Minicystis rosea: A7982_04280
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Entry
A7982_04280 CDS
T04613
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mrm
Minicystis rosea
Brite
KEGG Orthology (KO) [BR:
mrm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrm03021
]
A7982_04280
Transcription machinery [BR:
mrm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7982_04280
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
SnoaL_2
Sigma70_r4
NTF2
SnoaL_4
SnoaL_3
HTH_23
Sigma70_ECF
DUF4440
Motif
Other DBs
NCBI-ProteinID:
APR78933
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Position
4978047..4979036
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AA seq
329 aa
AA seq
DB search
MSDPTQPAAVRLSEELDQALERHRRELLGYCYRMLGSSFDADDAVQETMVRAWRSFDRFE
GRAALRSWLHRIATNVCLDMLEGRSRRARPMDLGPAGSPEGPPGDPLPESEWVMPVPDGM
VMTTDPAELVSSRQTIRLAFVTALQKLPPRQRAVLLLREVLSWEATEVAELLDTSVASVN
SALQRARATLGNLDVRTDTYQPMGEAQQALLGRYVEAFERFDLDSLVSLLHEDATLSMPP
VPLWLQGPAAIRAWLSGLGSGCRGSRLVPTVANGSPAFGQYRPSGSDGAFEPWALQILEV
HDGKIVGMVSFLDTPRLFPLFGLPARPEP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcccacccaacctgcggccgtgcgcctttcggaagagctcgatcaggctctc
gaacggcaccggcgtgagctcttggggtactgctaccggatgctcgggtcgtcgttcgat
gcggacgacgccgtgcaagagacgatggtccgcgcgtggcggagcttcgatcggttcgag
gggcgcgcggcgttgcgatcgtggctgcatcgcatcgcgaccaacgtgtgcctcgacatg
ctcgagggccgatcgcggcgggcgcggcccatggatctcggaccggcaggctcgccggag
gggccgcccggtgatccgttgcccgagtcggagtgggtgatgcccgtccccgatgggatg
gtgatgacgaccgatccggcggagctcgtctcgtcgcggcagaccattcggctcgcgttc
gtgaccgcgctgcagaagctgccgccgcgccagcgcgccgtgctgctgctgcgcgaggtg
ctctcgtgggaggcgaccgaggtcgcggagctgctcgacacgtccgtcgcttcggtgaac
agcgcgctgcaacgcgcgcgcgcgacgctcgggaacctggacgtgcggaccgatacctat
cagccgatgggagaagcgcagcaagcgctcctcggtcgctacgtggaggcgttcgagcgc
ttcgatctcgattcgctggtgtcgctcctgcacgaggacgcgacgctctcgatgccgccc
gtgcccctgtggttgcaagggccggcggcgatccgcgcgtggctctcggggctcggaagc
gggtgtcgcggatcgcggctcgtgccaacggtggccaatggatcgccggcgttcgggcaa
tatcgaccgagcggctcggacggcgcgttcgagccctgggcgctccagatcctcgaagtg
cacgacggaaagatcgtggggatggtctcgttcctcgacaccccgcggctctttcccctg
ttcggtctgccggcgcggcccgagccgtag
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