Micropterus salmoides (largemouth bass): 119883298
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Entry
119883298 CDS
T07309
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119883298 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msam03019
]
119883298 (exosc5)
Messenger RNA biogenesis [BR:
msam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119883298 (exosc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
119883298
NCBI-ProteinID:
XP_038549807
LinkDB
All DBs
Position
Unknown
AA seq
219 aa
AA seq
DB search
MEVCSSSNVTLREFGCEQSLLSRPDGSASFIQGDTSVLAGVYGPAEVKVSKEIYDRATLE
VLVQPKVGLPSVKERSQEQCVRETCEASLLMSLHPRSSLTLILQVLHDDGSLLSCSLNAA
CMALMDAGLPMSCLFCGVTCSIDTQGQIITDPTAAQEKESRALMTFAIDSTDNRVMMSST
KGSFSVHELQQCIVVSQKASEKIFQFYRDSIRRRYSKTL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtgcagctcttcaaatgttactttgagagagtttggttgtgaacagagttta
ctgtctcgacctgacggttcagcgtccttcatccaaggagacacaagtgtattggctgga
gtgtacggaccagctgaggtcaaagtcagcaaggaaatctatgaccgggcaacactggag
gtgttggtacagcccaaagtgggactgccaagtgtaaaggagcgttcacaagagcagtgt
gtgcgagaaacgtgtgaggcgtctctgctcatgtcacttcatcctcgctcctccctcact
ctcattcttcaggtgttacatgatgatggttcactcttgtcttgctcgttgaacgctgcc
tgtatggctcttatggatgcaggcctgcctatgagttgcttgttctgtggagtgacctgt
tccatcgacacacaaggtcaaattatcacagaccccactgcagctcaggaaaaggaaagt
cgagctttgatgacttttgctattgacagtacagacaacagagtaatgatgtcatcaacc
aaaggatcgttttcggttcatgagctgcagcagtgtatagtagtcagtcagaaagcatca
gagaagatcttccagttctacagagactctatcaggcggcgatactccaaaaccctctga
DBGET
integrated database retrieval system