Mauremys reevesii (Reeves's turtle): 120399942
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Entry
120399942 CDS
T07797
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
mrv
Mauremys reevesii (Reeves's turtle)
Brite
KEGG Orthology (KO) [BR:
mrv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mrv03021
]
120399942 (SCAF8)
03041 Spliceosome [BR:
mrv03041
]
120399942 (SCAF8)
Transcription machinery [BR:
mrv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120399942 (SCAF8)
Spliceosome [BR:
mrv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120399942 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
RRM_occluded
DUF3525
MCM
Motif
Other DBs
NCBI-GeneID:
120399942
NCBI-ProteinID:
XP_039384144
LinkDB
All DBs
Position
LG3:complement(95057498..95214182)
Genome browser
AA seq
1550 aa
AA seq
DB search
MTDPLLSARCRQYSASACRRRRPPREQALVPERRSGRHLYGPCCARAGLVRARPPGAALA
AAVSAALGSPELRCLEPGCPPYWCPRCLPVQLLRRVPPSRPGQAGPAKPAPQGGKRGEEA
ERGREETETSGPRVPRPLRHPPWRGGPADPERGQPPPRPSPAAISGDEPPGPRLCLNMEA
VKAFNSELYSLNEYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGL
YVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVF
KSEIIQPLLDMAAGIPPPVVTPVLPSTTAAMSNNTPGTPVTPVTPANVVQSLPDPWVSQI
ANTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSLLQALDAGLVVQLQALTAQLTA
AAAAANTLNPLEQNVSFNKKLMDRFDFGEEPDLSEEPKKETPTSQLPLVSESVNNSLFHQ
LAEQLQQQNLEHLRQQLLEQQQPQKASPEENQEGNFGSEHSASPSQGSSQQQFLEVETNL
DDSMDIQQQDMDIDEGQDVVEEEIFEQEEKKSAVRSRSRTHSRSRSRSPRKRRSRSRSGS
RKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVG
QVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYRALQKLSSGSYKIGSK
IIKIAWALNKGVKTEYKQFWDVDLGVSYIPWEKVKLDDLDGFAEGGMIDQETVNTEWETV
RSSEAVKENIQTTQSTTVDKNTAVTTQTEAYTQSVTMLQIPVAPAVPAVSLVPPSFPVTM
SVPPPGYSSIPPPPFLRASFNPSQPPPGFMPPPVPPVPPPVVPPPVVPQGVPTSLVQPPL
SITQETMKDVPFGSLVLPVGTVSSSLATPTLSAGSVFNPLPSNKPESEEKGSHLADVQIS
SSENNRSIQNDVSSSSGLAGGVQPPGVSSSSGRAVGVQPPGVSSSSGRVGGVQPPGVSSS
STLAGGVQPPGVSSSSTLAGGVHPPGVSSSSALVGGVQPPGVSSSSGLLVGVPPPNVSSS
CGLLAGVPPPNVSSSSGLMAGVPPPNVSSSSGLMAGVPPPNVSSSSGLMAGVPPPNVSSS
SGLLAGVPPPNVSSSSGLLIVPPPNVSSSSGLLGMQHPPGIQNIPHLNISSQRMPGMPLL
DLRPGLIPQSPGPRFPLIQPGMPPQRNIPPPTILDPSLHPPPRGPFPPPGDLFNQTERHF
GTPGRQNVDSISNPEKRLPLGGDGIQQEGDRDYRFPPVENRETLNRPSPVDVRDSIGRPP
VDPREGLGRPPIDGREHFARPHIDMRENFGRPGVDNIGRREHFGFNSEKHWGQRGDYDER
EHTVFPIYGGPKSFHEDRERFRHVNYRFDARSGPNWNRGFEQDAHRDFDDRRRPWERQRD
RDDRDFNFCREINGNRFGRDRMQNNWIPPPHPRVFEYFEGATSQRKADNIPQVNGENTET
ESQPPNVQVQNDPELYEKLASSSEINKEKSDTEADIESEPVVESTETEGT
