KEGG   Micropterus salmoides (largemouth bass): 119883298
Entry
119883298         CDS       T07309                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    119883298 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msam03019]
    119883298 (exosc5)
Messenger RNA biogenesis [BR:msam03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     119883298 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 119883298
NCBI-ProteinID: XP_038549807
LinkDB
Position
Unknown
AA seq 219 aa
MEVCSSSNVTLREFGCEQSLLSRPDGSASFIQGDTSVLAGVYGPAEVKVSKEIYDRATLE
VLVQPKVGLPSVKERSQEQCVRETCEASLLMSLHPRSSLTLILQVLHDDGSLLSCSLNAA
CMALMDAGLPMSCLFCGVTCSIDTQGQIITDPTAAQEKESRALMTFAIDSTDNRVMMSST
KGSFSVHELQQCIVVSQKASEKIFQFYRDSIRRRYSKTL
NT seq 660 nt   +upstreamnt  +downstreamnt
atggaggtgtgcagctcttcaaatgttactttgagagagtttggttgtgaacagagttta
ctgtctcgacctgacggttcagcgtccttcatccaaggagacacaagtgtattggctgga
gtgtacggaccagctgaggtcaaagtcagcaaggaaatctatgaccgggcaacactggag
gtgttggtacagcccaaagtgggactgccaagtgtaaaggagcgttcacaagagcagtgt
gtgcgagaaacgtgtgaggcgtctctgctcatgtcacttcatcctcgctcctccctcact
ctcattcttcaggtgttacatgatgatggttcactcttgtcttgctcgttgaacgctgcc
tgtatggctcttatggatgcaggcctgcctatgagttgcttgttctgtggagtgacctgt
tccatcgacacacaaggtcaaattatcacagaccccactgcagctcaggaaaaggaaagt
cgagctttgatgacttttgctattgacagtacagacaacagagtaatgatgtcatcaacc
aaaggatcgttttcggttcatgagctgcagcagtgtatagtagtcagtcagaaagcatca
gagaagatcttccagttctacagagactctatcaggcggcgatactccaaaaccctctga

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