Microbacterium rhizosphaerae: SM116_04355
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Entry
SM116_04355 CDS
T09585
Name
(GenBank) Ig-like domain-containing protein
Organism
mrg
Microbacterium rhizosphaerae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
WPR90531
LinkDB
All DBs
Position
996746..1002694
Genome browser
AA seq
1982 aa
AA seq
DB search
MRRRSAIAALVAGAAVVASIVVVSVVWPGLDAKQTPPTDSAVWALQTGSGRHYARVNTAI
GELDTVRDVANPSAVAQTDDGAFLFSESFGKLTRIDAALPANLDDEALRAAPSTPAGTVE
VATGGRWVAYRTDSGAVWAGALGAAPVQVDAGDTRPLAATAIAVDDGGTLFAYSSASHVV
ERYAIPTAGAIGRDSVPRPPAADAALALTAAHGVWFLADGNAQRVWRRGADAPASVSFVG
DLAPGRAVAQSDAAWIADDAGLVRLPTDGAPPSRAVGGGDRDLGTPARPIVFDGVVHAAW
LGRASGTLWRSDRGESELSYGGVSLSGERRPVFTASAASLILNDTRSGWVWNARTGALLP
SSQDWTLDERRAPQTQQTAEKATVVIDPRPPVAEPDTFGVRAGRLAALPVLLNDHDPNED
VLSVDPASATGLDPRFGTLTVTDNGQRLAVQVAPGAQGSATFSYRVTDGTAQDGGLYSKP
TTVTLTVVGEGVDAAPQWCGVPGCLATWPSPEVAPGGTVSVPVLDGWVDPDGDPLMLVSV
DNPSGVGSVAATPTGRVVYQHPNASDAGPRVVELTVTVADTRGRQATKQLAVRIAGEPRI
TASSFAVTDTQGGGLTVDVAPHVTGTQGHLVLTAVHVLDDAAAQAVPTAGGTTFDLSANA
PGTYRVGYTVSDGVSDASATARITLLPRGAPAQLATAPVVAFVHPTQDVTVDVLAAVANP
THRVLLLSDIRPVAESGESLSVDVVGQRYLRISGNTASGAPGLLGTVRYTVSDGTEDQGA
RIEGEATVSLLPPAPELAPIAVDDTVVVRAGAQVDIPVLDNDVAAAGGTVTLNPASVHSS
TPKALAFASGRMLRYLAPSAPGEYRVDYAIYASGSPALADTATVHVTVISNKDNRAPRPV
TLEGRALAGETTTIPFSSFGVDPDGDAVRLDRVLTQPESGSATLSADGESLVYAGVPGFR
GQVSFTYQVVDSSGMTGTATARVGVLDAEANPSPVTFTDYVDLQAGVDDVAHVSPLANDL
DPTGGTLRLTGVRPSVSQTLSDGSANPEFGREEALLRGRTSSEVDIAAGVAPGTMSYLYD
VQSSTGNTARGLIVVKVVRDAVPDYPVVSDTVLTAQTRSRFSSGVDVVSGKVSWSGGDIR
HLKLSLWGAPDGVVVDGDRLKGAPTAQARVIPFALSGTGSTGETVTTYGFLRIPGVDDLT
IALRADARMPEVTEKGSVTWDMASLVGLPPGARLEVGTDVATSGARAGAVCARGSGAAVR
YDAGEGAPWADACIVPVRIAGEALARRDWTYLSVPIRIRALAPQPELRAAAVVVGPGETA
SYDLKTMTTWQGRTDWDHVAYAVTPPGSSFQVALKGTTLTVTGADTATPGAEDAALIAIT
SHPGVAPARLVLRVGAAPSTLPQGGTATGRCTEAAGSSCTITVVGATGEVNPLPRTPLQV
VAASADAACVGVTFSAVSATSIQASWAQDAPGQTCAATFVLRDAQGRITAGARDGHALLD
LQGYPKPPAAVTQTAYGDGTLTLRVDAGDARLAYPALAGFTIRAQGSVVATCTAAGVCPP
ISAPNGEERTYTATAVNAVGESRGSVSTIAWAYASPGAPADVTAAPVVTSDGTGGIVSLV
IRGIDPTQTGMLQISSPTGDTVQVPVRRNDSTVTVDQYRVGSNALTPVTVTPYSRFGLPP
GLGGSPSGAARTINTNGIGAPLAPRLTLDVTANADDTVDVAATGTASSGGDGSTIRYGIV
