Micropterus salmoides (largemouth bass): 119889111
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Entry
119889111 CDS
T07309
Symbol
spata5
Name
(RefSeq) ATPase family protein 2 homolog
KO
K14575
AAA family ATPase
Organism
msam
Micropterus salmoides (largemouth bass)
Pathway
msam03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119889111 (spata5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msam03009
]
119889111 (spata5)
Ribosome biogenesis [BR:
msam03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
119889111 (spata5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
TIP49
AAA_22
AAA_2
RNA_helicase
AAA_28
AAA_14
Mg_chelatase
AAA_33
nSTAND3
AAA_18
AAA_7
Rad17
AAA_3
Parvo_NS1
ATPase
IstB_IS21
TsaE
bpMoxR
AAA_24
DUF5906
CDC48_2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
119889111
NCBI-ProteinID:
XP_038555901
LinkDB
All DBs
Position
Unknown
AA seq
903 aa
AA seq
DB search
MSSKKNKSKSKKASDGESSLVLKEGSNDFSNLQTSGHEGGSCKSLNSSSFTVIDFIEKAD
DKTPKCCRSTLAQLSLNSMKSASVCIGRPVLLTSPTGQQEVCLGWPVASFPGGKVGLQKC
AQNNLRVKSGDEVMLHPLTGPVLQAEEVVLYNRSKDDTVETDEFKNFFLRSLVGNIILPG
SVISLSYFGRSCSFRVETIRGEDGVTLHRPAPPPGLGPDTEESSVMNSVADSTSADLSLQ
LSLLTVDDNNADGAPSTSGEPGPTASTPCRPAHIPSLSSPPGPYTLSYNSQNPPVGSAED
AVSLEGSVSAEQAEKIPTAPSGGAQSSDIFYCLSCSTKVSFRDKAGQEHPDSGAQRSKVT
YSMIGGLSSHLDVIRETIELPLKHPELFSKYGIPPPRGILLYGPPGTGKTMIGRAIANEI
GAHMTVINGPEIMSKFYGETEARLRQIFTEASQRQPAIIFIDELDALCPKREGAQNEVEK
RVVASLLTLMDGIGSEGHSGQLLVLGATNRPHALDPALRRPGRFDKELEVGVPGAGERAD
ILQKQLGFVPCSATTEELTQLADAAHGYVGADLAAVCKEAGLHALRRALEASQQPSDQQL
TGTVTVTLQDLQWAMSVVKPSAMREVAIDVPKVRWSDVGGMEEVKLKLKQAVEWPLRHPE
AFTRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELLSKYVGESERAVRE
VFRKARAVAPSIVFFDEIDALASERGSSSGSGAVGDRVLAQLLTEMDGIEQLRDVTVLAA
TNRPDMIDKALMRPGRLDRIVYVPLPDAPTRLEIFSLQFRNMPVAQNVSLDDLVTRTNKY
SGAEITAVCREAALLALQEDIKAQHIEARHFESALNTVKPRIPDSLIQSYISYQQQHSGL
CFF
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaaagaaaaataaaagcaaatcgaaaaaagcgagtgacggggagagttcactc
gtactgaaggagggctccaatgacttctccaacctgcaaacatccggccacgaaggagga
agctgcaaaagtttaaacagcagctcattcactgtcatcgatttcattgaaaaagctgat
gacaaaacacccaaatgttgcagatcaactttagcccaactgagcctcaactcaatgaag
tcagccagcgtatgcattgggagaccagtcctactgacgagtcccacgggacaacaagag
gtgtgtttaggatggccggttgcctcctttcctggtggaaaagttggccttcagaaatgt
gctcagaataacctccgagtgaagtcaggggatgaggtgatgctgcacccactaacagga
cctgtgcttcaggctgaggaggtggttctctataacaggtcaaaagatgacacagttgag
acagatgagttcaagaacttctttctgaggtctctggttgggaacatcattttgcctgga
agtgtcatctccctgtcctactttggccggtcatgcagtttccgggttgagaccataaga
ggggaggacggtgtcaccctccacagaccagctcctcctccaggactgggccctgacaca
gaagaatcctccgtgatgaactcggtagcggactccacgtcagccgacctctcgctgcag
ctcagcttgctcactgtggatgacaacaatgctgacggggcaccaagcacatctggagag
cccgggcctacagccagcacaccatgccgaccagcgcacatcccttctctctcctcaccc
cctggtccctatactctttcatacaactcccagaatcctcctgtaggatcagcagaggat
gctgtcagtctggagggctctgttagcgcagagcaagcagagaaaatccccacagcgccc
tctggtggtgcacaaagtagtgacatcttttactgtctttcctgctccactaaagtcagt
ttcagagacaaagcaggacaggagcatccggattcaggagctcaaaggtcaaaggtcaca
tacagtatgattggtgggctcagcagccatttggatgtcatcagagagactattgagctt
cctctgaaacacccagagctgttctccaagtatgggatcccacctccccgaggaatactt
ttgtatggtccccctggcacaggaaagactatgattggacgagccatagccaatgagatt
ggagctcacatgacggtgatcaatggcccagagatcatgagcaaattctatggtgaaaca
gaagcaaggctgagacagatattcactgaggcatctcagagacaacctgcaataatcttt
attgatgagctggatgctttgtgcccaaagcgagagggagcgcagaatgaggtggagaaa
cgagtcgttgcttctctcctgactctgatggacgggatcggttcagagggtcactcaggt
cagctgttggtccttggggccacaaaccggcctcatgccctcgaccccgccctgcgccga
ccaggacgatttgacaaggaactagaggtgggagttcctggtgctggcgagcgtgcagat
attttgcagaagcagctgggttttgtaccgtgcagtgccaccaccgaagagctgacgcag
ctggccgacgccgcccatggatacgtaggagcagaccttgcagctgtttgcaaagaagca
ggtttgcatgcactgaggcgagcactagaagcttcccaacaaccgtcagaccagcagctg
accgggacagtgaccgtcactctacaggacctccagtgggccatgtctgttgtgaagcca
agcgccatgagggaggtggctattgatgtccccaaggtccgctggtcagatgttggtggg
atggaggaggtgaaactgaaactgaagcaggctgtggagtggcccctaaggcaccctgag
gccttcactcgcatggggatccagccacctaaaggagtcctgctctatgggccaccaggc
tgctccaagactatgatagccaaggcccttgctaatgaaagtgggctcaacttcctggct
attaaaggtccagaattactgagcaagtatgttggagagtctgaaagagccgtgagagag
gtgtttcggaaggcaagggctgtcgctccctccatcgtgttctttgatgagattgatgct
ctcgccagtgaaagaggaagctcctcgggctccggcgctgtaggggaccgcgtcctggct
cagctcctgacagagatggacggcatcgagcagctccgagatgtcactgtgctggccgcc
accaaccggccggacatgattgataaggctctgatgcgtccaggtcgccttgatagaatc
gtctatgtgcctcttccagatgctccaacccgacttgagatattttccctccagttccgc
aacatgcctgtggctcaaaatgtgtctcttgatgacctggtgactcggaccaataagtat
tctggagcagagataacagcagtatgcagggaggctgccctcctggccctacaagaggac
atcaaagctcagcatatcgaggccagacactttgaaagtgccctgaacactgtgaagccc
cggattcccgactctctcatccagtcgtatatcagctatcagcagcaacacagcggcctg
tgcttcttctga
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integrated database retrieval system