Mycobacteroides salmoniphilum: DSM43276_00910
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Entry
DSM43276_00910 CDS
T06041
Symbol
fpg2
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
msal
Mycobacteroides salmoniphilum
Pathway
msal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
msal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM43276_00910 (fpg2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msal03400
]
DSM43276_00910 (fpg2)
Enzymes [BR:
msal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DSM43276_00910 (fpg2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSM43276_00910 (fpg2)
DNA repair and recombination proteins [BR:
msal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM43276_00910 (fpg2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-TFIIB
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QCH22667
LinkDB
All DBs
Position
912183..913046
Genome browser
AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRHATGTTIARIDVSAFSVLKTFDPPITALYGQTVTGATRWGKYLG
LRVGDLYLITHLSRAGWLRWSDKLAAAPLKPGKGPIALRVHLGTPGDAAGFDLTEAGTQK
RLAVWVVADPATVPQIASLGPDALSLTASGLADILSGTTARLKNVITDQRVIAGIGNAYS
DEILHVAKLSPFASGKALTEGQLTALYEAMQSVLTDAVQRSVGQQAATLKGEKRSGLRVH
ARTGMPCPVCGDVVREVSFADKSFQYCPTCQTGGKVLADRRLSRLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactaccggaagtcgaggcgctcgccgatcacctgcgtcgtcacgccaccggg
accaccatcgcgcgcatcgacgtctcggcgttctcggtgctcaagacctttgatccgccg
atcaccgcgctgtacggccagacggtcaccggcgcgacgcgctggggcaagtacctgggc
ctgcgggttggggacctgtatctgattactcacctgtcgcgagccgggtggctgcgctgg
tcggacaagctggcagcggcgccgctcaagccgggcaagggccccatcgcgctgcgggtt
catcttggaacacctggcgatgcagcgggattcgatctcaccgaggccggcactcagaag
cgtctggcggtgtgggtcgtggcggacccggccaccgtgccgcagatcgcctccttgggg
cccgatgcgctctctctgaccgccagcgggttggccgacatcttgtccggcaccaccgca
cgtctgaagaacgtgatcaccgaccagcgggtgattgccgggatcggcaacgcctacagc
gatgagatcctgcatgtggccaagctgtcccctttcgccagtggaaaggcgctcacggag
ggccaactgacggcgttgtatgaggcaatgcagtcggttctcaccgacgcggtgcaacgc
agtgtggggcaacaggcggcgactctcaagggggagaagcgatccgggctgcgggtgcat
gcccgcaccgggatgccctgcccggtgtgcggcgacgtggtgcgagaggtgtcgttcgcc
gataagtcgttccagtactgcccgacgtgccagaccggcggcaaggtgctggccgaccgt
cggctctcgcggctcctcaaataa
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integrated database retrieval system
