Mycobacterium saskatchewanense: MSAS_47170
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Entry
MSAS_47170 CDS
T07413
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
msak
Mycobacterium saskatchewanense
Pathway
msak00020
Citrate cycle (TCA cycle)
msak00190
Oxidative phosphorylation
msak00650
Butanoate metabolism
msak01100
Metabolic pathways
msak01110
Biosynthesis of secondary metabolites
msak01120
Microbial metabolism in diverse environments
msak01200
Carbon metabolism
Module
msak_M00009
Citrate cycle (TCA cycle, Krebs cycle)
msak_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
msak_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
msak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MSAS_47170 (sdhA)
00650 Butanoate metabolism
MSAS_47170 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
MSAS_47170 (sdhA)
Enzymes [BR:
msak01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MSAS_47170 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
BBX65543
UniProt:
A0A1X2CHP5
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Position
complement(4955087..4956841)
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AA seq
584 aa
AA seq
DB search
MIQQHRYDVVIVGAGGAGMRAAVEAGPRVRTAVLTKLYPTRSHTGAAQGGMCAALANVED
DNWEWHTFDTVKGGDYLADQDAVEIMCKEAIDAVLDLEKMGMPFNRTPEGRIDQRRFGGH
TRDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVQFFNEFYALDLVLTQTPSGPVATG
VVAYELATGEIHVFHAKAVVLATGGSGRMYKTTSNAHTLTGDGIGIVFRKGLPLEDMEFH
QFHPTGLAGLGILISEAVRGEGGRLLNGEGERFMERYAPTIVDLAPRDIVARSMVLEVLE
GRGAGPHKDYVYIDVRHLGEDVLESKLPDITEFARTYLGVDPVHELVPVYPTCHYVMGGI
PTTVTGQVLRDNTSTVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAGFAD
GHDFVDMPPDPAAMVVGWVGDILSEHGNERVADIRGALQQSMDNNAAVFRTEETLKQALT
DIHALKDRYSRITVHDKGKRYNSDLLEAIELGFLLELAEVTVVGALNRKESRGGHAREDY
PNRDDVNYMRHTMAYKQGTDLLSDIALDFKPVVQTRYEPKERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
ttgatccagcaacaccgatacgacgtggtgatcgtcggcgcgggcggtgccggcatgcgg
gccgccgtcgaggcggggccccgggtgcggacagcggtgctcaccaagctctaccccacc
cgcagccacaccggcgccgcgcagggcggtatgtgcgcggcgctggccaacgtcgaggac
gacaactgggaatggcacacgttcgacaccgtcaagggtggcgactacctcgccgaccag
gacgccgtggagatcatgtgcaaggaagcgatcgacgcggtgttggacctggagaagatg
gggatgccgttcaaccggacccccgaaggccgcatcgaccagcgccgcttcggcgggcac
acgcgcgaccacggcaaggctccggtgcgccgcgcctgctacgccgccgaccgcaccggc
cacatgatcctgcagaccctctaccagaactgcgtcaagcacgacgtgcagttcttcaac
gagttctacgcgctggacctggttttgacgcagaccccgagtggcccggtggccaccggc
gtggtggcctacgaactggccaccggcgagatccacgtgttccacgccaaggccgtcgtg
ctcgccaccggcggttcgggccgcatgtacaagacgacgtccaacgcccacacgctgacc
ggcgacggcatcggcatcgtgttccgcaagggactcccgttggaggacatggagtttcac
cagttccacccgaccgggctggccggcctgggcatcctgatctccgaggccgtacgcggc
gagggcggccggctgctcaacggcgagggcgagcgcttcatggagcgctacgcgccgacg
atcgtcgacctggcaccgcgcgacatcgtcgcccgctcaatggttttggaagttttggag
ggccgcggcgccggcccgcacaaggactacgtctacatcgacgtccgccacctgggcgag
gatgtgctggagtccaagctgcccgacatcaccgagttcgcccgcacctacctgggtgtg
gacccggtgcacgagctggtcccggtctacccgacctgccactacgtgatgggcggcatc
ccgaccaccgtgacgggacaggtgttgcgggacaacacctccaccgtgccgggcctctac
gcggccggcgagtgcgcgtgcgtgtcggtgcacggcgccaaccggctgggcaccaactcc
ctgctggacatcaacgtcttcggccgccgcgccggcatcgccgccgccggcttcgccgac
gggcacgacttcgtcgacatgccgccggacccggcggccatggtggtcggctgggtgggc
gacatcctctccgagcacggcaacgagcgcgtcgccgatatccgcggcgcgctgcagcag
tcgatggacaacaacgccgccgtcttccgaaccgaggagacgctgaaacaggcgctgacc
gacatccacgcgctcaaggaccgctattcccggatcaccgtgcacgacaagggaaagcga
tacaacagcgacctgctggaggcgatcgaactcggcttcctgctggagctggccgaggtc
accgtggtgggcgcgctgaaccgcaaggagtcccggggcgggcacgcgcgcgaggactac
ccgaaccgcgacgacgtcaactacatgcgccacaccatggcatacaagcagggcaccgac
ctgctcagcgacatcgcgctggacttcaagcccgtcgtgcagacccgctacgaaccgaag
gaacggaagtactga
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