Micromonas pusilla: MICPUCDRAFT_58044 Help Entry MICPUCDRAFT_58044 CDS       T02696                                  Symbol JGI:MicpuC2_58044 Name (RefSeq) SNF2 super family   KO K15083   DNA repair protein RAD16 Organism mpp  Micromonas pusilla Brite KEGG Orthology (KO) [BR:mpp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mpp03400]     MICPUCDRAFT_58044 (JGI:MicpuC2_58044) DNA repair and recombination proteins [BR:mpp03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      NER4 complex       MICPUCDRAFT_58044 (JGI:MicpuC2_58044) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom Helicase_C HMG_box HMG_box_2 zf-PARP zf-RING_2 zf-RING_UBOX zf-C3HC4 ResIII zf-RING_5 zf-RING_11 Protamine_like zf-rbx1 zf-ANAPC11 zf-Nse zf-C3HC4_2 Motif Other DBs NCBI-GeneID:  9683915 NCBI-ProteinID:  XP_003058476 JGI:  58044 UniProt:  C1MTE8 LinkDB All DBs Position Unknown AA seq 1251 aa AA seqDB search MSKMLTIYEEDGVREWKIAEYDCEPLYSHVVEIAKSGRARCRRCSELIAKDTVRVGVPIK WRGGMFGWISSWQHPACLRVPGYTRDELSESIHGAKTLLTEAQLESLLDELTNPEAAELD EIDPNASDFLVRADAPSLDAPTTLTRELLSFQREGLGWMVANEASDVRGGILADEMGMGK TIQCISLLLHQKAKRAAERVKKAKDGVAASVADLAPRPTLVVVPTSALAQWEEEIRACTS PNALSVLVYYADRKSLTPEVVARHDVVLTTYPVVEGEWRKVVNRDLVRCEYCGKKLLPRS MISHKKYFCGPEAVRTAKLAKREVKRDVANEKAMRTLKIKSGKASDVVDANADVVDAKKK KKKKPKRLDADANIAREVADAMPTISNVYKELMAKAGRPARSMYEAAHDARANPFGGGGD DDDGSDSDDGSDSGSDSGSVMIVGETPGDDADDDVLRVVMEVSRLEEEERRRKRDHDGLM GVGGAAKGKAKASEKQKQKSSDDTSIKKKPKRTPGPYVNFCKETRPKIVEENPGITFGEV GKKLGEAWKKLSDDEKERYRSKVIPPEEEPKVELKVEPAVVVEARGKRTTRGASASAVVV KEEENTDDDDAAKKASKKASKKRKSRRAGSDSDSDSDWSPTEDDAKRSQEDADSQIARAL AMVTESSDASPDGGGSGLGAGEDDVDLSDSLLHAVTWERIVLDEAHKIKARTTNTAKCIY ALRSAYKWCLTGTPLQNRVGELYSLVRFLRMDPHAYYFCKVKGCECKSLCWNFGPNQRAC AECGHAGPRHYSHFNQTVINPITRYGYVGDGKKGFLTLRNDVLLPAQLRRTKAERAADVK LPPLKIEIRETEFDEVERDFYDSLYMLTRAKFDGYVKKGSVLHNYAHIFELLSRLRQACD HPYLVIHSKTAGATGQGAALGEKKKKNANPTDALPDDDDVCRAISIAGAEEPKHYCGLCQ DETEADDAALAGCKHVFHRECILQYGCVAASPESGKKVTCPVCRVPLTIDLQPTDLSGVP TRVATSIAAKKKDELPAKSILSRIDLTKYTSSTKVETLLRALREMRSGADGHLNKAIVFS QYTSMIDIAEWRLKKEKFVVAKLLGSMPVTQRAANLKAFRDDPNVSVILMSLKSGGEGLN LQAANYVFVLEPWWNPAVEMQARDAPAGPRGFILYFTHPSVSTFDRAVMRAHRIGQRRAV TAVRFSTKNTIEERMMQLQEKKRLVFEGCMDGNQASLSQLTEEDLQFLFKR NT seq 3756 nt NT seq  +upstreamnt  +downstreamnt atgtcgaagatgctgacgatatacgaggaggacggcgtgcgagagtggaagatcgcggag tacgactgcgagccgctgtactcgcacgtcgtcgagatcgcgaagagcggccgcgcgcga tgtcgcaggtgcagcgagctcatcgcgaaggacaccgtccgcgtcggcgtcccgatcaag tggcgcggcggcatgttcggatggatctcgagctggcagcatcccgcgtgcctgcgcgtc cccggctacacgcgcgacgagctgagcgagtccatccacggcgcgaagacgctcttgacc gaggcgcagctcgagtccctcctcgacgagctcacgaatccggaggcggcggagctggac gagatcgacccgaacgcgagcgacttcctcgtccgcgcggacgcgccgtcgctcgacgcg ccgacgacgctgacgcgagagctcctgtcgtttcagagggagggcctcgggtggatggtc gcgaacgaggcgtcggacgtgagaggcgggatcctcgcggacgagatggggatggggaag acgatccagtgcatctcgctgctgctgcatcagaaagcgaagagggcggcggagcgcgtg aaaaaggcgaaagacggcgtcgcggcgagcgtcgcggacctcgcgcctcggccgacgctc gtcgtcgtcccgacgtcggcgctcgcgcagtgggaggaagagatacgcgcgtgcacgtcg ccgaacgcgctgtccgtgctcgtgtactacgcggaccgcaagtcgctcactccggaggtg