAVLTRGTLVDPEMCE
ASPDAAYCVATFDGGAVATGEGAEDERWVGVCAADCATGRFLLGAWLDDAHLSGLRTALA
TDAIRDAAPDAQTRSCGRDTCADDALEALRDGAYFPTLAGGASAPNAGATCGVKLPDVLA
TLATTAPARERAAGLGAFGVMHAYLSLAMLDRDLIPLGRVEALPGPGDAVAAAWSHGGYV
AMDAAALSGLEVLEGADGGSRGSLLSSLDRCASGPGRRTLRRWVCRPLRSHLAVEERQRA
VRCLRGVASDALRSAQGRMRKAPDLERAVSRLVGAAGGRGRDAANVILYEDAAKARLNGF
LRALEGMRAARDIARDFDDVRAAIADANAPSLRALVTEGGGGDAPPDAIAAVAGAALPEL
TEALAHFERAFDWDGARASGRIEPKPGADAAVDAADARLAAADDALAEWLSDARKKIGGG
KSEVAFVRANKDTHLVEVPDRLSSRVPAGWQREGKRKGFERFDSPELGTMRKERAAAEEA
REDALGKVLSGLVLKFCEEWPRWQRAAEAIACLDALCSLALAAEDLAACCAQTCTPVLLP
PPSTEDAKPSLSASRLTHPTVGAMSGGKAFVPNDTFLGGETPASPPFLLLTGPNMGGKST
LLRQVCLAAVMAHVGADVPAASFTMTAADAIYVRMGAKDNIVGGQSTFMVELSETAAMLR
RATRNSLVALDELGRGTATTDGAAIAHAVVRHLVDLGARSLFSTHYHRLADDRAGDARVR
LAHMGCEVSGDRGAERVTFLYALREGACPKSYGVNVARLAGLPESVLKLAAEKSAEMETE
RRGEGPSSPLPCAGLSDARVMELAKAALRARDDADAIAAVWRDARRAAGLPVPE
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgaagaccccgaacgacgcgaaggggatgcggagcatctcgagcttcttc
gcgccgcggacgaacacgccgaagacgtccgcggcgccggagtcggcgaagccgaagccg
gacgccgcgacgtcggattcgcccgacgagaaccgcgacgatcgcgacgacgagccccgc
gcggcgaaagcggcgaagctcgacgcgacgaccgcgcccggggcggtcgcgaggaaggag
acggacgagcgcgcggaggaggagaaggacgagccgcctctcgcgacgagcacgccggac
gcgccgtcgaccgcgaccgcggcggtcgcggagaagcgcgcggcgatcgtcgaatccgag
ccgtccccgccgagcgcgatggagatggacgaggaggaggacgacgacgtgaaggacggg
agagcggacgtcgggcgacggatcgcggtgttctggaagaaagagaagcgcttctacgcc
gggaaagtcgccgcgttcgacgcgaagagaaagaagcatcgcgtcctgtacgacgacggc
gacgacgagtggatcgcgattcaaaagcgccgcgtgaagtgggacgaagccgccgccgcg
gaggccaagggcggcgacgacgacgacgacgacgacgacggcgacgagagcgacaccgcg
gcggcggcgagcgatgacgacgacgacgacgacgacgacgcgttgggcgcggaagaaggg
aagagacgaggcggccgcgtcaccgcgagacgcgcggcggcggcggcggcgctgaaaaaa
gtcggcggcggaggtaaaggcggaggagaagcgtcgcggccgtcgcgcgcgagcgcgaag
aggaaagtggtcctcagcgacagcgacgtcgacttcgatggaggagaaggagacggcgac
gacggcggcgacgatgaagagagcgacttcgacgtcgaagaggaagagagcgacgacgac
gacgacgacgcgagcgacgacgacgcgagcgagagcgagtcatacggagccgaggcgaag
aagaaacgcgcgccgccgcccgcgaagaagaagacgtccgcggcgtcgccggcgaagagg
tccaccgccgccgcgccgccgccggcgacgctccctccgatcgacgcgtcgtcgcggaac
ccgaacgcggccaaatcgttcgcggagcgcatggcgtcggcgacggcgacggcgacggcg
gcgacgacgacgacgacggacggcgacggcgacggcgcgccgaacgccgccgccgccgcg
ctcgcgggcccggcgcagtacgcggaccgcgaccgccttcagttcccgtggctgcagccg
gagaaccgccgcgacgcgagcgggaaacgcccgaacgaaccggggtacgacaagtccacg
ctgctcctcccgaaagatttcccaaagtgcaaagacgccaacggcaagccgttcacggtg
tcccccggccaagcgcagtggtggcgcttcaaagcgtcgcacttcgacagcgtcatcatg
ttcaagatgggcaagttctacgagctcttcgagatggacgcacacgtcggcgccgcggac
ttgggtctgatgtacatgaagggcgagcagccgcactgcggctttccggagaagaattac
gccgccaacgccgagcgactcgcgcgcgcggggcaccgcgtcgtcatcgtcgagcagacg
gagacccccgcgcagctcgcggagaggaaggctgcggggaagacgagagataacgtcgtc
