Micromonas pusilla: MICPUCDRAFT_53555
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Entry
MICPUCDRAFT_53555 CDS
T02696
Symbol
UVRBC, JGI:MicpuC2_53555
Name
(RefSeq) exinuclease ABC subunits B and C-containing protein
Organism
mpp
Micromonas pusilla
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
Helicase_C
UvrB
ResIII
DEAD
GIY-YIG
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
9689281
NCBI-ProteinID:
XP_003063671
JGI:
53555
UniProt:
C1N749
LinkDB
All DBs
Position
Unknown
AA seq
1800 aa
AA seq
DB search
MSACGRANNTHGNGNMRRLNRALADAVARGRRRASSAQRWVAPPERSLATIARQQQIQNH
HRRRLAGGRGGDLLGPPWRGRATAALRGGDDDVAAAASSSSPPADPPASSSSSVRAPFAP
AGDQPAAIADCARLVHDERRRFTCLRGATGTGKTFVVANVIASQPKPIPTLVVVPNKTLA
AQVARELRAYLRDSRHVELFVSHFSLYVPESYSRGRYVEKRSAVDKDLEALRHRATKALL
ESDDVVVVASVSCLYGMGMPSDYVDARLCFERGVPGLGVAGQDAVARRLTESLLYEETKD
ARWDGVSRGQWAWQGEADADVDGARRIAVWPPYEEAPVEMDVAPDGSLVGFGRMRSAYDA
DASYVEADVEADVAVAGKKKKKKTATRGTRRGDFVSAAADGEPLPPPPDRVTIWPRQHHI
TPPERLAVAAEAIKAEMRARSAELRANGLQIEADRLEQRTKADVGLLRELGWCPGAEHYS
RHLGGRDEGAPPVTLLDYFNFSTTAEAGGAFGGGDSKPKRDWLLVADESHVMLPQLKAMH
GGDRSRKLGLVAGGYRLPSALDNRPLTFDEFWERVPRALLVSATPGAIEEAWCGGGGESE
SESSSDSEASVDVARREIRVMPSGEVAVLSSSSPPPPPPPPPPPPPPPSSSLSHSMVDMV
VRPSGVLDPPVTVLPRAKQLPEIARLVRERAARGEASLVCALTKADCEDLAGYLNCLGGA
RADWLHSELTAPQRAKKLQRLQQGEIDVLVGAQLLREGLDLPQVSLVAVLDAGVPGFMRS
SRSLIQMHGRAARNARGECYFFADEPYTEAMTEAIDEIDRRRAKQSAHNAKHGITPKNAV
AGSSSASLSLFEVMSDEIAATKGEITQAAEAKAHAAVVANARAGGANGALFERPTDEEVE
AALKKWRMRRAGATAAADAAKAAAAASARAKLESTASVSGPAAAWAALGDRFTEREFTAA
LFAAPSSSDAVVETSDTQNVSEYSNVSDENDAFAAPRAARRAAEDVLAAHGHAIDHVESL
RRAVADMPAKTGIYRWLAEDGEVLYVGKAKNLRDRTRGYLSPALLERSPRHRTLAAKARS
VDNVLTPGGESDALALEARLIERFKPPLNVLLKHAPRPDAALIVATISDEVPRFFVVDAG
SVAAERATTTANLAGGGGGDVKNNVVAAPPSHRNRLGLDGVGGRVSPGVVAAAVGGVGVG
GSNPGGVRAWLRPTRADAMRSLGDLERALSLRSLAFRARHGDDDAVASLREAATFAAAAL
DGGQAAEDAATTLDARDERAAAASIRAAAAPGDAAMGALSALLAEDSRGSALRVDVVAAA
SEGEHCAVQIVRIRDGTIAGMLTADVALPGTRGRGDAGTRGRGEAGTRPRRAKGREDSVV
DAAGARVAWIGEGEEAEEEEEADALGFDDDDDDDERVAMEVVLGEAAQRALEAYYNVDNG
EGASVLNARDVPDAIYTPHALPDPSGLERVVRAAAAAAVGADADASGTPPPLNSKTNKQP
RRYVKHGIDLPPGLPTSLASLARANAVESARRTANVVAASRGLARVLRLPIASDAASSSS
SSDVAIRTIEGVDVSHLAGSSTAASVVSFVDGRADNAGHRRYELKNTGTGGGDIAPGDDP
AAIYAAVYKRVGSVRSKPLPDLLLIDGGKAQLAAAAEALRARNVEIVNLQGVGVGVGGGQ
DARASGDSTRPRVALASLSKGRLSGEESVYVPAAAGENGDGFAAVRVRAGAAEDVAGAKQ
NLDPGMVLLRLVRDESHAVALGAHRRRRRSALFREMLDASDDGGGGGGGERGGIAVAVAE
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgtgcggacgcgcgaacaacacgcacggcaacggcaacatgcgccgactgaat
cgcgcgctcgcggacgcggtcgcgcgcgggcgccgccgcgcgtcgtccgcgcagcgatgg
gtcgccccaccagagcgatcgctcgcgacgatcgcgcgccaacaacagatacaaaatcat
catcgtcgtcgtctcgcgggaggtcgcgggggcgacctcctcggtcctccttggcgcgga