RDGQPCAVSTSGSTAVFRSLPAGSRYTFRLCAESWFGGDSFGRVETTASVNAVQTQLPTG
YTFQIAPAPQMSQDLAQWIVRDAPTSSQRVPHNSQPEFDAWPSTVFDRDPGIRVRFVNSV
LGTQSAWVGVTPRAGSAPYQVQARWAVSACTGGSPLGVSTSSTGSLAAVTVDRTAVVYYD
TNGRVLPAASNGDVPVGAARVAGLSVTVDWSAQNWGLAPAAATFGGTCDPNLPSNPTPAP
TP
NT seq
5949 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcggcgcagcgcgatcgccgcgctggtcgcgggtgcggctgtggtcgcatccatc
gtcgtcgtcagcgtggtgtggcccggactcgacgcgaagcagactccgccgaccgacagc
gcggtgtgggcgctgcagaccggatccgggcggcattacgcccgggtcaacacggcgatc
ggcgagctcgacaccgtgcgcgatgtggccaacccctccgcggtcgcgcagaccgacgac
ggggcgttcctcttctccgagagcttcggcaagctgacgcgcatcgatgcggcgctgccc
gcgaacctcgacgacgaggcgctgcgtgcggcgccgtcgacgccggcagggacggtggag
gtcgccaccggcgggcgatgggtcgcctatcgcaccgacagcggcgcggtgtgggcgggc
gcgctcggtgcggcgcctgtgcaggtggatgcgggcgacacgcgcccgctcgccgccacg
gcgatcgccgtcgacgacggcgggacgctgttcgcatactcatccgcatcccatgtcgtc
gagcgctacgcgatcccgaccgccggcgcgatcggccgcgactccgtgccgcgcccgccc
gccgccgacgccgccctcgcgctcacagccgcccacggcgtgtggttcctcgccgacggg
aatgcgcaacgggtctggcggcgcggagcggatgcgccggcatccgtctcgttcgtcggc
gacctcgcacccggccgagccgtcgcgcagtcggacgcggcgtggatcgccgacgacgcg
gggctcgtccggctgccgaccgacggcgccccaccctcgcgcgcggtcggcggcggcgac
cgcgacctcggcacgccggcgcggccgatcgtgttcgacggggtggtgcacgcggcgtgg
ctcgggcgggcatcgggcacactgtggcgatcggatcgcggcgagagcgagctgtcgtac
ggaggagtcagcctctcgggcgagcgtcgacccgtgttcacggcgtcggccgcgagcctc
atcctgaacgacacgcgcagcgggtgggtgtggaacgcgcgcaccggcgccctccttccg
tcgagccaggattggacgctcgacgagcgtcgcgcaccgcagacccagcagactgcggag
aaggcgacggtggtcatcgacccgaggccgccggtggcggagcccgacacgttcggggtc
agggcggggcgcctcgcggcgctgcccgtgctgctcaacgaccacgaccccaatgaggac
gtcctgagcgtcgacccggcgagtgccacgggactcgatccccggttcggcacgctcacg
gtcaccgacaacggccagcgcctcgcggtgcaggtcgcgccgggcgcccaggggagcgcg
accttctcctatcgggtgaccgacggcacggcgcaggacggcggcctgtactcgaagccc
acgacggtcactctcaccgtggtcggcgagggggtggatgcggcgccgcagtggtgcggc
gtgcccgggtgcctcgcgacgtggccgtcgcccgaggtggctcccggcggcacggtgtcg
gtaccggtcctcgacggctgggtggatcccgacggcgacccgctcatgctcgtctcggtg
gacaacccctcgggggtcggctccgtggccgccaccccgaccggcagggtcgtgtatcag
catcccaacgcctccgacgcggggccgcgtgtcgtcgagctcaccgtcacggtcgcagac
acccgcggacggcaggcgaccaagcagctcgctgtgcgcatcgccggagagccccgcatc