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgacggaccctcttctttctgcccgctgccggcagtactcagcctccgcctgcaggagg
cgcaggcccccaagggagcaggcgcttgtgccagagcgacgttctggccgccacctctat
ggtccctgctgtgcgagggccgggctggtgcgcgcgcgaccgccaggggccgctctggcc
gccgccgtctccgctgctctcggctcccccgagctgcgctgcctggagcccgggtgtccg
ccatattggtgtccgcgctgcctgcctgtgcagctgctgcgccgtgtccctccatctcgt
cccggccaggccgggcccgcgaagccggcgccgcagggcgggaagcggggcgaggaggcc
gagcggggcagggaggagacggaaacgagcgggccacgggtcccgcgccccctgcgccac
ccgccatggcgaggaggcccggcggaccctgagagaggccagccccctccccggcccagc
ccagccgccatcagcggagacgagccgccgggcccccgcctctgcctcaacatggaggcc
gtgaaagcctttaacagcgagttgtactcgctaaatgaatacaaaccacctatttctaag
gctaaaatgacacagatcaccaaggcagcaatcaaggctataaagttctacaaacatgtt
gtacagagcgttgagaaattcattcaaaagtgcaaaccggaatacaaggtgcctggtctc
tatgtcattgactctattgtgcgacagtcccggcatcagtttgggcaagagaaggatgtg
tttgctcctagattcagcaataatatcatcagcactttccagaatttataccgttgtcct
ggggatgacaagagtaaaattgttagagtgctaaatttgtggcagaagaataatgtgttc
aagagtgaaattattcagcctctcctggatatggcagcaggaattcctcctccagttgtg
actccagtcttgcccagtacaacagctgctatgagcaacaatacaccaggaactcctgtg
acccctgttactccagccaatgtggtacaaagtttacctgatccttgggtgtctcaaatt
gctaatacagatacacttgctgctgttgcacaaatcttacagagtccccaaggccaacag
cttcagcagttaatacagacactgcaaatacaacaacagaagccacagccttcactactt
caggcactggatgctggccttgtcgttcagttacaggctctcacagcacaacttacagct
gcagctgctgctgccaacacactcaatccactggaacagaatgtctcttttaacaagaag
ctgatggacaggtttgattttggggaagagcctgacctcagtgaagagcctaaaaaggaa
actcccacttcccaactgcctctagtatcagagtctgtgaacaactcactttttcatcag
ctagctgaacaactgcaacaacaaaatttagaacatctccgacagcagctcctggagcaa
cagcagcctcaaaaggcaagccctgaggaaaatcaagagggaaattttggatcagagcac
tctgcatcaccatcacaagggagtagccaacagcagtttttagaagtggaaacaaaccta
gatgattcaatggatattcaacagcaggacatggatatagatgaaggacaagatgtagtt
gaggaagagatctttgaacaagaagaaaagaaatcagctgttcgttcaagatcaagaaca
cactcaagatctcgttcaaggtcaccaagaaaacggaggtctaggtcacggtctggttcc
cgaaaacgtaaacacagaaaacgttcacgctcaagatcaagagaaaggaagcgaaagtca
tctcggtcatactccagtgaaagaagagctagggaaagggaaaaagaacgccagaaaaag
ggattgcctcctatccggtctaaaacactaagtgtgtgcagtactactctttgggttggt
caagtagacaagaaggccacacagcaagatttaactaatttgttcgaagaatttggacaa
atagaatctattaacatgattcctccaagaggttgtgcatatgtctgcatggttcacaga
caagatgcatatcgtgctcttcagaaacttagttctggatcctacaagattggatctaaa
attattaagattgcttgggctttaaataaaggtgtgaaaacagagtacaagcaattttgg
gatgtggatcttggagtttcgtatataccttgggaaaaagtaaaattggatgatttggat