cgcgcgaccgcggcgctgcgaggaggcgacgacgacgtcgcggcggcggcgtcgtcctcg
tcgccgcccgcggatccgcccgcgtcctcctcctcctccgtgcgcgcgccgttcgcgccc
gcgggcgatcagcccgccgcgatcgcagactgcgcgcgactcgtccacgacgagcggcgc
cgcttcacgtgcctgcgcggcgcgaccggcacgggcaagaccttcgtcgtcgccaacgtc
atcgcgtcgcaacccaaaccaattccgacgctggtcgtcgtcccgaacaagacgctcgcc
gcgcaggtggcgcgcgagctccgcgcgtatctccgcgacagtcgtcacgtcgagctgttc
gtgtcgcacttttcgctgtacgtcccggagtcgtactcgcgcgggcggtacgtcgagaag
cggagcgcggtcgataaggacctcgaggcgctcaggcacagggcgacgaaggcgctgctg
gagagcgacgacgtcgtcgtcgtcgcgtccgtgtcgtgtctctacgggatggggatgccg
agcgattacgtcgacgcgcggctgtgtttcgaacgcggggtaccgggactcggcgtcgcg
ggtcaagacgcggtcgccaggcggctcacggagtcgctcctgtacgaggagacgaaagac
gcgcggtgggacggcgtgtcgcgcgggcagtgggcgtggcagggcgaggcagacgctgac
gtggacggcgcgcggcggatagcggtgtggccgccgtacgaggaggcgccggtggagatg
gacgtcgcgccggacgggtcgctggtcgggttcggacgcatgcggagcgcgtacgacgct
gatgcttcttacgtggaagctgacgtggaagctgacgtggccgtcgcggggaagaagaag
aagaagaagacagcgacgcgagggacacgacgaggggatttcgtgagcgccgccgcggac
ggcgagccgctgccgccgcctcccgaccgcgtcacgatctggccgcggcagcatcacatc
accccgcccgagcgcctcgccgtcgccgccgaggcgatcaaggctgagatgcgcgcgcgg
tccgcggagctccgcgcgaacgggcttcagatcgaggcggaccgtctcgagcagcgcaca
aaggcggacgtcgggcttctgcgcgagctcgggtggtgccctggcgcggagcactacagc
cggcatctcggcgggagggacgagggcgcgccgccggtgacgctgttggattatttcaac
ttttcgacgacggccgaagccggcggcgcgttcggcggcggcgattcgaagccgaagcgc
gattggctcctcgtcgcggacgagtcgcacgtcatgctccctcagctcaaggcgatgcac
ggcggggaccggtcgaggaagctcgggctcgtcgccggagggtacaggctgccatcggcg
ttggataaccgcccgctgacgttcgacgagttttgggagcgggtcccgcgcgcgttgctc
gtgagcgcgaccccgggggcgatcgaggaggcgtggtgcggcggcgggggtgaatcggaa
tcggaatcgtcttcagattcagaagcgtccgttgacgtggcgagacgagagatccgggtg
atgccgagcggcgaggtcgcggtgctctcgtcgtcgtcgccgccgccgccgccgccgccg
ccgccgccgccgccgccgccgccgtcgtcgtcgttgtcgcactccatggtcgacatggtc
gtccgcccgagcggcgtcctcgaccccccggtcacggtcctcccgcgcgcgaagcagctc
cccgagatcgcgcgcctcgtccgcgagcgcgccgcgcgcggggaagcgtccctcgtctgc
gcgctcacgaaggcggactgcgaggacctcgccggatacctcaactgcctcggcggcgcg
cgcgcggattggctgcacagcgaactcaccgcgccgcagcgcgcgaagaagctgcagagg
ttgcagcagggcgagatcgacgtcctcgtcggcgcgcagctcctgcgcgagggcttggac
ctcccgcaggtgagcctggtcgcggtgctcgacgcgggggtccctgggttcatgcgaagc
tcgcggtcgttgattcagatgcacggccgcgcggctcgaaacgcgcgcggggagtgctac
ttcttcgcggacgagccgtacacggaggcgatgacggaggcgatcgacgagatcgacaga
cgccgcgcgaagcagagcgcgcacaacgcgaagcacgggataacgcccaagaacgcggtc
gccgggtcgtcgagcgcgtcgctgagtttgttcgaagtcatgtccgacgaaatcgcggcg
acgaaaggggagatcacgcaagccgcggaggcgaaagcgcacgccgcggtcgtcgcgaac
gcgcgcgcgggcggcgcgaacggagcgttgttcgaacgtccgaccgacgaagaggtcgag
gccgcgctgaagaagtggcggatgcgtcgggcgggcgcgacggcggcggcggacgcggca
aaagccgccgccgcggcgtccgcgcgggccaagctggagtccaccgcgagcgtctccggg