gtagcgaggcacgacgtcgtgctgacgacgtacccggtcgtggagggcgagtggaggaag gtggtgaaccgcgacctcgtgcggtgcgagtactgcggcaaaaaacttctcccgcgatcg atgatctcgcacaagaagtacttctgcggcccggaagcggtgcgcaccgcgaagctggcg aagagggaagtcaagcgcgacgtcgcgaacgagaaggcgatgcgaacgctgaagatcaag agcgggaaagcgagcgacgtcgtcgacgcgaacgcggacgtcgtcgacgcgaagaagaag aagaagaagaaaccgaagaggctcgacgcggacgcaaacatcgcgagagaggtcgcagac gcgatgccgaccatcagcaacgtgtacaaggagctcatggcgaaagcggggcgcccggcg cggagcatgtacgaggccgcgcacgacgcgagggcgaatccgttcggagggggaggggac gacgacgacggttcggattccgatgacggttcggattccggctcggattccggctcggtg atgatcgtcggcgagacgcccggggacgacgcggacgacgacgtcctgcgcgtcgtcatg gaggtgtcgcgcctcgaggaggaggagcggcgacggaagcgcgaccacgacgggctcatg ggcgtcgggggagcggcgaagggtaaagcgaaggcgtcggagaagcagaagcagaagtcg tcggacgatacgagtataaagaagaagccgaagcgaacgcccggtccgtacgtgaacttt tgcaaggagacgcggccgaagatcgtcgaggaaaacccgggaatcacgttcggcgaggtc gggaagaaactcggcgaggcgtggaagaagctgagcgacgacgagaaggagcgataccgc tcgaaggttataccgcccgaggaggagcccaaggtggagctcaaggtggagcccgccgtc gtcgtcgaggcgcgggggaagcgaaccacgcgcggcgcgagcgcgagcgccgtcgtcgtc aaggaagaggagaacaccgatgacgacgacgccgcgaagaaggcgtcgaagaaggcgtcg aagaagcgcaagtccagacgcgccgggagcgactccgactccgactccgactggtccccg accgaggacgacgcgaagcggtcccaggaagacgcggactcgcagatcgcgcgcgcgctc gcgatggtaacagagtcctccgacgcgtccccggacggcggcggctccggcctcggcgcc ggcgaagacgacgtcgacctctccgactcgctcttgcacgcggtgacgtgggaacggatc gtcctggacgaggcgcacaagatcaaagcgcgaacgacgaacaccgcgaagtgcatatac gccctgcgcagcgcgtacaagtggtgcctgaccgggacgccgctgcagaaccgcgtcggg gagttgtactcgctcgtgcgtttccttcgcatggacccgcacgcgtattacttttgcaaa gtcaaaggctgcgagtgcaagtctctgtgttggaacttcggcccgaaccagcgcgcgtgc gcggagtgcgggcacgccgggccgaggcattactcgcacttcaaccagacggtgatcaac ccgatcacgcggtacggatacgtcggcgacggcaagaagggtttcctcacgctccgcaac gacgtcctcctccccgcgcaactccgtcggacgaaggcggagagagccgcggacgtgaag ctgccgccgctgaagattgagattcgcgagactgagttcgacgaggtcgagcgcgacttc tacgactcgctgtacatgctcacgagggccaagttcgacgggtacgtcaagaagggcagc gtcttgcacaactacgcgcacatcttcgaactgctctcgcggctgcgtcaggcgtgcgac cacccgtacctcgtgattcactccaagaccgcgggcgcgaccgggcagggcgcggcgctc ggggaaaagaagaagaagaacgcgaacccgaccgacgcgcttccggacgacgacgacgtc tgccgcgccatctccatcgccggcgcggaggagccgaagcattactgcggcttgtgccag gacgagaccgaggcggacgacgccgcgctcgcgggatgcaagcacgtgttccaccgcgag tgcatactgcagtacggctgcgtcgcggcgtcgccggagagtgggaagaaggtgacgtgc ccggtgtgccgcgtcccgctgacgatcgatttgcaaccgaccgacctctccggggtgccg acgcgcgtcgcgacgtccatcgcggcgaagaaaaaagacgagctccccgcgaagagcatc ttgtcgcgcatcgacctcacgaagtacacgagcagcaccaaggtggagacgctcctgagg gcgcttcgcgagatgcgctcgggcgcggacgggcacctgaacaaggcgatcgtgttctcg cagtacacgtccatgatcgacatcgcggagtggcgtctgaaaaaggaaaagtttgtcgtc gcgaagctgttggggtccatgccggtgacgcaacgcgcggcgaatttgaaagcgttcagg gacgacccgaacgtcagcgtgatcctgatgtcgctcaagtccggcggcgaggggttgaac ttgcaggccgccaactacgtcttcgtgctcgagccgtggtggaaccccgcggtggagatg caggcgcgcgacgcgcccgccggtccgcgcggtttcattttgtatttcacccacccctcg gtgtcaacgtttgaccgcgcggtgatgcgcgcgcatcgcatcggacagagacgcgcggtg accgcggtgcgattttcaacgaagaacaccatagaggagcgcatgatgcagctgcaggag aagaaacggctcgtgttcgaggggtgcatggacgggaaccaggcgagcttgtcgcagctc accgaggaagatttgcagtttttgttcaagcggtga

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