accgcgtcctccttcgccgtcaccgatacgcagggcgggggactgacggtggatgtcgcc
ccccacgtgacgggtacgcaggggcatctcgtcctcacggccgtgcacgtgctcgacgac
gccgccgcgcaggccgtgcccaccgcgggcggcacgacgttcgatctctcggcgaatgcg
ccggggacgtaccgtgtcggctacaccgtgtcggacggggtcagcgacgcgagcgccacc
gcgcgcatcaccctgctgccgcggggcgctccggcccagctggcgaccgctcccgtggtg
gccttcgtccacccgacgcaggacgtgaccgtcgacgtcctcgcggcggtggccaacccg
acgcaccgcgtgctgctgctcagcgacatccggcccgtcgcagaatccggtgagagcctg
tcggtggacgtcgtcggtcagcgctacctccgcatctcggggaacaccgcgtcaggcgca
ccgggcctgctgggcaccgtgcggtacaccgtgtccgacggcaccgaggaccagggcgcg
cggatcgagggcgaggcgaccgtgtcgctcctgccgcccgcgccggagctcgcccccatc
gccgtcgacgacaccgtggtcgtccgcgcgggcgcccaggtcgacatccccgtcctcgac
aacgacgtggccgccgcgggcggcacggtgacgctcaatccggcctcggtgcactcgtcg
acgccgaaggcgctcgcgttcgcgtcgggacggatgctgcgctacctcgcgccgagcgca
ccgggggagtaccgcgtcgactacgcgatctacgcatccggttcccccgcgctcgccgac
accgccaccgtgcacgtgacggtcatctcgaacaaggacaaccgtgcacctcgacccgtg
accctcgaggggcgcgcgctcgcgggggagaccacgaccatcccgttctcctcgttcggc
gtcgaccccgatggcgacgccgtgcggctggatcgcgtgctgacccagcccgagagcggg
tcggccacgctgtccgccgacggggaatcgctcgtctatgcgggcgtgcccggcttccgc
ggacaggtgtctttcacctaccaggtcgtcgacagctcgggcatgaccgggaccgcgacg
gctcgcgtcggcgtgctggatgccgaggccaacccgagcccggtgaccttcacggactac
gtggacctgcaggccggcgtggacgacgtcgcccacgtcagcccgctcgcgaacgacctc
gatccgaccggtggaacgctgcgcctcacaggggtgcgtcccagcgtctcgcagaccctc
tccgacggatcggcgaacccggagttcggccgcgaagaggccctgctgcgcggccgcacg
tcgagcgaggtggacatcgccgccggcgtcgcaccgggcacgatgtcttacctctacgac
gtgcagagctcgaccggcaacacggcgcgcggcctcatcgtggtgaaggtggtgcgggat
gcggtgcccgactaccccgtggtctccgatacggtcctcacggcgcagacgcggagccgg
ttctcctcgggtgtcgacgtggtcagcggcaaggtgtcgtggtcgggcggcgacatccgt
cacctcaagctcagcctctggggcgctccggacggcgtcgtcgtggacggcgaccggctc
aaaggtgcgcccaccgcgcaggctcgcgtcatcccgttcgccctcagcggcaccggctcg
accggcgagaccgtcacgacatacgggttcctgcgcatcccgggcgtcgacgacctgacg
atcgcgctgcgcgccgatgcacgcatgcccgaagtgacggagaagggctcggtcacgtgg
gacatggcctcgctcgtcggcctgcccccgggcgcccggctggaggtggggacggatgtc
gcgaccagcggcgcccgcgcgggtgcggtctgcgcccgcggcagcggcgcggccgtccgc
tacgacgccggcgaaggcgcaccgtgggccgatgcctgcatcgttccggtgcggatcgcg
ggcgaggcactcgcccgccgcgactggacgtacctctccgtgccgatccggatccgcgcg