cccgccgccgcgtgggccgcgctcggggaccggttcacggagcgggagttcaccgccgcg
ctgttcgcggcgccgtcgtcgtccgacgccgtggtggaaacgtcggacacacagaacgtg
tcggaatattcgaacgtgtcggacgagaatgacgcgttcgctgcgccgcgggctgcgcgc
cgcgccgcggaggacgtcctcgccgcgcacggccacgcgatcgaccacgtcgaatccctg
cgccgcgcggtcgcggacatgcccgcgaagacggggatataccgctggctcgcggaggac
ggcgaggtgctctacgtcggcaaggcgaaaaatttacgcgacagaacgcgcgggtactta
tcccccgcgttgctcgaacgttcgccgcgtcaccgcacgctcgcggcgaaggcgcgaagc
gtagacaacgtgttgaccccgggcggcgagagcgacgcgctcgcgctcgaggcgcggctg
atcgagcgctttaaaccgccgttgaacgtgctgttgaagcacgcgccgaggccggacgcg
gcgctcatagtggcgacgatttcggacgaggtgccgaggtttttcgtcgtcgacgcgggg
tcggtcgcggcggagagagcgacgacgacggcgaatttggcgggcggcggcggcggcgat
gtgaagaacaacgttgtggcggcgcccccatcgcaccggaaccgactcggtctcgacggc
gtcggcgggcgcgtctcgcccggcgtcgtcgccgccgccgtcggcggcgtcggcgtcggc
ggttcgaatcccggcggcgtccgcgcgtggctccgtccgacgcgcgcggacgccatgcgc
tcgctcggggacctcgagcgcgcgctttcgctccgctcgctcgcgttccgcgcgcgccac
ggcgacgacgacgcggtcgcgtcgctccgagaggcggcgacgttcgccgccgcggcgctc
gacggcggccaagccgcggaagacgccgcgacgacgctcgacgcgcgagacgagcgcgcc
gccgcggcgtcgattcgcgcggcggccgcgccgggcgacgccgcgatgggcgctttgagc
gcgctgctcgcggaggacagcagagggagcgcgctgcgcgtggacgtcgtcgccgccgcc
tccgagggggagcactgcgcggtgcagatcgtgcggatacgcgacgggaccatcgcgggg
atgttgaccgccgacgtcgcgttgccagggacgcggggacgcggggacgcggggacgcgg
ggacgcggggaggcggggacgcgaccgcgacgcgcgaaggggagggaggatagcgtcgtc
gacgccgccggcgcgcgcgtcgcgtggatcggcgagggagaggaggcggaggaggaggag
gaagccgacgcgctcggattcgacgacgacgacgacgacgacgagcgcgtcgcgatggag
gttgtcctcggcgaagccgcgcagagagcgctcgaggcgtactacaacgtcgataacggc
gagggtgcgagcgttttgaacgcgcgggacgtacccgacgcgatctacacgccgcacgcg
ctgccggacccgagcgggttggagcgcgtcgttcgcgccgccgccgccgccgccgtcggc
gccgacgccgacgcgtccggaacgccgccgccgctgaattcgaagactaataagcagccg
aggaggtacgtcaagcacgggatcgacctccctcccggccttcccacgtcgctcgcgtcg
ctcgcgcgcgcgaacgcggtcgaatccgcgcgacgcaccgcgaacgtcgtcgccgcgagc
cgaggcctcgcgcgcgttcttcgacttccgatcgcgtccgacgccgcgtcgtcgtcgtca
tcgtccgacgtcgcgattcgcacgatcgagggcgtggacgtctcccacctcgccgggtcg
tccaccgccgcgtccgtcgtgtccttcgtcgacggcagggcggacaacgcggggcaccgt
cggtacgagctcaagaacaccggaacaggcggcggcgacatcgcgccgggggacgacccc
gcggcgatctacgccgccgtgtacaagcgcgtcgggagcgttcgatcgaaaccgctcccg
gacttgcttctgatcgacggtgggaaggcgcagctcgcggccgcggcggaggcgctgcgc
gcgcggaacgtcgagatcgtgaacttgcaaggagtcggagtcggcgtcggcgggggccaa
gacgcgcgcgcgagcggcgactcgacgcgtccgcgcgtcgcgctcgcgtcgttgtccaag
ggtcgtctcagcggcgaagagtccgtgtacgtccccgccgccgccggggagaacggcgac
gggttcgccgccgtgcgcgtgcgcgcgggcgccgcggaggacgtcgccggagcgaagcag
aacctcgacccggggatggtgctgctgcggctcgtgagggacgagtcgcacgcggtcgcg
ctcggcgcgcatcgaagacggcggcggagcgcgttattccgcgagatgctggacgcgtcg
gacgacggcggcggcggcggcggcggcgagaggggggggatcgccgtcgccgtcgcggag
tga
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