atgcgcgagaaagtcgcggtgctcacgcgcgggacgctggtcgacccggagatgtgcgag
gcgtcccccgacgcggcgtactgcgtcgcgacgtttgacggaggcgccgtcgcgacgggg
gagggcgccgaggacgagcggtgggtcggcgtctgcgccgcggactgcgcgaccggccgg
ttcctcctcggcgcgtggctcgacgacgcgcacctgtccgggcttcgaaccgcgctcgcg
acagacgcgatccgagacgccgcgcccgacgcgcagacgcggtcgtgcgggagggacacg
tgcgcggacgacgcgctggaggcgctgcgggacggcgcgtacttcccgacgctcgcgggc
ggcgcgagcgctccgaacgccggcgcgacgtgcggcgtcaagctcccggacgtgctcgcg
acgctcgcgacgacggcgcccgcgcgcgaacgcgccgccggtctcggcgcgtttggcgtc
atgcacgcctatctctcgctcgcgatgctcgaccgcgacttgatccctctcgggcgcgtc
gaggcgcttccggggcctggcgacgccgtcgccgccgcgtggtcgcacggagggtacgtc
gccatggacgccgcggcgctgagcggactcgaggtgctggagggcgcggacggcgggtcg
agagggtcgctgctgagctcgctcgatcgatgcgcgtcggggcccgggcggcggacgctg
cggcgatgggtgtgccgtccgctgcggtcgcacctcgcggtcgaggagcggcagcgcgcg
gtgcgatgccttcgcggcgtcgcctcggacgcgctgcgaagcgcgcaggggcgcatgcga
aaggcgccggatctcgagcgcgcggtgagcaggctcgtcggcgccgcgggcgggcgaggc
cgcgacgccgcgaacgtgattctgtacgaggacgcggcgaaagcgcgtctgaacgggttt
ctcagagcgctcgaggggatgcgcgcggcgagggacatcgcgcgcgacttcgacgacgtc
cgcgcggcgatcgcggacgcgaacgcgccgtcgctgcgcgcgctcgtgaccgagggcggc
ggcggggacgcgccgccggacgccatcgccgccgtcgcgggcgcggcgttgccagagctc
acggaggcgctcgcgcacttcgagcgcgcgttcgattgggacggcgcgcgcgcgagcggg
cggatcgagccgaagcccggcgcggacgcggccgttgacgccgcggacgcgaggctcgcg
gccgcggacgacgcgctcgcggagtggctgtcggacgcgcgtaagaaaatcggcggcggg
aagagcgaagtcgcgttcgtgcgcgcgaacaaagacacgcacttggtcgaggttccggat
cgtctgtcctcgagggtcccggcggggtggcagcgggaaggaaaacgtaaagggttcgag
cgtttcgactcccccgagctcgggacgatgcggaaagagcgcgccgccgcggaggaggcg
agagaggacgcgctcgggaaggttctctccgggctcgtgttgaaattttgcgaggagtgg
ccgcggtggcagcgcgccgcggaagcgatcgcgtgcctcgacgcgctgtgctcgctcgcg
ctcgcggcggaagacctcgcggcgtgctgcgcgcagacgtgcacgccggtgttgctgccg
ccgccgtcgacggaagacgcgaagccgtcgctgagcgcgtcgcggctgacccacccgacg
gtgggcgcgatgagcggagggaaggcgttcgttccgaacgacaccttcttgggcggagaa
acgcccgcatcgccgccgttcctcttactcaccggcccgaacatgggcggcaagagcacg
ctgctgcgacaggtgtgtctcgccgcggtcatggcgcacgtcggcgcggacgtccccgcg
gcgtccttcacgatgaccgccgccgacgcgatttacgttcgcatgggcgccaaggacaac
atcgtcggcgggcagtccacgttcatggtcgagctctcggagaccgcggcgatgctccgc
cgcgcgacgcgcaactccctcgtcgccctggacgagctcggcagaggcaccgcgacgacg
gacggcgccgcgatcgcgcacgcggtcgtgcgccacctcgtcgatctcggcgcgcggtcg
ctgttttcgacgcactaccaccgcctcgcggacgaccgagcgggcgacgcgcgcgtgcgg
ttggcgcacatgggctgcgaagtctccggcgaccgcggcgcggagcgcgtgacgttctta
tacgcgctcagagagggcgcgtgcccgaagagttacggcgtgaacgtcgctcggctcgcg
gggctcccggagagcgtcctgaagctcgccgcggagaagagcgcggagatggagacggag
cgacgcggggaggggccctcatcgccgcttccgtgcgcggggctgagcgacgcgcgggtg
atggagctcgcgaaggcggcgttgcgcgcgagggacgacgcggacgcgatcgcggcggtg
tggagagacgcgaggagggcggcggggttgcccgtcccggagtag
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