ggctttgctgaaggaggcatgatcgaccaggagactgtaaatacagaatgggaaactgtg
aggagctcagaggctgttaaagaaaatatccaaactactcagagtacaactgtcgataag
aatacagctgttacaacacagacagaagcttatactcaatccgtaactatgctacagatt
ccggtagctccagctgtgcctgctgttagtttagttccaccatcatttcctgtcacaatg
tctgtcccgcctcctgggtacagttcaattccaccacctcccttcttgcgggcaagtttc
aacccttcacaaccacctcctggttttatgcctcccccggttccacctgtcccaccgcct
gttgttccaccgcctgttgtgccacaaggagtcccaacatctctagtgcagcctcctcta
tccattactcaagagacaatgaaagacgttccttttggtagccttgttttaccagttggc
accgtttctagcagtctagccactccaacattatcagcaggaagtgtttttaaccctctt
ccaagcaacaaaccagagtcagaagaaaaaggatcacatcttgcagacgttcagatttct
tccagtgaaaacaacagatctattcaaaatgatgtctcaagcagctccggacttgcgggt
ggagtgcagccacctggtgtctcaagcagctccggacgtgcagtaggagtgcagccacct
ggtgtctcaagcagctctggacgtgtgggaggagtgcagccacccggtgtctcaagcagt
tccacacttgcgggaggagtgcagccacccggtgtctcaagcagctccacacttgcggga
ggagtgcacccacccggtgtctcaagcagctccgcacttgtaggaggagtgcagccacct
ggtgtctcaagcagctctggacttttggtgggagtgccgccaccgaatgtctcaagcagc
tgcggacttttggcgggagtgccgccaccgaatgtctcaagcagctctggacttatggcg
ggagtgccgccaccgaatgtctcaagcagctctggacttatggcgggagtgccgccacca
aacgtctcaagcagctctggacttatggcgggagtgccgccaccaaatgtctcaagtagc
tctggacttttggcgggagtgccaccaccaaatgtctcaagcagctctgggcttctaata
gtgccaccacccaatgtctcaagtagttctggacttctggggatgcagcatccaccaggg
attcaaaacataccccatttaaatattagtagtcaaaggatgcctggaatgcctctctta
gatctccgtccaggactaataccccagtcacctggaccaagatttccattaatacagcct
ggaatgccaccacagcgtaatatccctcctccaacaatccttgacccatcccttcatcca
ccacctagaggtccttttcctcctccaggagatctttttaaccaaacagagagacatttt
ggaacacctggaagacaaaatgttgatagcatttctaatccagaaaaaaggttaccactt
ggcggtgatggcattcaacaggaaggagaccgagactatcgctttccgccagtggaaaac
agagagactcttaataggccatccccagtcgatgtcagggattctattggacggccacca
gtagatccaagagagggtcttggaagacctccaatagatgggagagaacattttgcaaga
ccgcatatagatatgagagagaattttggaagaccaggtgtggataatattggtcgaaga
gagcattttggtttcaattcagaaaagcactggggacagagaggagattatgatgaaaga
gaacacactgttttccctatctacggtggtcctaaaagcttccatgaagatagagagaga
tttcggcatgtaaattacagatttgatgctagaagtggtcccaactggaataggggattt
gaacaagatgctcacagagattttgatgaccgtagaagaccctgggaaagacagagggat
agggatgacagagattttaatttttgcagagaaataaatggaaacagatttggaagagac
agaatgcagaacaactggatccctcctccacatccaagggtttttgaatattttgaaggg
gccacttcacagcgcaaagctgataatataccccaggtaaatggtgaaaatacagagaca
gaaagtcaaccaccaaatgtgcaagtgcagaatgatccagaactttatgaaaaactagca
tcttcaagtgagataaacaaagagaagagtgacacagaagctgatatagaaagtgaacca
gtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
