KEGG   Mycobacterium rhodesiae: MycrhN_6018Help
Entry
MycrhN_6018       CDS       T01685                                 

Definition
(GenBank) ATP-dependent DNA ligase I
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mrh  Mycobacterium rhodesiae
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:mrh00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    MycrhN_6018
   03410 Base excision repair
    MycrhN_6018
   03420 Nucleotide excision repair
    MycrhN_6018
   03430 Mismatch repair
    MycrhN_6018
Enzymes [BR:mrh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MycrhN_6018
    6.5.1.6  DNA ligase (ATP or NAD+)
     MycrhN_6018
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     MycrhN_6018
DNA replication proteins [BR:mrh03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    MycrhN_6018
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     MycrhN_6018
DNA repair and recombination proteins [BR:mrh03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     MycrhN_6018
   NER (nucleotide excision repair)
    Other NER factors
     MycrhN_6018
   MMR (mismatch exicision repair)
    Other MMR factors
     MycrhN_6018
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
6088282..6089829
Genome map
AA seq 515 aa AA seqDB search
MQLLDVAAASAEVGASSARLKKIARIADLLRRAGEEDDAKLVAVVVSWLSGELPQRQIGV
GWATLRSLPAAAAQASMTVLDVDARLSEIGAVAGKGSQARRADLVTELFGAATAVEQMFL
RRLLSGELRQGALIGVMADAVAKAADVPAAAVRRAAMLGGALPSVAAAALTAGEAALEQF
TLTVGRPVGPMLAQTATGVADALERLGGTGAFEAKLDGARVQIHRSGDAVSIYTRSLDDV
TARLPEIVEATLALPVTDLIADAEAIALRPDNRPHRFQVTASRFGRSVDIAAARSAQPLS
MFVFDLLHLDGTDLLDLPTSERVAALDEVVPKVHRVDRLITDDVDAATGFLDATLAAGHE
GVMAKSLTAPYEAGRRGAGWLKVKPVHTLDLVVLAVEWGSGRRTGKLSNIHLGARDPESG
EFIMLGKTFKGMTDAMLDWQTARFTELADGPTDGYVVKVRPEQVVEIALDGVQTSSRYPG
GMALRFARVLRYRDDKSPAEVDTIDTVRALHQRGD
NT seq 1548 nt NT seq  +upstreamnt  +downstreamnt
gtgcagcttcttgacgtcgccgccgcgtcggctgaggtcggcgcctcatcggcgcggctg
aagaagatcgccaggatcgccgatctgctgcgccgggccggcgaagaggacgacgccaaa
ctggtcgcggtggtcgtgtcgtggctgtcgggtgagctgccgcaacgccagatcggtgtc
ggctgggcgacgctgcgctcgctgcccgccgccgcggcgcaggcgtcgatgaccgtcctc
gacgtcgatgcccggctcagcgagatcggcgccgttgcgggcaaggggtcacaagcccgc
cgagccgacctcgtcaccgagttgttcggtgcagccaccgctgtcgagcagatgttcctg
cgccgactgctcagtggcgagttgcggcagggcgccctgatcggggtcatggcggatgcg
gtcgccaaggccgccgacgttcccgcggctgcggtccggcgcgcggcgatgctgggcggc
gcgctgccttcggtcgcagcggctgcgctgacagcgggtgaggccgcactggagcagttc
accctcacggtcggcaggcccgtcgggccgatgttggcgcagaccgcgacgggcgtcgcc
gatgccctcgaacgtctcggcggcacaggagctttcgaggcaaaactggacggcgcccgc
gtgcagatccaccgctccggcgatgcggtgtcgatctacacccgcagtctggacgacgtc
acggcgcggctgcccgaaatcgtcgaagccaccctggcgttgccggtcacagacttgatc
gccgatgccgaggccatcgcactgcgccccgacaatcggccgcaccgatttcaggtgacc
gcatcacgcttcgggcgttcggtcgacatcgcggcagcgcgaagtgcccagccgctgtcg
atgttcgtattcgacctgctgcatctcgacggcaccgatctgctcgacctgccgaccagc
gagcgcgtcgccgcgctcgacgaggtcgtgccgaaagtgcaccgcgtcgaccgactgatc
acagacgacgtcgacgccgccacgggtttcctcgacgcgacgctggccgctggccacgaa
ggtgtgatggcgaagtcgttgacggcgccttatgaagcgggtcgccgcggcgctggatgg
ctgaaggtcaagcctgtgcacactctcgatctcgtggtgctcgccgtcgaatggggctcg
ggccggcgcaccggcaaactctccaacatccacctcggcgccagagaccccgagtccggc
gaattcatcatgctcggaaagactttcaaggggatgaccgacgcgatgctggactggcag
accgcccgcttcaccgagcttgccgacggtccgaccgacggctacgtcgtgaaggtgcgg
cccgagcaggtcgtcgagatcgccttggacggcgtgcagacctcctcgcgctatcccggc
ggcatggcgcttcgattcgcgcgtgtgctgagataccgcgacgacaagagcccggccgaa
gtggacaccatcgacaccgtcagagccctgcaccaacgcggcgactag

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