Mycobacteroides salmoniphilum: DSM43276_04185
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Entry
DSM43276_04185 CDS
T06041
Symbol
gerE
Name
(GenBank) Spore germination protein GerE
Organism
msal
Mycobacteroides salmoniphilum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Sigma70_r4_2
HTH_23
HTH_38
AAA_29
Sigma70_r4
HTH_30
Sigma70_ECF
DEAD
AAA_18
NTPase_1
TPR_19
Motif
Other DBs
NCBI-ProteinID:
QCH25899
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Position
4228734..4231112
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AA seq
792 aa
AA seq
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MKVLISGTAGSGKSSILSRVRDVLSNNGSAPVNHVPETAPGGKVGPFVIDDAHCLTDRQL
DTLRAVVENDPGAIVVVAATPRRNPALRALFQALERESPSITLDPVNTGDITRLSPRSAA
HAEEIAAASGGVLALTAAAIDHLSGADPLESALRAIDTRIDEHLRRLSTPAQAAVLLMSL
DAGIGASDIAAALTLSDAEDLLDEALTSGLVPGPGQIAFASRVHGCSARLLGAARHLDLE
RSLLRTQLDIGSVSADLALALVAHGLRDTAIAGLLSDWAATESDPFSAADLYRAALTAGA
DPGPLRVPLAESLARAGDLAAAAAQADQVLTATDPGHRAAAVRIAAAIACHNGDSGQAAA
LYDWLGSDLDSQTALSAAPVFVGIGQLASARKILEDNVGAPPTTSATATRNAALGVIAAA
EDRSQEALSLLGQAVTQQPSTSSFAPDSTVALAALTMLHGGDTARARSILTGAIRTDLPH
DVFAVRHRLLAAWIAMLSGDLGAATQWLPGADAELSRRDRLFAASLRTGIARRHGDTGPL
RQHWQASMDALSAYSIDLYTLLPVGELWVAAARLRTLDAMAHHVDRAFAVLAQLGDPIAW
SAPLRWAGVHAAILTNSPESLAPHGQALAAAAGSSPYARTLATAGRTWLRVLAHQVDGAE
VDTAARMLADAGLGWDATRLASQAALHANDPKVAAAMLALARDLRAPSAATDSPDGTAPP
SSASHSPTSTRLSDREREVAELLLRGLPYRDIGAQLFISAKTVEHHVARIRRRLGAESRS
DMFSMLRAILAT
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtgctcatcagcggcacggcgggcagcggcaaatcgtcgatcctgtctcgggtt
cgggatgtcttgagcaacaacggttcagcgccggtcaaccatgtccccgagacggcgccc
ggcgggaaagtcggcccattcgtcatcgacgatgcccactgtctgaccgaccgccagctc
gacaccctgcgcgctgtcgtggagaacgatccgggggccatcgtggtcgtggccgcgaca
ccccgacgcaatccggccctgcgcgccctctttcaggctctggagcgcgagtcgccctcc
atcacgctagatcccgtcaacacgggtgatatcacccggctttcacctcgctcagccgct
catgccgaggagatcgccgccgcctccggcggtgtgctggcgctgaccgcagcagccatc
gatcatctgagcggggcagatccactcgaatcggcactgcgcgcgatcgatacccgcatt
gacgaacacctgcgccgcctatcgacgccggctcaggccgccgtgctgctgatgtccctg
gacgccggcatcggagcctccgatatcgctgcggcgcttacactttccgatgccgaagat
cttctcgacgaggcactgacgagcggattggttcccggccccggtcagatcgcgttcgcg
tcgagagtgcacgggtgctccgcgcgactactcggagctgcacggcacctcgatcttgag
cgatcgctgttgcgcacacagctcgatatcggttcggtgtccgccgacttggccctggcc
ctggtagcgcacggactgcgcgacacggcgatcgccggcctgttatcagactgggcggca
accgaatccgaccccttcagcgccgccgacctgtaccgggctgccctgacagcaggcgcc
gatccgggcccgctcagggtgccgttggccgagtccctggctcgcgcgggtgacctggcc
gcggccgccgcccaggccgaccaggtgctcaccgccaccgacccgggacatcgcgcggca
gccgtgcgcatcgcggcggccatcgcctgccataacggagactccggtcaggccgcggcc
ttatacgactggctgggttcggatctggacagccagacggccctgtccgcggcgcccgtt
ttcgtcggcatcggccagttggcgagtgcgcggaaaattttggaagacaacgtaggagct
ccaccaacgacatcggccaccgcgacacgaaacgccgcgttgggggtcatcgccgctgcc
gaggaccggagccaggaggcactgtccctgctgggacaggccgtcacgcaacagccatcg
acgtcttccttcgccccggacagcaccgtggcgctcgcggcattgaccatgctgcacggc
ggcgacacggcacgggcccgcagcattctcaccggagcgattcgcaccgacctgccgcat
gacgtcttcgcggtgcggcatcggctgctcgccgcctggatcgcgatgttgtccggcgac
ctgggcgcagccacccaatggctgcccggggccgatgccgaactctcccgccgcgaccgc
ctgttcgccgcatcgctacggacgggcatcgcccgccgtcacggcgacaccggtccgctg
cgtcagcactggcaggcctccatggatgccttgtcggcgtattcgatcgacctctatacg
ctgctgcccgttggtgagctctgggtggccgcggcgcggctacgcaccctggacgcgatg
gcacaccatgtcgaccgcgccttcgcggtgctggcgcagctcggcgatcccatcgcctgg
tccgcgccactgcggtgggcaggggtgcacgcggcgatcctgaccaattcccccgagagc
ctcgctccgcacgggcaggcgcttgccgcggccgcgggatccagcccgtacgcgcgcacg
ctggcgaccgccgggcgtacctggctgcgcgtgctcgcccatcaggtggacggcgcagag
gtggacaccgccgcgcggatgctggccgatgccggtctgggctgggatgccacccggttg
gccagccaggccgcgctgcatgcgaacgaccctaaggtggccgccgcaatgctcgcgctg
gcccgcgatctccgggcaccgtcggccgcgaccgacagccccgacgggactgccccgccc
tcctcggcttcacattcgccgacatcgacgcgtctttccgatcgcgagcgcgaggttgcc
gagctgctgctccgcggccttccctatcgcgatatcggtgcgcaactgttcatttcagcg
aagacggtcgagcatcacgtcgcccgcattcgacgtcggctcggcgccgaatcgcgctcc
gacatgttctcgatgctgcgcgcaattctggcgacataa
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