KEGG   Micropterus salmoides (largemouth bass): 119889111
Entry
119889111         CDS       T07309                                 
Symbol
spata5
Name
(RefSeq) ATPase family protein 2 homolog
  KO
K14575  AAA family ATPase
Organism
msam  Micropterus salmoides (largemouth bass)
Pathway
msam03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:msam00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    119889111 (spata5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:msam03009]
    119889111 (spata5)
Ribosome biogenesis [BR:msam03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    119889111 (spata5)
SSDB
Motif
Pfam: AAA AAA_lid_3 RuvB_N AAA_5 AAA_16 TIP49 AAA_22 AAA_2 RNA_helicase AAA_28 AAA_14 Mg_chelatase AAA_33 nSTAND3 AAA_18 AAA_7 Rad17 AAA_3 Parvo_NS1 ATPase IstB_IS21 TsaE bpMoxR AAA_24 DUF5906 CDC48_2 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 119889111
NCBI-ProteinID: XP_038555901
LinkDB
Position
Unknown
AA seq 903 aa
MSSKKNKSKSKKASDGESSLVLKEGSNDFSNLQTSGHEGGSCKSLNSSSFTVIDFIEKAD
DKTPKCCRSTLAQLSLNSMKSASVCIGRPVLLTSPTGQQEVCLGWPVASFPGGKVGLQKC
AQNNLRVKSGDEVMLHPLTGPVLQAEEVVLYNRSKDDTVETDEFKNFFLRSLVGNIILPG
SVISLSYFGRSCSFRVETIRGEDGVTLHRPAPPPGLGPDTEESSVMNSVADSTSADLSLQ
LSLLTVDDNNADGAPSTSGEPGPTASTPCRPAHIPSLSSPPGPYTLSYNSQNPPVGSAED
AVSLEGSVSAEQAEKIPTAPSGGAQSSDIFYCLSCSTKVSFRDKAGQEHPDSGAQRSKVT
YSMIGGLSSHLDVIRETIELPLKHPELFSKYGIPPPRGILLYGPPGTGKTMIGRAIANEI
GAHMTVINGPEIMSKFYGETEARLRQIFTEASQRQPAIIFIDELDALCPKREGAQNEVEK
RVVASLLTLMDGIGSEGHSGQLLVLGATNRPHALDPALRRPGRFDKELEVGVPGAGERAD
ILQKQLGFVPCSATTEELTQLADAAHGYVGADLAAVCKEAGLHALRRALEASQQPSDQQL
TGTVTVTLQDLQWAMSVVKPSAMREVAIDVPKVRWSDVGGMEEVKLKLKQAVEWPLRHPE
AFTRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELLSKYVGESERAVRE
VFRKARAVAPSIVFFDEIDALASERGSSSGSGAVGDRVLAQLLTEMDGIEQLRDVTVLAA
TNRPDMIDKALMRPGRLDRIVYVPLPDAPTRLEIFSLQFRNMPVAQNVSLDDLVTRTNKY
SGAEITAVCREAALLALQEDIKAQHIEARHFESALNTVKPRIPDSLIQSYISYQQQHSGL
CFF
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgtcttcaaagaaaaataaaagcaaatcgaaaaaagcgagtgacggggagagttcactc
gtactgaaggagggctccaatgacttctccaacctgcaaacatccggccacgaaggagga
agctgcaaaagtttaaacagcagctcattcactgtcatcgatttcattgaaaaagctgat
gacaaaacacccaaatgttgcagatcaactttagcccaactgagcctcaactcaatgaag
tcagccagcgtatgcattgggagaccagtcctactgacgagtcccacgggacaacaagag
gtgtgtttaggatggccggttgcctcctttcctggtggaaaagttggccttcagaaatgt
gctcagaataacctccgagtgaagtcaggggatgaggtgatgctgcacccactaacagga
cctgtgcttcaggctgaggaggtggttctctataacaggtcaaaagatgacacagttgag
acagatgagttcaagaacttctttctgaggtctctggttgggaacatcattttgcctgga
agtgtcatctccctgtcctactttggccggtcatgcagtttccgggttgagaccataaga
ggggaggacggtgtcaccctccacagaccagctcctcctccaggactgggccctgacaca
gaagaatcctccgtgatgaactcggtagcggactccacgtcagccgacctctcgctgcag
ctcagcttgctcactgtggatgacaacaatgctgacggggcaccaagcacatctggagag
cccgggcctacagccagcacaccatgccgaccagcgcacatcccttctctctcctcaccc
cctggtccctatactctttcatacaactcccagaatcctcctgtaggatcagcagaggat
gctgtcagtctggagggctctgttagcgcagagcaagcagagaaaatccccacagcgccc
tctggtggtgcacaaagtagtgacatcttttactgtctttcctgctccactaaagtcagt
ttcagagacaaagcaggacaggagcatccggattcaggagctcaaaggtcaaaggtcaca
tacagtatgattggtgggctcagcagccatttggatgtcatcagagagactattgagctt
cctctgaaacacccagagctgttctccaagtatgggatcccacctccccgaggaatactt
ttgtatggtccccctggcacaggaaagactatgattggacgagccatagccaatgagatt
ggagctcacatgacggtgatcaatggcccagagatcatgagcaaattctatggtgaaaca
gaagcaaggctgagacagatattcactgaggcatctcagagacaacctgcaataatcttt
attgatgagctggatgctttgtgcccaaagcgagagggagcgcagaatgaggtggagaaa
cgagtcgttgcttctctcctgactctgatggacgggatcggttcagagggtcactcaggt
cagctgttggtccttggggccacaaaccggcctcatgccctcgaccccgccctgcgccga
ccaggacgatttgacaaggaactagaggtgggagttcctggtgctggcgagcgtgcagat
attttgcagaagcagctgggttttgtaccgtgcagtgccaccaccgaagagctgacgcag
ctggccgacgccgcccatggatacgtaggagcagaccttgcagctgtttgcaaagaagca
ggtttgcatgcactgaggcgagcactagaagcttcccaacaaccgtcagaccagcagctg
accgggacagtgaccgtcactctacaggacctccagtgggccatgtctgttgtgaagcca
agcgccatgagggaggtggctattgatgtccccaaggtccgctggtcagatgttggtggg
atggaggaggtgaaactgaaactgaagcaggctgtggagtggcccctaaggcaccctgag
gccttcactcgcatggggatccagccacctaaaggagtcctgctctatgggccaccaggc
tgctccaagactatgatagccaaggcccttgctaatgaaagtgggctcaacttcctggct
attaaaggtccagaattactgagcaagtatgttggagagtctgaaagagccgtgagagag
gtgtttcggaaggcaagggctgtcgctccctccatcgtgttctttgatgagattgatgct
ctcgccagtgaaagaggaagctcctcgggctccggcgctgtaggggaccgcgtcctggct
cagctcctgacagagatggacggcatcgagcagctccgagatgtcactgtgctggccgcc
accaaccggccggacatgattgataaggctctgatgcgtccaggtcgccttgatagaatc
gtctatgtgcctcttccagatgctccaacccgacttgagatattttccctccagttccgc
aacatgcctgtggctcaaaatgtgtctcttgatgacctggtgactcggaccaataagtat
tctggagcagagataacagcagtatgcagggaggctgccctcctggccctacaagaggac
atcaaagctcagcatatcgaggccagacactttgaaagtgccctgaacactgtgaagccc
cggattcccgactctctcatccagtcgtatatcagctatcagcagcaacacagcggcctg
tgcttcttctga

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