ctcgcgccgcagcccgagctgagggcggcggccgtcgtcgtcggtccgggagagacggcg
agctacgacctcaagaccatgacgacgtggcagggccgtaccgactgggaccacgtcgct
tacgccgtgactccgcccggatcgtcgttccaggtggcgctgaagggcaccacgctcacg
gtcacgggcgccgacaccgcgacgccgggggcggaggatgccgccctcatcgcgatcacg
agccatccgggcgtcgcgcctgcgcggctcgtgcttcgcgtcggggccgcgccgagcacc
ctgccgcagggcggcacggccacaggccgctgcaccgaggcggccggctcgtcgtgcacg
atcacggtcgtcggcgcgaccggcgaggtcaacccactgccgcgcacgccgctgcaggtc
gtggcggcctccgccgatgcggcgtgcgtcggcgtcacgttctcggcggtgtcggcgacc
agcatccaggcgtcgtgggcacaggatgcgccgggccagacctgtgctgcgaccttcgtg
ctgcgcgacgcgcagggccgcatcacggcgggcgcgcgtgacgggcacgcccttctcgat
ctgcagggctatcccaagccgccggccgccgtgacgcagaccgcctacggcgacggcacg
ctcacgctgagggtggatgccggtgacgcgcgcctcgcgtaccctgcgctcgcaggcttc
acgatccgcgcgcagggctcggtcgtggcgacctgtacggcggccggtgtctgcccgccg
atctccgcccccaacggcgaggagcgcacctacacggccacggccgtcaacgcggtcggc
gaatcccgaggcagcgtctccaccatcgcatgggcgtacgcctcgccgggcgcgcccgcc
gatgtgacggccgcaccggtcgtcacgtcggacggcaccggcggcatcgtctccctcgtc
atccgcgggatcgatcccacccagaccggcatgctgcagatatcgagcccgacgggcgat
acggtgcaggtgcccgtgcggcgcaacgactcgaccgtcaccgtggaccagtaccgcgtc
ggctccaacgcactcactcccgtcaccgtgaccccctactcgcggttcggcctgccgccg
gggctcggcggatcgccgtccggcgccgcgcgcaccatcaacacgaacggcatcggagct
cccctcgcaccgcgcctgacgctcgacgtgaccgccaacgcggacgacacggtggacgtc
gcggcgacgggcaccgcttcctcgggcggcgacggctccacgatccgttacggcatcgtg
cgcgacggtcagccgtgcgccgtgtcgacgagcggctcgacggcggtgttccgctcgttg
ccggccggttcgcggtacaccttccggctgtgcgcggagtcctggttcggcggcgactcg
ttcggccgcgtcgagacgaccgcgagcgtcaacgcggtgcagacccagctgcccaccggc
tacaccttccagatcgcgcccgcgccgcagatgtcgcaggacctcgcccagtggatcgtg
cgggatgcgccgacctcgtcgcagcgcgtgccgcacaacagccagccggagttcgacgcg
tggccgtcgacggtcttcgaccgtgacccgggcatccgcgtccggttcgtcaacagcgtc
ctcggcacccagtccgcctgggtcggcgtcaccccgcgtgcgggcagtgcgccgtaccag
gtgcaggcgcgatgggcggtatcggcctgcaccggcggctcgccgctcggcgtctccaca
tcgtcgacgggaagcctcgccgccgtcaccgtggaccggacggccgtcgtgtactacgac
acgaacgggcgggtgctcccggcggcctcgaacggcgacgtcccggtcggcgccgcccgc
gtcgcaggcctgtcggtgacggtcgactggtcggcgcagaactggggcctcgcccccgct
gcggcgaccttcggcggcacgtgcgacccgaacctgccgagcaacccgacccccgcgccg
acgccatga
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